Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01862 GAAAACCCAACAACTCAAATTCCAACCCATATATCTGTATAACAACATATAATCGAAATTTCTGGCAAAGCCATTGTCTTTCCAAGAGGGGTTTAGGGCACAAAAGGCAGGTTTAAGCTCAGGCTCAGGGAAAGGGTGCGATTGGCGATGGCCGACGAGGACTATGATGACATGGACATGGGGTTCTCTCGCTCCCTCTCCCTCTCCCACTCCCACTCCCACTCCCACTCTCTTACACACAGGATTTAGGGTTTCTCCAAACTCAATTTGCCTAATGATAGCCCTTAATTCACGTAGCAGACGAGGGCAATGTTTTAATGAACTCTTTTCTTGACTAAGAGGAGCAATTCTTTAACTCACAGTGCACCAAAATCGATTCTTTTGTTTCGTGTCGTGTATTGAGTCCTTGTTCCTATTTTTTCTACCATTTTTATGATAACACTTTTGTATTTTTTTTTTTTTTTTGGTTTTCTGTATGAAAATATCAGAACAAAATAAAAACTTTTCAAATATTCTTCTACTGGGTTTGATAGCTTTACCTTTTCATTCAGAATTCTGTTTACAATTAATCTTCATGCTTCAATTGCTAGGGTTAGAGTCCTGTGTTTTTTAATCTTTATATTTCCACGGAATGATTTCTCATGCAATAAAGGGATTTCCACGGAATGATTTCTCATGCAATAAAGGGTGCTGTTGCAGGTACGAGGACGAACCCCCAGAGCCTGAAATTGAGGAAGGTGCAGAGGAGGATGTTGAAAACAACAAAAATGAAGAGATAACCGGAGATCCTCTTGAGACTGAGGATAAGGAAGACGAACAACCTGTGGAAAGGCCTCGAAAAACATCGAAATATATGACTAAGTATGAGCGTGCCAGGATTTTGGGTACACGTGCTCTTCAAATCAGTATGAATGCACCTGTCATGGTTGAGTTGGAGGGGGAAACTGACCCACTTGAGATTGCCATGAAGGAGCTTCGAGAGCGGAAAATACCATTTACAATCCGGCGCTACTTGCCTGATGGAAGCTACGAAGATTGGGGAGTTGATGAGCTGATTGTGGAAGACTCCTGGAAGAGGCAAGTTGGTGGTGATTGATGTTTGAATAGATAGAGGTGTTGGGAGGGAGTAACAGACGCCAAGATTTTTTGTCTCCTCATAACTTTTATCTTTGATTTGAGTTTGATACTGATCTATGATCTCACCCACCTTAAACATGGCTTACGACAATGTATTACTTTTTGGGTGCCTGTATCTCTGTTGCTCGTGCTTTCCAGCTTAGTATAATTTCTGTTTCAACTTGTTTATATATATATATCTAGGCTTTCAATAGTTTTTGTTGCATTTCTCAAATCTATCAGGAAACCTTGGTTAAACGAAGATAGAACA 1387 0.4023 MISHAIKGFPRNDFSCNKGCCCRYEDEPPEPEIEEGAEEDVENNKNEEITGDPLETEDKEDEQPVERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01862 154 ProSitePatterns RNA polymerases K / 14 to 18 Kd subunits signature. 76 90 IPR020708 GO:0003677|GO:0003899|GO:0006351
Pste4g01862 154 PANTHER DNA-DIRECTED RNA POLYMERASE SUBUNIT K 24 144 - -
Pste4g01862 154 MobiDBLite consensus disorder prediction 25 73 - -
Pste4g01862 154 FunFam DNA-directed RNA polymerases I, II, and III subunit RPABC2 17 145 - -
Pste4g01862 154 SUPERFAMILY RPB6/omega subunit-like 32 144 IPR036161 GO:0003677|GO:0003899|GO:0006351
Pste4g01862 154 PIRSF RpoK/RPB6 14 145 IPR006111 GO:0003677|GO:0003899|GO:0006351
Pste4g01862 154 Gene3D - 22 145 IPR036161 GO:0003677|GO:0003899|GO:0006351
Pste4g01862 154 Hamap DNA-directed RNA polymerase subunit Rpo6 [rpo6]. 73 128 IPR006111 GO:0003677|GO:0003899|GO:0006351
Pste4g01862 154 MobiDBLite consensus disorder prediction 28 42 - -
Pste4g01862 154 Pfam RNA polymerase Rpb6 71 122 IPR006110 GO:0003677|GO:0003899|GO:0006351
Pste4g01862 154 PIRSF RPB6 15 145 IPR028363 GO:0003899|GO:0005634|GO:0005665|GO:0006351
Pste4g01862 154 SMART RNA_pol_Rpb6_2 69 122 IPR006110 GO:0003677|GO:0003899|GO:0006351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g01862 4 13836712 13839482 Pste4g01862 4 13836712 13839482 ECH