Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02753 ATGCATTGCAATGAGAAAGACATGAACATACTTCTAAGCTTCAAAACAGGGGTGACAGATCCTTCGGGCATGCTCACCTCATGGTTTCCAAAATTAGATTGTTGCCAATGGAAAGGAGTCAAGTGTGATAATACCACTGGGAGAGTTACACAACTTAATCTCCCTTGCCACACAAATCGCCATAAACTTGTTGCTTTTGGAGAGAAGGAGAACAAATCACACTGCCTAACAGGTGAACTCAATCTTCCTCTGTTGGAACTTGAATTTTTGAGCTACTTGAATTTGAGCAACAATGACTTCAAGTCTATCCAATATAATTCAACAAGTAACCAAAAATGTGATGACTTGTCAAGAGGTAACCCACCCCATCCTTGTGAAAACTCGACCAACCTACTTTATCTTGATTTATCATATAATTATGATCTTCTTGTCGATAATATCCATTGGATTTCCCTTTTTTCCTCATTGCAATATCTTAACCTTGGTGGTGTTCATCTTCGTAAGGAAATTGATTGGCTTCAATCAATGACCATGCTCCCTTCACTTTTAGAGTTACACTTGGCAAGTTGTCACCTTGAAAACATCTATCCATTACGTGAGTTTGCTAATTTTACTTCACTTCAAGTTTTAAATCTTGCTGATAATCGGTTTCTAGATGAGTTGCCTAGTTGGTTATTCAATCTTAGTTGTAACATCTTTCATATTGACCTCAGTCGAAATAAGATACATAGCCAGCTACCCAAAACATTGCCAAATCTTAGAAGTATTAAATCCTTTGTTTTATCTCATAATTGTCTCAAAGGACCAATTCCAAGTTGGTTAGGGCAACTTGGGCAACTGCAAGAACTTGATCTTTCTCATAATTCTTTTTCTGGTCCAATCCCCGAAAGTTTAGGAAAGCTATCATCCCTTATTAAATTGAAACTCGAGTCAAATGACTTGAATGGAACTCTTCCAGAGGATCTCGGACAACTCTTCAACTTGGAGACCCTTCGAGTTTCAGAAAATCCCTTGACTGGAATTATGTCTGAAAGAAATTTAAGTTCTTTAAAAAATTTGAAGAACTTTTCCATGAGTTCGCCTGGCCTGATATTTCATTTTGATCCAGAATGGCTCCCTCCCTTTCAACTTCTAAATATTGAATTGGGCCATTTGAGTGACAAACTTCCTGCATGGATATTCACACAGAGTTCTCTAAAGTATCTAACAATTGCAGACTCAACTACTTCATTTGAACCTCTTGACAAGTTTTGGAGCTTTGCTACTCAACTTGAATATATTTCTTTGCGAAATAACACAATCAATGGGGACATGTCGAATGTGTCGCTAAGCTCAAAAGTTGTTTGGTTTGTGGAGAATAATTTAAGAGGTGGCATTCCTCATATATCTCCACAAGTGGTTGTCTTGATATTACGTAATAACTCATTGTCAGGATCCATTTCCATCTCTTGTGTCACAATTCAAGAGATAAAAGAAATTTACAATACTTAG 1491 0.3709 MHCNEKDMNILLSFKTGVTDPSGMLTSWFPKLDCCQWKGVKCDNTTGRVTQLNLPCHTNRHKLVAFGEKENKSHCLTGELNLPLLELEFLSYLNLSNNDFKSIQYNSTSNQKCDDLSRGNPPHPCENSTNLLYLDLSYNYDLLVDNIHWISLFSSLQYLNLGGVHLRKEIDWLQSMTMLPSLLELHLASCHLENIYPLREFANFTSLQVLNLADNRFLDELPSWLFNLSCNIFHIDLSRNKIHSQLPKTLPNLRSIKSFVLSHNCLKGPIPSWLGQLGQLQELDLSHNSFSGPIPESLGKLSSLIKLKLESNDLNGTLPEDLGQLFNLETLRVSENPLTGIMSERNLSSLKNLKNFSMSSPGLIFHFDPEWLPPFQLLNIELGHLSDKLPAWIFTQSSLKYLTIADSTTSFEPLDKFWSFATQLEYISLRNNTINGDMSNVSLSSKVVWFVENNLRGGIPHISPQVVVLILRNNSLSGSISISCVTIQEIKEIYNT 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02753 496 Pfam Leucine rich repeat N-terminal domain 5 43 IPR013210 -
Pste4g02753 496 Gene3D Ribonuclease Inhibitor 117 491 IPR032675 -
Pste4g02753 496 Gene3D Ribonuclease Inhibitor 1 116 IPR032675 -
Pste4g02753 496 SMART LRR_typ_2 179 203 IPR003591 -
Pste4g02753 496 SMART LRR_typ_2 325 350 IPR003591 -
Pste4g02753 496 SMART LRR_typ_2 87 110 IPR003591 -
Pste4g02753 496 SMART LRR_typ_2 277 301 IPR003591 -
Pste4g02753 496 SMART LRR_typ_2 204 228 IPR003591 -
Pste4g02753 496 Pfam Leucine rich repeat 235 289 IPR001611 GO:0005515
Pste4g02753 496 SUPERFAMILY RNI-like 127 437 - -
Pste4g02753 496 PANTHER OS01G0149700 PROTEIN 245 441 - -
Pste4g02753 496 FunFam Leucine-rich repeat receptor protein kinase EMS1 270 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02753 Pste-Chr4 19453680 19455170 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02753 3 480 Receptor kinase-like Gene Family AT4G13920 27.644 4.39e-33 132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g02753 4 19453680 19455170 Pste4g02753 4 19453680 19455170 ECH