Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02232 CCGCCACTCCCTACACTCGCTTCCACTCTTCCATTTACTCACCCTTTACGGAGCTGTTCGCCAAGCGGCTTTCAACCTCAAGCGAAGCCTTTCACCCTCTGCTACTCTGCGGGGGACCTCACCGTATCCAATGTGGGGCCGTCGGTGCCCACAGTTGATCTTGTTCTGCATGATGACAGCCTGGTTTGGAAAATGGCGGGAGGCAACTCCATGATAGAGATAGAGATAGAGATAGAGATATGCCATGCCTCTCCACTAACACTACACATAATTACATATACACTCGCAACAATGGATCATTCCAACTTTGGACGTGTATTCACTATCTTCCTTTTTCTCTTTATTGCACCCTCTTTAGCTCAACAATCTTTCAGACCCAAAGCCCTAGTTGTCCCAGTTAAAAAAGACCCTTCCACGCTCCAATACGTGACTCAACTCAACCAAAGAACCCCGCTTGTTCCACTGAATCTCGTGCTTGATATCGGTGGCCAATTCCTCTGGGTCGATTGTGACGGCAGCTATATCTCCTCCACATACCGCCCTGCACGGTGCCACTCCGCCCAGTGCTCCCTTGTCGGAGACAACGCCTGCGGCGACTGCTTCTCCGGGCCAAGACCAGGCTGCAACAACAACACCTGCGGAGTCACTCCCGACAACACCGTCACCCACACCGCCACCAGCGGCGAACTCGCCCAGGATGTGCTCTCTCTCCAGTCCACAAACGGCTTCAACCCAGGAAGAAACGTCACCGTTTCCCGCTTCTTATTCTCCTGCGCCCCAAGTTTCTTACTCCAAGGACTCGCCAATGGAGTCTCCGGCATGGCCGGTCTGGGTAGAACTAAAATCGCCCTCCCCTCGCAGCTCGCTTCCGCTTTCAGCTTTCACAGAAAATTCGCCGTTTGCCTCTCCCCTGGAAGCGGCGTTGCTTTCTTCGGCGACGGCCCTTACGTTTTTCTCCCCAACATTGAGGCTTCTCAACTACTCACCTTCACTCCGTTATTGCTGAACCCCGTGAGCACCGCTTCGGCTTTCTTCCAGGGAGAGCATTCAGCTGAGTATTTCATCGGCGTGAAATCCATCAGAATCGCTGAAAAGGCCGTGCCCGTCAACACCAGTTTGTTATCCATAAAGAGCAACGGCGTTGGTGGAACCAAGATTAGTTCCGTCAACCCTTACACCGTTTTGGAGGCTTCTATTTTCAAAGCAGTCACGGAGGCTTTTGTAAAAGCGGCCGAGGGGCCTGGTTGGAATTTAACGAGGGTGGGTGGTGTGACACCTTTTGAAGTGTGCTTCAGTACTGAGAACATCCTCAGCACTCGGCTAGGGGTGTCCGTGCCAACCATTGAGCTTGTGCTGCACAACCAGAACACGGTTTGGAGGATTTATGGAGCGAACTCAATGGTGAGTGTGAGTGATAAGGTGATGTGCCTTGGGTTTCTGAATGGTGGTCTCAACCCGACAACCTCAATTGTCATTGGAGGGTATCAGCTAGAGAATAATCTTTTACAGTTCGATTTGGCCACTTCAACATTAGGCTTCAGTTCTTTGCTTTATGGAATCCGAACCACTGTCTTCCTTTTTTTCTTCATTGCTCCTTCTTTGGCTCAAAAATCTTTCAGACCCAAAGCCTTGGTTGTCCCAATTAAAAAAGATCCTTCCACGCTACAATACGTGACTGAACTCAACCAAAGAACCTCACTTGTCCCAGTAAAGCTGGTGCTTGATATCGGTGGCCAATTCCTCTGGGTCGATTGTGAACGTAACTACGTCTCCTCCACATACCGCCACGCACGGTGCCACTCCGCCGAGTGCTCCCTCGTCGGAGACAAAGGCTGCAGTAGCTGCAACTCAGCGCCCAGACCGGACTGCAACAACAACACGTGCAGCGTCTTTCCCCACAACACTGTGGCCCACATCACCACCATCGGCGAACTCACCCAGGATGTGGTGTCTGTCCAATCCACCAACGGCTTCAACCCGGGACGAAACGTCACCGTTCCCCGCTTCTTATTCTCCTGTGCTCCCACCTTCTTACTCCAAGGACTTGCAAAAGGAGTCTCCGGCATGGCCGGTCTCGGTAGAACTAAAATCAGTCTTCCCTCCCAGTTCGCTTCCGCTTTCAGCTTCCACAGAAAATTCGCCGTTTGCCTTTCCTCTTCAACCGGCGTTGCTTTCTTCGGAGACGGCCCCTACGCTTTTCTCCTCAATGTCGATGCTTCTAAGTTTCTCTCCTACACACCGTTGTTGATGAATCCCGTTAGCACCGCTGGCACTTACTCCCAGGGAGAACGTTCTGTTGAATACTTCATCGGCGTGAAATCAATCAGAGTCGCTGAAAAGGTGGTGCCCGTGAACACCAGTTTGTTGCCCATAAAGACGAAGATTAGTTCCGTCAACCCTTACACCGTTTTGGAGGCTTCTATTTTCAAAGCAGTTACGGAGGCTTTCGTAAAAGCATCTGCTGGTTGGAATATAACGAGGGTGGGTTCTGTGGCGCCTTTTGAAGCGTGTTTCAGTAATGAGAACATGGGCAGCACCCGGTTAGGGGTGTCGGTGCCGGCCATCGAGCTTGTTCTGCAGAACAAGAACACCGTTTGGAGCATTTATGGAGGGAACTCAATGGTGAGTGTGAGTGATAAGGTGATGTGCCTTGGGTTTGTGAATGGTGGTCTCAACCCGACAACCTCAATTGTCATTGGAGGGTATCAGCTAGAGAATAATCTTTTACAGTTCGATTTGGCCACTTCAACATTGGGCTTCAGCTCTTTGCTCTTCGGAATGCAAACCTCCTGTGCAAACTTCAACTTTACTTCAGCCTTT 