Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01811 CTGGAAACCTTCACACTGTTGGTCCGCCGCTCCCCTCTGTTGGTCCGCGACTCCCTCCGCCGCACACCACCGCACACCACCAACTTAACTCAACGACTCACCACTGGAGTTCGCGAGCACTCCGCCGCTAACCATCGCGAGGCTGCGCCACACTCCGCCATTGGCCACCGCGAGGCTGCGACCCACTTACGGTTGCGCTGCCACACGCCATCGCATAGAGCTAGGGAGAAGCAATTGAAGAAAGAGAAATTTCTTCTTAAGCAAGCTCAGCAACAAGCTCAGCAATCATCCAATGCTTCTAAAAAGAGTGAAAAGAAAGTTGTGAAGCGTGGTGCGGAGGATGAGAATACTGAAGATTATGTTGATCCTGTGACTCCATTGGGTGAGAAGAAGTGTATGGCTCGACAGATGGCGAAGCAGTATAGTCCAAGTGCCGTGGAGAAATCGTGGTATGAATGGTGGGAGAAATCAAGTTATTTTGTGGCAGATGTTAACAGCTCCAAACCACCTTTTGTTATTGTTTTGCCCCCTCCAAATGTGACGGGTGCTCTCCATATAGGTCATGCTCTTACAGCCGCAATAGAGGACACAATGATTCGATGGCGCAGAATGTCTGGATACAATGCCTTGTGGGTGCCTGGAATGGATCATGCTGGAATTGCTACGCAGGTAGTTGTGGAGAAAAAGTTAATGCGTGAAAAAAAACTTACAAGGCATGATCTGGGCCGTGAGAAATTTGTTTCCGAGGTTTGGGAGTGGAAACACAAGTATGGGGGCACAATATTACAACAATTACGCCGATTAGGAGCCTCTTTGGATTGGTCTCGTGAGTGCTTCACAATGGATGACAGAAGATCTAGGGCCGTGACAGAGGCTTTTGTAAGGCTTTACAAGCAAGGCCTTATCTATAGGGACCTTCGTTTAGTGAATTGGGATTGTGTTTTGCGAACTGCAATATCTGATATTGAGGTGGATTATATTGATATAAAAGAAAGGAGTCTACTAAAGGTTCCAGGATATGACAAACCAGTGGAATTTGGAGTTTTAACAAAGTTTGCTTACCCTTTTGAAGGGAACCTAGGTGAAATTGTTGTTGCCACTACTAGAATTGAAACTATGCTTGGTGACACTGCTATTGCCGTACATCCTAATGATGACAGATATAGGAATTTTCAAGGAAAATATGCTATTCATCCATTTAATGGTAGAAAACTTCCTATAATTTGTGACGCTATTCTTGTTGATCCAAAGTTTGGGACAGGTGCTGTTAAGATTACGCCTGCCCATGATCCAAATGATTTTGAGGTGGGAAAACGTCACAACCTTGAATTCATTAATGTTTTCACGGATGATGGGAAAATAAATTCCAATGGTGGTTCTGACTTTTTGGGCATGCCACGGTTTAAAGCCCGAGAGGCGATAACAGAAGCATTACAGAAGAAGGGCCTTTATAGAGGATCTGAAAACAATGAGATGCGCCTTGGAGTTTGTTCAAGAAGTAATGATGTTGTGGAGCCCATGATAAAGCCCCAGTGGTATGTCAATTGCAATGATTTGGCAAAGCAAGCTCTTCTTTCTGCTGTGGATGAGGAAAACAAAAGGCTAGATATTATTCCAAAACAATATTTGGCTGACTGGAAGAGATGGCTAGAAAACATACGTGATTGGTGCATTTCGCGACAGCTATGGTGGGGCCACCAAATACCTGCTTGGTATGTCACTTTGGAGGATGATGTGCTGCAGGAATTTGGTGCTCATATCGATCATTGGGTAGTGGCAAGAAATGAAGAGGAAGCCCAAAAAGAGGCTAGCCAGAGGTACAATGGAAAGAAGTTTCATTTAGCCCAGGATCCTGACGTTTTGGATACATGGTTTTCTTCTGGTCTGTTCCCATTATCTGTGCTGGGATGGCCTGATGACACCGAGGACCTGAAGACATTCTATCCAACGTCTGTCCTGGAAACTGGCCACGATATCCTCTTTTTCTGGGTTGCTCGAATGGTGATGTTAGGATTGAAGTTGGGTGGTGATGTGCCTTTTACGAATATTTATTTGCATCCCATGATTCGTGATGCACATGGACGCAAGATGTCCAAATCCTTAGGTAATGTTATTGATCCCATTGAAGTGATAAATGGGATATCTTTGGAAGGTCTACACAGGAGGTTAGAGGCTGGTAACCTGGACCCCAAAGAACTGGCCACTGCTATAGAGGGTCAAAAGAAGGACTTTCCAAATGGTATTGATGAATGTGGTGCTGATGCCCTCCGTTTTGCACTGGTCTCATATACAGCTCAGTCTGACAAAATTAACCTGGATATTCAAAGGGTGGTTGGGTATCGCCAGTGGTGTAATAAATTATGGAATGCTGTGCGATTTGCTATGAGCAAGCTTGGGGATGATTATATTCCTCCTGCTGATTTGATTTCAGATGTTCTCCCTTTTAGCTGCCAATGGATCCTTTCAGTGTTAAATAAAACCATATCCAAAACAGTGAAATCGCTAGAATCATTTGAATTCTCACAAGCTACCACTGCTGTGTATTCTTGGTGGCAGTATCAATTGTGTGATGTATTTATTGAAGTGATTAAACCTTACTTTACTGGTAATGATCCCAAGTTTGCTTCGGAAAGACGCTTAGCACAAGATACTTTGTGGTTTTGTCTGGACAATGGCCTTCGATTGCTTCATCCCTTTATGCCTTTTGTCACGGAAGAATTATGGCAACGCCTTCCTTCACCCAGGGAATGCAAGAGACCAGAATCTATCATGATAAGTGCTTATCCATACACTGTAGAGGGCTGGAATAATGAAAGGGTGGAGAATGAGATGGACATTATTGAGTCTACTGTTAAGTCTCTCAGGTCACTGGCCAAAGAAAGACGTGACAGGCGACCGGCTTTTGTTCTATGCCGTACACTGGTGGTTACTGAGATCATTAACTCCCACCAACTGGAGATTGTAACATTAGCTAATCTATCGTCTTTGACAGTAATCACTGAAAAGGATGCTGTTCCATCTGGATATGCTGATACTGTTGTAAATGAAAGCCTTTCTGTTTATTTAGAGCTTCAAGGAACTAATTCTGCAGAAGCTGAGCTAGGGAAGATCAAGAAGATAGATGAGCTGACGAGACAAATTGAAAGACTAGAGAAGATTATGAATGCTCCAGGTTATGAAGAGAAGGTTTTGCCAAATATTCGAGCAAAGAACCAGGAGAAGCTAGATTCCCTAAAGAAGGAGCGTCTGTTGATTGAGGAAACAGCTGCTCTTAGTCTTCAGGAAAAAGTTTGATAATTTTTTTTTTCGGTTACATGCTTATATTATGGATTTTGAGTTAAAGTTCCAACTCGGTATTTTTATGGCCAAACCATTTTGGCTGTCTTATACTAAATATTAGTTTTGCTAAATTAATACAAGTTCTGGTTATCTTTTTGCCA 3440 0.4305 LETFTLLVRRSPLLVRDSLRRTPPHTTNLTQRLTTGVREHSAANHREAAPHSAIGHREAATHLRLRCHTPSHRAREKQLKKEKFLLKQAQQQAQQSSNASKKSEKKVVKRGAEDENTEDYVDPVTPLGEKKCMARQMAKQYSPSAVEKSWYEWWEKSSYFVADVNSSKPPFVIVLPPPNVTGALHIGHALTAAIEDTMIRWRRMSGYNALWVPGMDHAGIATQVVVEKKLMREKKLTRHDLGREKFVSEVWEWKHKYGGTILQQLRRLGASLDWSRECFTMDDRRSRAVTEAFVRLYKQGLIYRDLRLVNWDCVLRTAISDIEVDYIDIKERSLLKVPGYDKPVEFGVLTKFAYPFEGNLGEIVVATTRIETMLGDTAIAVHPNDDRYRNFQGKYAIHPFNGRKLPIICDAILVDPKFGTGAVKITPAHDPNDFEVGKRHNLEFINVFTDDGKINSNGGSDFLGMPRFKAREAITEALQKKGLYRGSENNEMRLGVCSRSNDVVEPMIKPQWYVNCNDLAKQALLSAVDEENKRLDIIPKQYLADWKRWLENIRDWCISRQLWWGHQIPAWYVTLEDDVLQEFGAHIDHWVVARNEEEAQKEASQRYNGKKFHLAQDPDVLDTWFSSGLFPLSVLGWPDDTEDLKTFYPTSVLETGHDILFFWVARMVMLGLKLGGDVPFTNIYLHPMIRDAHGRKMSKSLGNVIDPIEVINGISLEGLHRRLEAGNLDPKELATAIEGQKKDFPNGIDECGADALRFALVSYTAQSDKINLDIQRVVGYRQWCNKLWNAVRFAMSKLGDDYIPPADLISDVLPFSCQWILSVLNKTISKTVKSLESFEFSQATTAVYSWWQYQLCDVFIEVIKPYFTGNDPKFASERRLAQDTLWFCLDNGLRLLHPFMPFVTEELWQRLPSPRECKRPESIMISAYPYTVEGWNNERVENEMDIIESTVKSLRSLAKERRDRRPAFVLCRTLVVTEIINSHQLEIVTLANLSSLTVITEKDAVPSGYADTVVNESLSVYLELQGTNSAEAELGKIKKIDELTRQIERLEKIMNAPGYEEKVLPNIRAKNQEKLDSLKKERLLIEETAALSLQEKV 1097
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01811 1097 FunFam Valine--tRNA ligase, mitochondrial 345 486 - -
Pste4g01811 1097 CDD ValRS_core 169 772 - -
Pste4g01811 1097 Gene3D - 345 490 IPR009008 GO:0002161|GO:0006418
