Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02859 GAGGAGCCAAACACTCCTTAGGATCATTTTTCTTTTGGTGTTTCTTGGGTGGCTCATGGTTTGGATCTTGCTACCCACAAAGGTTTACAAGGACACATGGACTCCAAAACTGACAACCAAATTAAACTCTAAGTACTTTAGAGAGCAAGGCACAAATCTCTTGCTTTTCACATTTCCCGTCATGTTCGTTGGGGCCCTGGGATGTATCTATCTCCATCTTCTCCAAAAAAGAACAGAAAAACTACCTTACAAAAGCGGAGGAGTAATTAACAGATGGTTATGTTTCTTGAGACGCCCATTTGTTGTGATGTCTCCAATAGGAATTGTCACAACTATGGAGCTTATATTTGCACTCATGTTTGCTGCACTCTTGATTTGGTCCCTTTCAAATTACTTACATACCAGCTTTGGCCATCTCCATATGCACAAGGAGGGCGAGAAAGTGTGGCAAGCAAGGTTCAGGAGTGTAGCTCTGAGAGTTGGGTACATAGGAAACATATGTTGGGCATTTCTATTCTTTCCAGTCACTAGAGGATCTTCTATTCTTCCCCTTTTTGGCCTCACATCTGAGTCAAGCATCAAGTACCACATCTGGCTTGGACATCTATCCAACGCTCTTTTTGCTTGGCATACCATAGGTTTCTTTATTTACTGGGCCATCACAAACCAAATGAACCAGGCGATAGAGTGGAGAAAGACATATGTATCAAATTTAGCTGGCGTGTTTGCAAGTTTAATTGCTTTAGTGATGTGGGTGACCAGTGCTCCTCGGTTCAGGCGTAAAATGTTTGAGGTTTTCTTCTACACTCACCATCTCTACACACTCTACATCTTATTTTATGCCATCCACGTCGGAGTTGCATACATGTGCATGATTGCTCCTGGGATTTTCCTCTTCCTCATTGATAGACACCTCAGATTCTTACAATCTCGCCAACATGCTCCGTTGCTATCAGCTCGCCTTTTACCCTGTGGTGCAGTTGAGCTCAACTTCTCCAAGAGTCCAAGTTTAAACTATAACCCCACGAGCATGATGTTTATAAATGTGCCCAAAATTTCCAAGCTGCAGTGGCACCCTTTTACCGTGATTTCTAGTTCTAATATGGAGACTGATATTTTAAGCGTTGCCATTAAAAGTGGGGGTAGTTGGTCAAATAAACTTTACCAGGAACTTTCTTCATCTGCTTTGGATCATCTCGATGTTTCTGTTGAAGGACCCTATGGACCAAATACTTCACAATTTTTAAGGTACGATCAGCTTGTATTGGTGAGCGGCGGAAGTGGCATCACTCCCTTCATATCCATAATCCGAGATATCATATTTCACAACCAACAACAAGAATCGCATGTTTCAAGAGTACTACTTGTTTGTACTTTCAAGAACTCTGCTGAACTAACCATGTTAGATCTTATGCTTCCTGTTTCTGCCTCTGCAACACAAATCTCAAACCTTTCAGTCCAAATCGAGGCTTATGTTACCAGAGAAAATGAAGAACCCCCGAGAGATTCTCAAGAAAAGATCCAAACCAAATGGTTTAAGCCTACCCTATCAGACACTCCCATCTCGGTAGTATTAGGCCCAAACAACTGGCTATGGCTTGGTGCTATAATCTCATCATCTTTTCTCATGTTCCTCCTCCTTTTGGGGATTATCACTCGTTACTATATCTATCCTATTGAAAAAAACTCAGATGAAGTTTATAATTGGACCTTTAAGGTTCTTTGGTTCTTGTTTATACTCTGTGCAGGCATATGCATATGTTCTAGTGCAGTTTTTATTTGGTGGAAGGGACAAAACAGCCTGGAATGTAAGCAAATCATGAATGTAGAAGTTCCAATACCAACAAGGTCACCAGGGTCATGGATTTATGGCTCAGAAAGAGAGCTCGAAAGTCTTCCCCATCAGTCTCTAGTGCAAGCAACCAATGTGCACTTTGGTGCAAGGCCTGATCTAAAGAAAATTCTGTTTGAGTGCAAAGACAAAGATGTTGGAGTCTTGGTTTGTGGGCCAAGGGGCATGAGACATGAAGTTGCCAGAATCTGTGCTTCTGGTTTAGGTGATAATCTTCACTTTGAAGCCATCAGCTTTACATGGTGATGTGTATATTATGGCGTCAATATGGCTGTGTAATATATTGAGTGGTTTAAATAGTATAGTCAGTACCGCCAATTAGTGTAATATTTTTTCATAACTATCGTGTGC 