Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g03209 CAACATCAACAACATCAAAACCTTTGTTCAAGGAAAAGATAAAACCAAACATCATGGGATCCCAAACACAATCTCATCTACCACTTATAGATTTCACAAACCAAAATCTCAAACCGGGCACCAAGACATGGGTTTCAGCATGCCAAGCAATGCGTAGTGCACTTGAGGATCAAGGTGGGTTCTTGGCACTATATGATAGAGTCAATTTGGAGACATATGATTCTGTTTACTCAGAAATGAAGAATCTTTTTGACCTCTCTATAGAAACAAAACGGAGGAAAACCACTGAAAAACCCATCTTTTGTTACTCTGGGCAACGACCTGGGATTCCTTTGTATGAATCCGTGGGTATCATCAACCCACTTAGCTTTCAGGACTGTCAGAACTACACACACGTTTTATGGCCACAAGGAAATGATCGTTTCTGTGAAAGTGTCAACTCCTATGCCAAGCAACTACTGGAATTGGACCATATTGTGAAGAGAATGATATTTGATAGCTATGGATTAGAGAAGAAGAAATATGAGTATTTACTTGAATCAACCGATTATGTGCTTCGAGGGTACAAATATAGAACACCCCAAGTGGGTGAGAGCAATGTGGGAGTGGCTCCTCATTCTGACACATCTTTGCTAACTATACTGAATCAGAAGATTGAAGGTTTAGGGGTCAAATTGAAGGATGGGGAATGGTTTGAGGTGGGTGCTTCACCCTCGTTGTATTTGGTCATTGGTGGTGATGCATTGATGGTTTGGAGTAATGATAGGATACCAGCATGTGAGCACAGAGTTATAATAAACTCAAAGACAGATAGATACTCCATGGGACTACTTTCATATGCTGCTAAGATAATGGAACCACAAGAGGAGCTAGTTGATGAGGAACATCCTCTATGTTATAAACCATTTGACCATTATGGATACCTTCGTTTCTTTCTCACTGAAGAAGCCATCAAATCAAATTCTAGGATCAAAGCATTTTGTGGTATTTGAAACACATGTTGTGTGTGAATTGTTGAGTGCCATGTTTCCAATTATGTAAGTAATGACCACTGGTGTGTTT 1062 0.3983 MGSQTQSHLPLIDFTNQNLKPGTKTWVSACQAMRSALEDQGGFLALYDRVNLETYDSVYSEMKNLFDLSIETKRRKTTEKPIFCYSGQRPGIPLYESVGIINPLSFQDCQNYTHVLWPQGNDRFCESVNSYAKQLLELDHIVKRMIFDSYGLEKKKYEYLLESTDYVLRGYKYRTPQVGESNVGVAPHSDTSLLTILNQKIEGLGVKLKDGEWFEVGASPSLYLVIGGDALMVWSNDRIPACEHRVIINSKTDRYSMGLLSYAAKIMEPQEELVDEEHPLCYKPFDHYGYLRFFLTEEAIKSNSRIKAFCGI 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g03209 312 FunFam Probable 2-oxoglutarate-dependent dioxygenase AOP1.2 2 299 - -
Pste4g03209 312 Gene3D - 1 301 IPR027443 -
Pste4g03209 312 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 9 290 - -
Pste4g03209 312 SUPERFAMILY Clavaminate synthase-like 7 297 - -
Pste4g03209 312 Pfam 2OG-Fe(II) oxygenase superfamily 178 257 IPR044861 -
Pste4g03209 312 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 163 269 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g03209 Pste-Chr4 23814227 23818400 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g03209 3 283 Glycosyltransferase AT5G59530 25.503 5.41e-13 67.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g00059 5 521789 523639 Pste4g03209 4 23814227 23818400 PCT