Pste4g01811 1097 SUPERFAMILY Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 784 1039 IPR009080 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Pste4g01811 1097 Pfam tRNA synthetases class I (I, L, M and V) 150 773 IPR002300 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Pste4g01811 1097 ProSitePatterns Aminoacyl-transfer RNA synthetases class-I signature. 178 189 IPR001412 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Pste4g01811 1097 MobiDBLite consensus disorder prediction 35 54 - -
Pste4g01811 1097 PANTHER VALYL-TRNA SYNTHETASES 114 1090 IPR002303 GO:0000166|GO:0004832|GO:0005524|GO:0006438
Pste4g01811 1097 MobiDBLite consensus disorder prediction 87 123 - -
Pste4g01811 1097 Pfam Anticodon-binding domain of tRNA ligase 818 960 IPR013155 GO:0004812|GO:0006418
Pste4g01811 1097 Coils Coil 937 957 - -
Pste4g01811 1097 MobiDBLite consensus disorder prediction 39 54 - -
Pste4g01811 1097 SUPERFAMILY Nucleotidylyl transferase 136 782 - -
Pste4g01811 1097 NCBIfam valine--tRNA ligase 137 1075 IPR002303 GO:0000166|GO:0004832|GO:0005524|GO:0006438
Pste4g01811 1097 PRINTS Valyl-tRNA synthetase signature 648 666 IPR002303 GO:0000166|GO:0004832|GO:0005524|GO:0006438
Pste4g01811 1097 PRINTS Valyl-tRNA synthetase signature 617 638 IPR002303 GO:0000166|GO:0004832|GO:0005524|GO:0006438
Pste4g01811 1097 PRINTS Valyl-tRNA synthetase signature 382 399 IPR002303 GO:0000166|GO:0004832|GO:0005524|GO:0006438
Pste4g01811 1097 PRINTS Valyl-tRNA synthetase signature 171 182 IPR002303 GO:0000166|GO:0004832|GO:0005524|GO:0006438
Pste4g01811 1097 PRINTS Valyl-tRNA synthetase signature 499 512 IPR002303 GO:0000166|GO:0004832|GO:0005524|GO:0006438
Pste4g01811 1097 CDD Anticodon_Ia_Val 772 911 IPR033705 -
Pste4g01811 1097 FunFam Valine--tRNA ligase, mitochondrial 139 337 - -
Pste4g01811 1097 FunFam Valine--tRNA ligase, mitochondrial 464 697 - -
Pste4g01811 1097 Gene3D HUPs 138 336 IPR014729 -
Pste4g01811 1097 Gene3D - 778 961 - -
Pste4g01811 1097 MobiDBLite consensus disorder prediction 87 101 - -
Pste4g01811 1097 FunFam Valine--tRNA ligase, mitochondrial 727 962 - -
Pste4g01811 1097 SUPERFAMILY ValRS/IleRS/LeuRS editing domain 344 494 IPR009008 GO:0002161|GO:0006418
Pste4g01811 1097 Coils Coil 86 106 - -
Pste4g01811 1097 Hamap Valine--tRNA ligase [valS]. 137 1094 IPR002303 GO:0000166|GO:0004832|GO:0005524|GO:0006438
Pste4g01811 1097 MobiDBLite consensus disorder prediction 102 117 - -
Pste4g01811 1097 Gene3D HUPs 526 771 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01811 Pste-Chr4 13503081 13516169 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g01811 4 13503081 13516169 Pste4g01811 4 13503081 13516169 ECH