2203 0.414 MVWILLPTKVYKDTWTPKLTTKLNSKYFREQGTNLLLFTFPVMFVGALGCIYLHLLQKRTEKLPYKSGGVINRWLCFLRRPFVVMSPIGIVTTMELIFALMFAALLIWSLSNYLHTSFGHLHMHKEGEKVWQARFRSVALRVGYIGNICWAFLFFPVTRGSSILPLFGLTSESSIKYHIWLGHLSNALFAWHTIGFFIYWAITNQMNQAIEWRKTYVSNLAGVFASLIALVMWVTSAPRFRRKMFEVFFYTHHLYTLYILFYAIHVGVAYMCMIAPGIFLFLIDRHLRFLQSRQHAPLLSARLLPCGAVELNFSKSPSLNYNPTSMMFINVPKISKLQWHPFTVISSSNMETDILSVAIKSGGSWSNKLYQELSSSALDHLDVSVEGPYGPNTSQFLRYDQLVLVSGGSGITPFISIIRDIIFHNQQQESHVSRVLLVCTFKNSAELTMLDLMLPVSASATQISNLSVQIEAYVTRENEEPPRDSQEKIQTKWFKPTLSDTPISVVLGPNNWLWLGAIISSSFLMFLLLLGIITRYYIYPIEKNSDEVYNWTFKVLWFLFILCAGICICSSAVFIWWKGQNSLECKQIMNVEVPIPTRSPGSWIYGSERELESLPHQSLVQATNVHFGARPDLKKILFECKDKDVGVLVCGPRGMRHEVARICASGLGDNLHFEAISFTW 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02859 680 SFLD Ferric reductase subgroup (FRE) 33 680 - -
Pste4g02859 680 Pfam Ferric reductase NAD binding domain 399 664 IPR013121 GO:0016491
Pste4g02859 680 SFLD Ferric Reductase Domain 7 680 - -
Pste4g02859 680 Gene3D - 600 679 IPR039261 -
Pste4g02859 680 Pfam Ferric reductase like transmembrane component 143 261 IPR013130 -
Pste4g02859 680 PRINTS Cytochrome B-245 heavy chain signature 220 243 IPR000778 GO:0016020|GO:0016491
Pste4g02859 680 PRINTS Cytochrome B-245 heavy chain signature 596 614 IPR000778 GO:0016020|GO:0016491
Pste4g02859 680 PRINTS Cytochrome B-245 heavy chain signature 245 265 IPR000778 GO:0016020|GO:0016491
Pste4g02859 680 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 291 395 IPR017927 GO:0016491
Pste4g02859 680 PANTHER NADPH OXIDASE 12 678 - -
Pste4g02859 680 FunFam Ferric reduction oxidase 3 388 506 - -
Pste4g02859 680 CDD NOX_Duox_like_FAD_NADP 298 476 - -
Pste4g02859 680 Pfam FAD-binding domain 297 392 IPR013112 GO:0016491
Pste4g02859 680 Gene3D - 383 512 IPR039261 -
Pste4g02859 680 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 399 675 IPR039261 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02859 Pste-Chr4 20100620 20108697 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02859 1 680 Miscellaneous Gene Families AT5G23980 57.787 0.0 820
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g02859 4 20100620 20108697 Pste4g02859 4 20100620 20108697 ECH