Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02231 TAAACAATGATGTTCCTGTCCGAGGTGGCATAGTTGCTGGAGCAGGATAACCCAAACAGGAACAACCCAAGAAGAAGCGGAAGCAAAGATGGGTGGCTCCGTTTTCACTCACTTCCTCGTTCTCCCCTCATCTTCTACTCCCTCTCTTTCCACTCTCTTTCCCTCCAAATTTTCTACCAAACCCATAAACAAATCCGTTCCCTTCACCCTTCTTTACAACCAATTCCCTTCCACTTCGCCGCCTCGCCGATCCTCATTCTCTGTAAAAAAGATAAATGCCTCAGGAGTTCAGCAAACAGGATCCGTACCACATGGAGACAACATTGATGCAATGAAGTTCAGGGTTTTGTTGCAGAAGTTTCAGAGGAAAATGCCGACAAAATTCGTTAGTAACCTTTTCAGCAAGCAATCTATGACAAATGAATTTACAACCAAAGATCTTGAAGATGGGGAAAAATCATTAAAATGGGTTTCAGCGTTCTTGCTTGGACAAACTATATCAGTGATTTCTCCTGATGTTTCATATGCAACCAGCTCATCAAGGATTAATGAGATATATGAGGTTGGAGAGTTGTTTGATTTAAGCATCCAACTAATATACTTGGTATTGCTATTGAGTTTGCTAGGGACTGGGTCTTTCTTTGTGATTCGCCAAGTTCTTGTCCGCAGAGAACTCGACCTATCTGCCAAAGAGTTGCAGGAGCAAGTAAGAAGTGGTGATGCTGGTGCAACTGAGCTTTTTGAACTTGGTGCAGTGATGCTGCGTAGGAAATTTTACCCTGCCGCTACCAAGTTTTTGCTTCAAGCAATTCAGAAATGGGATGGGGATAATCCGGATCTTGCTCAGGTTTACAACGCTCTTGGTGTGAGCTATGTCCGCGATGGGAAAGTTGACAAAGGAATTGATCAGTTTGTAACAGCTGTCAAGCTTCAACCAGGATATGTCACAGCTTGGAACAATCTTGGTGATGCTTATGAGAGTAAAAAAGACTACAAGTCTGCTCTGAAGGCATTCGAAGAGGTCCTGCTATTTGATCCTAACAACAAGGTTGCCCGACCTAGGAGAGATTCTTTGAAGGAACTTGTTGAAGCAACCAAAGGAGTTCCTATTGTCAAATCAACAGAGAAGAAATGAGTGTCACTCACCCCATGGACATAGCATAGTTAATTGCATAGTTTTCAATAACTTGGTTGTGATGGAAGGATTTTTGGCTCTGTTGGTGTTAGTTACTACTTACTAGCTGAGGCACACTAGTAAATGAAGTTGAAAGTGCTCAATTCTCTAATTGGTTAGCAAAGCTTTGCTCTAGTCTGGTGGTGTATTCACATGTGAAAATTCCTCCTTTTTTTCTTTTGTTTCATAAATGGTCATTTTCGTGCCTTCTTAAAGTGATTCCTAATTTCCTATCATCATTTTGTCATTGC 1425 0.4168 MGGSVFTHFLVLPSSSTPSLSTLFPSKFSTKPINKSVPFTLLYNQFPSTSPPRRSSFSVKKINASGVQQTGSVPHGDNIDAMKFRVLLQKFQRKMPTKFVSNLFSKQSMTNEFTTKDLEDGEKSLKWVSAFLLGQTISVISPDVSYATSSSRINEIYEVGELFDLSIQLIYLVLLLSLLGTGSFFVIRQVLVRRELDLSAKELQEQVRSGDAGATELFELGAVMLRRKFYPAATKFLLQAIQKWDGDNPDLAQVYNALGVSYVRDGKVDKGIDQFVTAVKLQPGYVTAWNNLGDAYESKKDYKSALKAFEEVLLFDPNNKVARPRRDSLKELVEATKGVPIVKSTEKK 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02231 348 ProSiteProfiles TPR repeat profile. 252 285 IPR019734 GO:0005515
Pste4g02231 348 SUPERFAMILY TPR-like 214 323 IPR011990 GO:0005515
Pste4g02231 348 Pfam Tetratricopeptide repeat 238 284 - -
Pste4g02231 348 ProSiteProfiles TPR repeat profile. 286 319 IPR019734 GO:0005515
Pste4g02231 348 ProSiteProfiles TPR repeat region circular profile. 286 319 - -
Pste4g02231 348 Gene3D Tetratricopeptide repeat domain 207 345 IPR011990 GO:0005515
Pste4g02231 348 Pfam Tetratricopeptide repeat 288 319 IPR001440 GO:0005515
Pste4g02231 348 PANTHER LD24721P 210 330 IPR047150 -
Pste4g02231 348 SMART tpr_5 286 319 IPR019734 GO:0005515
Pste4g02231 348 SMART tpr_5 252 285 IPR019734 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02231 220 319 EF-hand Containing Proteins AT1G05150 32.000 9.60e-06 45.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g02231 4 16149376 16153859 Pste4g02231 4 16149376 16153859 ECH