Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g03022 AGAACATCATATCATATCATCAACAGAGAAGATTAGAACAAAAGAGACACACTAGGTAGCCACAGCAGAGCAAGGAACAAGAAGATCGACACAGAGCAACATCATAACATCAATATCATCGAAGACAAAAACATCAAAGGATTGAATTTGAATTTGAATTTGAAATTGAAAATTTTCGAGAATCCGCTGGCTATGAGTGCAGCCGTGGTCGTCCCATTGGGCCTTCTCTTCTTCTCTTCTGGTCTCATTGTTAACCTCATTCAGGCGATATGCTACGTGGTTGTGCGGCCGGTGTCGAAGAGTTTGTACCGGCGGATGAACAGGGTGGTGGCTGAGCTGCTGTGGTTGGAACTTGTGTGGATTATTGATTGGTGGGCTGGTGTTAAGGTCCAAGTATTCACAGATTGTGAAACCTTTCGTTCAATGGGTAAAGAGCATGCTCTTGTCATATCCAATCACAAAAGTGACATTGATTGGCTTGTTGGATGGGTTTTAGCACAGCGTTCAGGTTGCCTTGGAAGCACTCTTGCTGTGATGAAGAAATCATCAAAGTTTCTACCAGTCATTGGTTGGTCAATGTGGTTTTCTGAATATCTTTTCCTGGAGAGAAGTTGGGCCAAGGATGAACGTACCTTAAAGTCAGGCTTACAACAATTGAGGGATTTCCCTCTTCCCTTTTGGTTGGCTCTCTTTGTAGAAGGAACTCGATTTACACAGGCCAAACTATTAGCTGCTCAGGAGTATGCAGCCTCTGCTGGATTGCCTGTTCCTAGAAATGTTTTGATTCCAAGAACAAAGGGTTTTGTTTCGGCAGTAAATCATATGCGCTCATTTGTTCCTGCCATTTATGATGTAACGGTGGCAATTCCCAAAAGTTCCCCTGCTCCTACAATGCTAAGACTCTTTAGAGGGAAATCTTCAGTGGTGAGCCAATAA 936 0.4327 MSAAVVVPLGLLFFSSGLIVNLIQAICYVVVRPVSKSLYRRMNRVVAELLWLELVWIIDWWAGVKVQVFTDCETFRSMGKEHALVISNHKSDIDWLVGWVLAQRSGCLGSTLAVMKKSSKFLPVIGWSMWFSEYLFLERSWAKDERTLKSGLQQLRDFPLPFWLALFVEGTRFTQAKLLAAQEYAASAGLPVPRNVLIPRTKGFVSAVNHMRSFVPAIYDVTVAIPKSSPAPTMLRLFRGKSSVVSQ 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g03022 247 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 80 216 - -
Pste4g03022 247 PANTHER 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED 6 244 - -
Pste4g03022 247 CDD LPLAT_LCLAT1-like 55 245 - -
Pste4g03022 247 Pfam Acyltransferase 73 225 IPR002123 GO:0016746
Pste4g03022 247 SMART plsc_2 83 205 IPR002123 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g03022 Pste-Chr4 21619638 21629806 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g03022 1 245 Miscellaneous Gene Families AT3G57650 81.633 7.65e-152 426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g03022 4 21619638 21629806 Pste4g03022 4 21619638 21629806 ECH
Pste5g00368 5 2432966 2442000 Pste4g03022 4 21619638 21629806 PCT