Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02235 AGAGGATCCAGATGTGTAAGAGGTTGACAGAGGAGTGAATAGACTTACTTACATTGAGCGGTATGGTGGTTGGAGTTGGAAGCTCCGTCTTGTTTCGATGAATTCGAGGAAATCCCTTTGTACTTAACACTGAACATTTATCATTGTGTTTCTCATTTGAACTCAATCGAACCCGGCATTCTCATTGTATCAAGCATGGCTCAATTTCTCAACACTTCCTTCATCCCTTCCTCCTCTTCGCTCCGCCGCACTCCCATTCCCCACCGCAAAACGACACCTCCCCTTGTCGTTCGGGCCAAGATCCGGGAGATTTTCATGCCCGCACTCAGCTCCACCATGACCGAGGGCAAAATCGTCTCCTGGACCAAATCCGAAGGCGACAAGCTCTCCAAGGGCGACAGCGTTGTCGTCGTTGAGTCCGACAAGGCCGACATGGACGTCGAGACCTTCTACGACGGCTTCCTTGCTGCCATCGTCGTCCAGGAAGGCGACGTCGCCGCCGTCGGATCCCCCATCGCATTCCTCGCCGAGACCGAGGATGAGATTCCTCAAGCCAAATCCAAAGCCTCCTCCTCTTCCTCTTCTGCCTCCGCCGCACCTGCACCTGCACCTGCACCTGCATCCACACCCGCGCTCCCATCCCAACCGGAAAAGGTTGCAGCTCCGGCTCCGTCTCCGGCTCCGGTCGTTGCGTCCAGTCACCCTGCTTCGGAGGGAGGGAAGAGGATTGTTGCGTCGCCTTATGCCAAGAAGCTCGCCAAGGAGTTTAAGGTGGAGTTGGGGAGGATTGTGGGGACTGGACCTATGGGGAGGATTGTGGCTAAAGATGTTGAGGCATTTGCAGCTACAGGGAATGCGGCACCGGCACTAGGGAAGAGTGCAGCGCCTGCCGGGGTGGAGTTGGGATCCGTGGTGCCTTTCACCACAATGCAGACTGCTGTGAGTAGGAACATGGTGGACAGTTTGGCAGTTCCCACTTTCAGAGTTGGTTACACCATCACCACAGATGCACTTGATGCCTTGTACAAGAAGATCAAGTCAAAGGGAGTTACAATGACAGCATTGCTTGCCAAGGCTACTGCACTTGCGCTGGTTAAACACCCTGTTATGAACTCTAGTTGTAGAGATGGTAATAGCTTTACATATAATAGCAGCATCAATGTTGCAGTTGCTGTTGCTACAGATGGCGGACTCATTACACCAGTGCTTCAGGATGCTGATAAGGTTGATGTATATTCATTGTCAAGAAAGTGGAAGGAGTTGGTTGACAAGGCCCGAGCCAAGCAGCTGCAACCTCATGAATATAACAGTGGTACCAGTACTTTCACTCTTTCTAATCTGGGAATGTTTGGTGTTGATCGCTTCGATGCTATTCTGCCACCTGGAACTGGAGCAATAATGGCTGTTGGAGCATCACAGCCAACTCTTGTGGCCACCAAGGATGGTCGCATGGGCATGAAGAACCAAATGCAGGTCAATGTTACAGCTGATCATAGAGTAATCTATGGAGCTGATGTGGCTTCATTCTTGCAAACCCTGTCAGTGATTATTGAGGACCCCAAAGATCTTACTTTCTAGTTTCATTTTCCTAACAAGTGAAAAGGCGTGTTCCATCTCTGGGTATGATTCCTAACATCGTGGCTGTGGGATTTTCAATTGTTGACAGGCAGAAATTGAGTCAATTACTATTCACTTGGAAATTTCCAAAGAACGGAACAGTTTTGAATAGGAAAGCTGAGCTGTAGTTTCTTAAAATGGATATATTCAGTCGAATATGACGTGTACCTTTTTCTTAATACTGTCTATTTTTTTTCCAAGGCTGTTCATTATTGTCTAATAATGTCCATTATTTGTGTAAGCTTAAAGCTTATTTTTGGATTATAGATCTTGAAAAGTAAAACTCAAAGGATTGAATGTTGGCTATAGATTATGTTATGAAACCAGG 1945 0.4802 MAQFLNTSFIPSSSSLRRTPIPHRKTTPPLVVRAKIREIFMPALSSTMTEGKIVSWTKSEGDKLSKGDSVVVVESDKADMDVETFYDGFLAAIVVQEGDVAAVGSPIAFLAETEDEIPQAKSKASSSSSSASAAPAPAPAPASTPALPSQPEKVAAPAPSPAPVVASSHPASEGGKRIVASPYAKKLAKEFKVELGRIVGTGPMGRIVAKDVEAFAATGNAAPALGKSAAPAGVELGSVVPFTTMQTAVSRNMVDSLAVPTFRVGYTITTDALDALYKKIKSKGVTMTALLAKATALALVKHPVMNSSCRDGNSFTYNSSINVAVAVATDGGLITPVLQDADKVDVYSLSRKWKELVDKARAKQLQPHEYNSGTSTFTLSNLGMFGVDRFDAILPPGTGAIMAVGASQPTLVATKDGRMGMKNQMQVNVTADHRVIYGADVASFLQTLSVIIEDPKDLTF 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02235 460 SUPERFAMILY Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 171 217 IPR036625 GO:0016746
Pste4g02235 460 FunFam Acetyltransferase component of pyruvate dehydrogenase complex 32 135 - -
Pste4g02235 460 FunFam Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex 234 459 - -
Pste4g02235 460 MobiDBLite consensus disorder prediction 119 175 - -
Pste4g02235 460 Pfam Biotin-requiring enzyme 38 108 IPR000089 -
Pste4g02235 460 SUPERFAMILY CoA-dependent acyltransferases 231 455 - -
Pste4g02235 460 Gene3D - 235 459 IPR023213 -
Pste4g02235 460 ProSiteProfiles Peripheral subunit-binding (PSBD) domain profile. 179 216 IPR004167 GO:0016746
Pste4g02235 460 PANTHER DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED 31 459 IPR045257 GO:0006086|GO:0045254
Pste4g02235 460 Pfam e3 binding domain 178 213 IPR004167 GO:0016746
Pste4g02235 460 MobiDBLite consensus disorder prediction 120 134 - -
Pste4g02235 460 MobiDBLite consensus disorder prediction 138 158 - -
Pste4g02235 460 SUPERFAMILY Single hybrid motif 35 128 IPR011053 -
Pste4g02235 460 Gene3D - 32 136 - -
Pste4g02235 460 FunFam Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex 173 220 - -
Pste4g02235 460 ProSiteProfiles Biotinyl/lipoyl domain profile. 36 111 IPR000089 -
Pste4g02235 460 ProSitePatterns 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 61 90 IPR003016 -
Pste4g02235 460 Pfam 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 239 458 IPR001078 GO:0016746
Pste4g02235 460 CDD lipoyl_domain 38 108 - -
Pste4g02235 460 Gene3D - 166 220 IPR036625 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02235 Pste-Chr4 16179098 16184015 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02235 1 460 Acyl Lipid Metabolism Gene Families AT1G34430 75.589 0.0 637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g02235 4 16179098 16184015 Pste4g02235 4 16179098 16184015 ECH