2820 0.5103 PPLPTLASTLPFTHPLRSCSPSGFQPQAKPFTLCYSAGDLTVSNVGPSVPTVDLVLHDDSLVWKMAGGNSMIEIEIEIEICHASPLTLHIITYTLATMDHSNFGRVFTIFLFLFIAPSLAQQSFRPKALVVPVKKDPSTLQYVTQLNQRTPLVPLNLVLDIGGQFLWVDCDGSYISSTYRPARCHSAQCSLVGDNACGDCFSGPRPGCNNNTCGVTPDNTVTHTATSGELAQDVLSLQSTNGFNPGRNVTVSRFLFSCAPSFLLQGLANGVSGMAGLGRTKIALPSQLASAFSFHRKFAVCLSPGSGVAFFGDGPYVFLPNIEASQLLTFTPLLLNPVSTASAFFQGEHSAEYFIGVKSIRIAEKAVPVNTSLLSIKSNGVGGTKISSVNPYTVLEASIFKAVTEAFVKAAEGPGWNLTRVGGVTPFEVCFSTENILSTRLGVSVPTIELVLHNQNTVWRIYGANSMVSVSDKVMCLGFLNGGLNPTTSIVIGGYQLENNLLQFDLATSTLGFSSLLYGIRTTVFLFFFIAPSLAQKSFRPKALVVPIKKDPSTLQYVTELNQRTSLVPVKLVLDIGGQFLWVDCERNYVSSTYRHARCHSAECSLVGDKGCSSCNSAPRPDCNNNTCSVFPHNTVAHITTIGELTQDVVSVQSTNGFNPGRNVTVPRFLFSCAPTFLLQGLAKGVSGMAGLGRTKISLPSQFASAFSFHRKFAVCLSSSTGVAFFGDGPYAFLLNVDASKFLSYTPLLMNPVSTAGTYSQGERSVEYFIGVKSIRVAEKVVPVNTSLLPIKTKISSVNPYTVLEASIFKAVTEAFVKASAGWNITRVGSVAPFEACFSNENMGSTRLGVSVPAIELVLQNKNTVWSIYGGNSMVSVSDKVMCLGFVNGGLNPTTSIVIGGYQLENNLLQFDLATSTLGFSSLLFGMQTSCANFNFTSAF 940
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02232 940 FunFam Basic 7S globulin 729 938 - -
Pste4g02232 940 Gene3D Acid Proteases 541 728 IPR021109 -
Pste4g02232 940 CDD xylanase_inhibitor_I_like 147 517 IPR033868 -
Pste4g02232 940 ProSiteProfiles Peptidase family A1 domain profile. 142 514 IPR033121 -
Pste4g02232 940 Pfam Xylanase inhibitor N-terminal 557 728 IPR032861 -
Pste4g02232 940 Pfam Xylanase inhibitor N-terminal 142 313 IPR032861 -
Pste4g02232 940 CDD xylanase_inhibitor_I_like 562 924 IPR033868 -
Pste4g02232 940 SUPERFAMILY Acid proteases 134 518 IPR021109 -
Pste4g02232 940 PANTHER ASPARTYL PROTEASE-RELATED 110 515 IPR001461 GO:0004190|GO:0006508
Pste4g02232 940 FunFam Basic 7S globulin 314 530 - -
Pste4g02232 940 SUPERFAMILY Acid proteases 549 930 IPR021109 -
Pste4g02232 940 ProSiteProfiles Peptidase family A1 domain profile. 557 921 IPR033121 -
Pste4g02232 940 Gene3D Acid Proteases 729 938 IPR021109 -
Pste4g02232 940 Gene3D Acid Proteases 314 529 IPR021109 -
Pste4g02232 940 FunFam Basic 7S globulin 537 728 - -
Pste4g02232 940 FunFam Basic 7S globulin 122 313 - -
Pste4g02232 940 Pfam Xylanase inhibitor C-terminal 352 514 IPR032799 -
Pste4g02232 940 Pfam Xylanase inhibitor C-terminal 767 921 IPR032799 -
Pste4g02232 940 Pfam Xylanase inhibitor C-terminal 25 81 IPR032799 -
Pste4g02232 940 Gene3D Acid Proteases 121 312 IPR021109 -
Pste4g02232 940 Gene3D Acid Proteases 17 84 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02232 Pste-Chr4 16162408 16177631 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02232 126 515 Miscellaneous Gene Families AT1G44130 23.558 2.14e-06 49.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g02232 4 16162408 16177631 Pste4g02232 4 16162408 16177631 ECH
Pste5g00809 5 5170938 5174419 Pste4g02232 4 16162408 16177631 PCT