Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01346 AAAAAATCCTCTATTAAACTGTACTTTGGAAAAAAAGATATATTGAAGAATCCACTCAGCTACTCTTAGACACCTTCCTATCTTTGTGGGTAACGTGTTCTTGCATCAAACTGTCGTCTCCACTCTGCTCTGGACCTTAGTACTACGCTAGTAGTTGCAGCAGCTTCTGCAGGAGCTAAAGGATTCTCCCTAACGATGGGGAACAAGTCTTTGTTGTTGGCCTTTTGTATGTGGGCTTTAACATGCTTGCTTCTTCCTTCTTTCTCCTGTGGACTTATGAGAATTGGTCTGAAGAAGAGAGATGTAGATCTTGATAGTATTAGAGCAGCTAGAATGGTAAGAGAGAATCTAAGATTAGGCAGACCTGTGTTGGGTGCATATGATCAGTACATTGGTAAACCAACCAATGAGGGCATACTACCTTTGAAGAATTACTTGGATGCACAATATTATGGAGAGATTGGAATTGGCACACCCCCACAGAAATTTAATGTCATATTTGATACTGGTAGTTCGAACCTTTGGGTTCCATCATCGAAGTGCTATTTTTCTCTTGCCTGCTATACTCATCGATGGTACAAGTCCAAGAAATCTAAAACTTTTACCAAAAATGGAACATCATGTAAAATAACATATGGATCTGGAGCAATATCTGGTTTTTTCAGCAATGATAATGTTAAAGATTTCATCGAGGCTACACGAGAAGGAAGTCTTTCCTTTGTGTTGGCAAAGTTTGATGGATTATTTGGGCTTGGGTTTCAGGAGATCTCAGTTGGAAGTGCTGTGCCTGTGTTCTCTTTTTGGCTCAACAGTGATCCAAAATCAAAAGATGGTGGTGAACTAGTTTTTGGAGGTGTTGATCCTAAACACTTCAAAGGAGATCATATCTATGTTCCAGTTACTAAAAAGGGTTACTGGCAGATTGAAATGGGAGATTTTCTCATTGGAGGTCTCTCAACAGGTGTTTGTGAGGGTGGCTGTGCTGCTATTGTGGATTCAGGAACATCTTTGCTTGCTGGTCCAACTACTGTTGTCACTGAAATCAATCATGCTATTGGAGCTGAAGGAGTTCTAAGTGTAGAATGTAAGGAAGTTGTTTCTGAATATGGAGAATTGTTATGGGATCTCTTGATATCTGGGGTACGACCTGGTGATGTCTGTTCACAGGTTGGTTTATGTTTTGCCAAAAGAACTCAATCAGAGAGTGCACTTCAATTGAGTGATGATTTGAAGATATTGGATGAATGCTTAATAATTCTGGAACCTCCACTACCAACCAACTTCTCTGGTGGGCTTGATACCCTTCATTGGTTACAATTACTGACTTTTAAATTTACTTTGCATCCTAATAATTGCAGCAGTGGAATTGAGATGGTGACTGAAAATGAACAGAGAGATTTGTCTGCTAAAGATACTGCTTTGTGCAATTCCTGTCAGATGCTTGTGGTTTGGATTCAGAATCAACTAAAACAAAAGAAGACCAAGGAGATAGTATTCAACTATGTAAATCAGCTATGCCAGAGCTTGCCAAGTCCTAATGGAGAGTCAGTAGTAGACTGTAAAAGCATTTCTGGATTGCCAAACATCACATTTACCGTTGGAGCCAAACCTTTCAACCTCACTCCTGAGCAGTATATTCTGAAAACTGGAGAAGGCATTGCAGAAGTTTGCCTGAGTGGGTTTATTGCTTTCGACGTTCCTCCTCCTCGGGGTCCACTCTGGATTCTTGGCGATGTTTTCATGAGGGTATATCACACCGTCTTTGACTATGGGAATCTCAGAGTTGGTTTCGCCAAAGCTGCCTAAACATCTAGGAGATTATGTAGGGCAACTTTTAATAAGCTTGTTAGTGTGTTGTAAATAGGCTTGTGTAACTATTATGGTGCTGGTTCACATTCATGAATGTACTTGTGAAACTATGCATGTTCAAGTATTGTATTTTTATTGCTTGTACTTAAGAGGACTATTTTCATTAAACACCATGTTGAACAGTAGATTATATATTGTACCCTTATGTTACGTGCCATGTGAATGAGGATGGCTATGGACGACTTAAAA 2058 0.397 