Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02964 CAAAAATTTCAACTTTCAAATTTTAAATTCCGCCTTAATCTTAGGGACCCCTCAAATCCCTGTTCAGCCTTCTTTTATAAAACACAAACACTCCTCATTTCCACAGACAAGGGTTTACTTTCACAGTTGAATCCTTTTCTGCACTTCCGCTCTCTCTAGTACCACTCCCTTTTCAAGGATAAGGATTCACCTTCAAACCCCAAAATGCGTGAGATTCTTCACATTCAGGGAGGGCAATGCGGGAACCAGATCGGGGCGAAGTTCTGGGAGGTGATTTGCGCGGAGCACGGTATCGACCCGACGGGAAGGTATCAAGGGGACAACGAGTTGCAACTGGAGCGACTGAACGTGTACTACAATGAAGCGAGTTGCGGAAGATTTGTTCCAAGAGCGGTGCTGATGGATCTGGAGCCTGGTACCATGGACAGTGTCAGATCTGGTCCCTATGGTCAGATCTTCAGGCCCGACAACTTCGTCTTCGGACAGTCCGGTGCCGGTAACAACTGGGCCAAGGGTCACTACACCGAAGGGGCTGAGTTGATTGACTCCGTCCTCGACGTCGTCCGCAAGGAGGCTGAGAACTGTGACTGCCTTCAAGGCTTTCAGGTTTGTCACTCTCTAGGCGGTGGTACGGGTTCTGGTATGGGCACTCTTTTGATCTCTAAGATCAGGGAAGAGTATCCTGATCGAATGATGCTTACATTCTCCGTCTTCCCATCTCCTAAGGTTTCAGACACTGTTGTCGAACCTTATAATGCAACACTATCCGTCCACCAGCTTGTTGAGAATGCAGATGAATGTATGGTTTTGGATAACGAAGCTCTTTATGATATCTGCTTCCGCACCCTTAAGCTCACCACCCCAAGCTTTGGAGATTTGAACCATCTAATTTCAGCCACCATGAGTGGCGTGACATGCTGTCTTCGATTCCCTGGTCAACTCAACTCAGATCTTCGCAAACTTGCCGTGAATCTCATTCCCTTCCCTCGTTTGCATTTCTTCATGGTGGGATTTGCCCCTCTCACTTCTCGTGGATCCCAGCAGTACAGGGCCCTCACTGTACCTGAATTGACCCAACAAATGTGGGATGCTAAGAACATGATGTGTGCCGCTGACCCTCGCCATGGTCGTTATTTGACAGCTTCTGCGATGTTCCGGGGTAAGATGAGCACCAAGGAGGTTGATGAGCAGATGATCAATGTTCAGAACAAGAATTCATCCTATTTTGTGGAATGGATCCCCAACAATGTGAAATCCACCGTCTGTGATATCCCTCCAACCGGGCAATGCGGGAACCAGATCGGGGCGAAGTTCTGGGAGGTGATTTGCGCGGAGCACGGTATCGACCCGACGGGAAGGTATCAAGGGGACAACGAGTTGCAACTGGAGCGACTGAACGTGTACTACAATGAAGCGAGTTGCGGAAGATTTGTTCCAAGAGCGGTGCTGATGGATCTGGAGCCTGGTACCATGGACAGTGTCAGATCTGGTCCCTATGGTCAGATCTTCAGGCCCGACAACTTCGTCTTCGGACAGTCCGGTGCCGGTAACAACTGGGCCAAGGGTCACTACACCGAAGGGGCTGAGTTGATTGACTCCGTCCTCGACGTCGTCCGCAAGGAGGCTGAGAACTGTGACTGCCTTCAAGGTCTGAAGATGGCGTCTACCTTCATTGGCAATTCTACTTCAATTCAGGAAATGTTCCGGAGGGTGAGTGAGCAATTCACGGCTATGTTCCGCAGAAAGGCTTTCTTGCACTGGTACACCGGAGAGGGTATGGATGAAATGGAGTTTACTGAGGCTGAAAGTAACATGAACGACCTTGTCTCTGAGTACCAACAATATCAAGATGCCACTGCTGAGGATGAGGACTATGAATACGAAGACGAGGACCCTCAGGAAGAGGAGGAGGCTTGCTGAGGACGGGGACTATGAATACGAAGACGATGACCCTCAGGAAGAGGAGGAGGCTTAAACAGTAGTGTCAGTGTTGTCTTTCTCTGTCAATGTTATGTTTTTTATCCCACCCTTGACCTGAATACCTTTTTCGGGGTTTTGGATTGTATTGGGGGACTTTCTCTGTCTTGCGCTGGTAGTTTAGCGATTTATTTCCTTTTTCTGCAAGTTTTTGTTATTGTTAACATGGTGCCTTTTTTATAATATTTGGGACTTTAAAACTTCTGTGATATATTCATGCTATAGTTTTGGATTTCAATCTTCATGTAGGGTCTTGATCATTGCACTGCATGTTTGAATTGTGATTGTTCTTTGATTTCTGATTTTTGCTAAGATTTGGCTTGGGCCACGGTTTAAATTAGTTATCTTTTATAATACTAATCCACTGAAAATGCTTGTGTTTAAGTAAACAATTTATTTATTTCAAC 2384 0.4723 MREILHIQGGQCGNQIGAKFWEVICAEHGIDPTGRYQGDNELQLERLNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTGQCGNQIGAKFWEVICAEHGIDPTGRYQGDNELQLERLNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEDEDYEYEDEDPQEEEEAC 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02964 571 MobiDBLite consensus disorder prediction 549 571 - -
Pste4g02964 571 FunFam tubulin beta-4A chain isoform X5 353 486 - -
Pste4g02964 571 Gene3D Tubulin/FtsZ, GTPase domain 1 265 IPR036525 -
Pste4g02964 571 SMART Tubulin_4 47 244 IPR003008 GO:0005525
Pste4g02964 571 SUPERFAMILY Tubulin C-terminal domain-like 244 361 IPR008280 -
Pste4g02964 571 Pfam Tubulin/FtsZ family, GTPase domain 360 491 IPR003008 GO:0005525
