Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01898 TTCATATATTTTCAGGTTTTAAAAAATAACAGTGATGGATCTGAGATTGGTTCCTTACTGCAAATTATGAATCATACTCTTACTATATATGGTTCCAGGCTTCTCAGGCATTGGGTATCTCACCCATTGTGTGATCAAACCTTAATTTCTGCTCGTCTTCATGCTGTATCTGAAATTGCTGAGTCCATGGGATCTTCATCTTGTAATAGTATGAAGAATCTTGGACACATTGAAGAAGATCCTGATGTAGCAATCGTGCAACCTAAATTAGCACACATACTTTCACTGGTTTTGACAACTCTTGGCCATGCACCTGATGCACAACGTGGAATTACAAGAATTTTCCATTGCACTGCTACACCATCTGAGTTCATTACAGTAGTTCAAGCTATTTTATCTGCCGGAAAACAGCTTCGACAACTTAACATAGGAGAGGAGAATAATAACACATTGCGCTCTAGTTTGTTAAAAAAGTTAATTTTGACTGCTTCATCTGACAGTGTTATTGGCAATGCTGTAAAAATGTTGTCATCTTTAAACTTAGACTCTGCTGATCAAGGAGATCTATCAAAATTGATCATTGCATCAGAGGGACAATTTCAGAGGGCTCAGAAGGCTTTCAAGCTGGCAATGGAGCAATTAGATTCGCTGATTTACTTATATCGTAAACAGCTTGGAATGCAAAATTTGGAATTCATTAGCATTTCTGGAACAACTCATTTGATTGAGTTATCAACTGATGTAAAGATTCCTTCAAACTGGATCAAGGTAAACAGCACAAAGAAAACAATTCGGTATCACCCTCCTGAAGTAGTAACCGCATTGGACAAGTTATCATTAGCAAAGGAAGAGCTCACTATTGCCTGCCGATCTGCTTGGAATAGCTTTCTTAGGGACTTCAGTAAACACTATGCCGATTTCCTAGCTGCTGTTCAAGCACTAGCTGCTTTAGATTGTCTGCATTCACTTGCTATTCTTTCAAGAAATAAGGGTTATGTTTGCCCAGTGTTTGTAGATGCTCATGAGCCTGTTCAGATACAAATTTGTTCTGGTAGACATCCGGTTTTGGAGACTAACTTACAAGACAATTTTGTCCCAAATGATACAAACATGCATGCAGATGGAGAATACTGTCAAATTGTTACTGGACCCAATATGGGGGGGAAAAGTTGCTATGTTCGCCAGGTGGCTCTGATTGCTATTATGGCTCAGGTTGGTTCCTTTGTACCAGCATCATCAGCAAAACTACACGTCCTTGATAGGATCTACACCCGGATGGGTGCTTCGGATAGTATTCAGCAAGGAAGAAGCACTTTCCTTGAAGAATTAAGTGAGACGTCACATATACTCCACAGCTGCACAGAACATTCACTGGTTATCCTAGATGAGCTTGGGAGAGGTACAAGTACCCATGATGGTATGGCCATTGCTCATGCTACGTTGTATTATCTTCTGAAGCAAAAAAGATGCATGGTCCTCTTTGTCACTCACTATCCAAAGATTGCCAACCTGACAACTGAATTTCCTGGCTCTGTGGCTGCATATCATGTGTCACATCTGACCTCACATGATGCAAGTAAAAATTCTAACTCAGATCATGATGTAACTTATCTATACAAGCTCGTACCAGGTGTTTCAGAGAGGAGTTTTGGATTTAAGGTTGCCCAGCTTGCACAGCTACCATCACATTGCATCAATCGAGCCATTGTCATGGCTTCTAAATTAGAAGCACTCGTAAACAGTAGAATGCATAGATTGAGAAAGGAGCTATTATTGGATACCCCGGTGATTGGTCAAGAGCAAGAACAGCATGTGGATCAACCACACGATTATTCACATCAAGAGTTTGGTATAGCTTACAAAGATTTCTATTTAAACTTAAAAGCTGCAATACAGGATGATGACTGTGCAAAAAACTTTCACCTATTGGAACATGCTAGAAGCATTGCAAAGAAATTAATTCGCAGATCAATGCAGTACTGTAAGTGAGGATTACATGCAGAAGCAGGGTTCAGATCTCCTCCCTCCAGCGATGTAGAATGTAGATAATATTTTGCATAGAAGTTGTTTATTGGTAACCTTCCGG 2086 0.3988 FIYFQVLKNNSDGSEIGSLLQIMNHTLTIYGSRLLRHWVSHPLCDQTLISARLHAVSEIAESMGSSSCNSMKNLGHIEEDPDVAIVQPKLAHILSLVLTTLGHAPDAQRGITRIFHCTATPSEFITVVQAILSAGKQLRQLNIGEENNNTLRSSLLKKLILTASSDSVIGNAVKMLSSLNLDSADQGDLSKLIIASEGQFQRAQKAFKLAMEQLDSLIYLYRKQLGMQNLEFISISGTTHLIELSTDVKIPSNWIKVNSTKKTIRYHPPEVVTALDKLSLAKEELTIACRSAWNSFLRDFSKHYADFLAAVQALAALDCLHSLAILSRNKGYVCPVFVDAHEPVQIQICSGRHPVLETNLQDNFVPNDTNMHADGEYCQIVTGPNMGGKSCYVRQVALIAIMAQVGSFVPASSAKLHVLDRIYTRMGASDSIQQGRSTFLEELSETSHILHSCTEHSLVILDELGRGTSTHDGMAIAHATLYYLLKQKRCMVLFVTHYPKIANLTTEFPGSVAAYHVSHLTSHDASKNSNSDHDVTYLYKLVPGVSERSFGFKVAQLAQLPSHCINRAIVMASKLEALVNSRMHRLRKELLLDTPVIGQEQEQHVDQPHDYSHQEFGIAYKDFYLNLKAAIQDDDCAKNFHLLEHARSIAKKLIRRSMQYCK 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01898 662 FunFam DNA mismatch repair protein MSH3 332 603 - -
Pste4g01898 662 Gene3D - 177 300 - -
Pste4g01898 662 Gene3D - 332 610 IPR027417 -
Pste4g01898 662 PANTHER DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER 6 587 IPR045076 GO:0005524|GO:0006298|GO:0030983|GO:0140664
Pste4g01898 662 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 332 576 IPR027417 -
Pste4g01898 662 Gene3D - 6 324 - -
Pste4g01898 662 PIRSF Msh6 3 631 IPR017261 GO:0006298|GO:0030983
Pste4g01898 662 FunFam DNA mismatch repair protein Msh3 177 300 - -
Pste4g01898 662 SMART mutATP5 376 573 IPR000432 GO:0005524|GO:0006298|GO:0030983
Pste4g01898 662 Pfam MutS domain V 379 576 IPR000432 GO:0005524|GO:0006298|GO:0030983
Pste4g01898 662 SMART DNAend 14 359 IPR007696 GO:0005524|GO:0006298|GO:0030983
Pste4g01898 662 SUPERFAMILY DNA repair protein MutS, domain III 6 329 IPR036187 -
Pste4g01898 662 ProSitePatterns DNA mismatch repair proteins mutS family signature. 457 473 IPR000432 GO:0005524|GO:0006298|GO:0030983
Pste4g01898 662 Pfam MutS domain III 8 324 IPR007696 GO:0005524|GO:0006298|GO:0030983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01898 Pste-Chr4 14166529 14180536 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g01898 4 14166529 14180536 Pste4g01898 4 14166529 14180536 ECH