MGNKSLLLAFCMWALTCLLLPSFSCGLMRIGLKKRDVDLDSIRAARMVRENLRLGRPVLGAYDQYIGKPTNEGILPLKNYLDAQYYGEIGIGTPPQKFNVIFDTGSSNLWVPSSKCYFSLACYTHRWYKSKKSKTFTKNGTSCKITYGSGAISGFFSNDNVKDFIEATREGSLSFVLAKFDGLFGLGFQEISVGSAVPVFSFWLNSDPKSKDGGELVFGGVDPKHFKGDHIYVPVTKKGYWQIEMGDFLIGGLSTGVCEGGCAAIVDSGTSLLAGPTTVVTEINHAIGAEGVLSVECKEVVSEYGELLWDLLISGVRPGDVCSQVGLCFAKRTQSESALQLSDDLKILDECLIILEPPLPTNFSGGLDTLHWLQLLTFKFTLHPNNCSSGIEMVTENEQRDLSAKDTALCNSCQMLVVWIQNQLKQKKTKEIVFNYVNQLCQSLPSPNGESVVDCKSISGLPNITFTVGAKPFNLTPEQYILKTGEGIAEVCLSGFIAFDVPPPRGPLWILGDVFMRVYHTVFDYGNLRVGFAKAA 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01346 536 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 264 275 IPR001969 GO:0004190|GO:0006508
Pste4g01346 536 FunFam Lysosomal aspartic protease 392 535 - -
Pste4g01346 536 PRINTS Pepsin (A1) aspartic protease family signature 264 275 IPR001461 GO:0004190|GO:0006508
Pste4g01346 536 PRINTS Pepsin (A1) aspartic protease family signature 91 111 IPR001461 GO:0004190|GO:0006508
Pste4g01346 536 PRINTS Pepsin (A1) aspartic protease family signature 214 227 IPR001461 GO:0004190|GO:0006508
Pste4g01346 536 Pfam Eukaryotic aspartyl protease 84 535 IPR033121 -
Pste4g01346 536 Pfam Saposin-like type B, region 2 296 328 IPR008138 -
Pste4g01346 536 Gene3D Acid Proteases 72 288 IPR021109 -
Pste4g01346 536 PANTHER BETA-SITE APP-CLEAVING ENZYME, ISOFORM A-RELATED 71 534 IPR001461 GO:0004190|GO:0006508
Pste4g01346 536 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 100 111 IPR001969 GO:0004190|GO:0006508
Pste4g01346 536 Gene3D - 289 445 - -
Pste4g01346 536 FunFam Lysosomal aspartic protease 71 290 - -
Pste4g01346 536 SUPERFAMILY Acid proteases 71 535 IPR021109 -
Pste4g01346 536 Pfam Saposin-like type B, region 1 409 445 IPR007856 GO:0006629
Pste4g01346 536 ProSiteProfiles Peptidase family A1 domain profile. 85 533 IPR033121 -
Pste4g01346 536 SUPERFAMILY Saposin 293 445 IPR011001 -
Pste4g01346 536 Gene3D Acid Proteases 449 536 IPR021109 -
Pste4g01346 536 ProSiteProfiles Saposin B type domain profile. 292 332 IPR008139 -
Pste4g01346 536 ProSiteProfiles Saposin B type domain profile. 406 447 IPR008139 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01346 Pste-Chr4 9927466 9932552 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g01346 4 9927466 9932552 Pste4g01346 4 9927466 9932552 ECH
Pste5g02945 5 22288920 22294686 Pste4g01346 4 9927466 9932552 PCT