Pste4g02964 571 Pfam Tubulin/FtsZ family, GTPase domain 3 211 IPR003008 GO:0005525
Pste4g02964 571 ProSitePatterns Tubulin subunits alpha, beta, and gamma signature. 140 146 IPR017975 GO:0005525|GO:0005874|GO:0007017
Pste4g02964 571 SMART Tubulin_C_4 246 389 IPR018316 -
Pste4g02964 571 CDD beta_tubulin 2 548 - -
Pste4g02964 571 PRINTS Tubulin signature 93 104 IPR000217 GO:0005874|GO:0007017
Pste4g02964 571 PRINTS Tubulin signature 176 189 IPR000217 GO:0005874|GO:0007017
Pste4g02964 571 PRINTS Tubulin signature 51 70 IPR000217 GO:0005874|GO:0007017
Pste4g02964 571 PRINTS Tubulin signature 190 210 IPR000217 GO:0005874|GO:0007017
Pste4g02964 571 PRINTS Tubulin signature 10 30 IPR000217 GO:0005874|GO:0007017
Pste4g02964 571 PRINTS Tubulin signature 106 130 IPR000217 GO:0005874|GO:0007017
Pste4g02964 571 PRINTS Tubulin signature 132 150 IPR000217 GO:0005874|GO:0007017
Pste4g02964 571 PRINTS Tubulin signature 151 172 IPR000217 GO:0005874|GO:0007017
Pste4g02964 571 ProSitePatterns Tubulin-beta mRNA autoregulation signal. 1 4 IPR013838 -
Pste4g02964 571 Gene3D Tubulin/FtsZ, GTPase domain 363 521 IPR036525 -
Pste4g02964 571 SUPERFAMILY Tubulin nucleotide-binding domain-like 1 243 IPR036525 -
Pste4g02964 571 SUPERFAMILY Tubulin nucleotide-binding domain-like 359 485 IPR036525 -
Pste4g02964 571 Coils Coil 530 550 - -
Pste4g02964 571 MobiDBLite consensus disorder prediction 547 571 - -
Pste4g02964 571 FunFam Tubulin beta chain 264 370 - -
Pste4g02964 571 SUPERFAMILY Tubulin C-terminal domain-like 480 551 IPR008280 -
Pste4g02964 571 Gene3D - 267 362 IPR037103 -
Pste4g02964 571 PRINTS Beta-tubulin signature 88 99 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Pste4g02964 571 PRINTS Beta-tubulin signature 230 239 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Pste4g02964 571 PRINTS Beta-tubulin signature 311 329 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Pste4g02964 571 PRINTS Beta-tubulin signature 41 58 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Pste4g02964 571 PRINTS Beta-tubulin signature 265 281 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Pste4g02964 571 PRINTS Beta-tubulin signature 245 258 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Pste4g02964 571 PRINTS Beta-tubulin signature 347 370 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Pste4g02964 571 PRINTS Beta-tubulin signature 152 164 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Pste4g02964 571 PRINTS Beta-tubulin signature 212 224 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Pste4g02964 571 PRINTS Beta-tubulin signature 329 343 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Pste4g02964 571 PRINTS Beta-tubulin signature 108 126 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Pste4g02964 571 PANTHER TUBULIN 486 549 IPR000217 GO:0005874|GO:0007017
Pste4g02964 571 FunFam Tubulin beta chain 1 262 - -
Pste4g02964 571 FunFam Tubulin beta chain 496 556 - -
Pste4g02964 571 Pfam Tubulin C-terminal domain 261 364 IPR018316 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02964 Pste-Chr4 21095332 21111879 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g02964 4 21095332 21111879 Pste4g02964 4 21095332 21111879 ECH