Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01335 TTTAGTTATCACTGCCCCAAACACGTGGTTTGTGTTTGTGCAATGGCCAGTCTTGGGATCCAAAAGAACAGGCACTTAACCTAGGAAAACCAACACATAATCACGTGTGAATAATATAAGTGAAGGGCATGGTACCCTAGTATTTGTCATGCACATTGATGCAAGGGCCGGTAAAGATAGACAAGCAATATTGCAATGAAAAGCATGCTGATTCCCCATACTGTTATCTGACTAAAACATTTCCAACTCAATCCTTCGTGACAAAGTAACATCGTTCAATCTAATATCATATCTTTTTCTTTTTATCATAACAACTTGGTCGTCCTTCTTTTTTGACACCTTTTTCTCCCCTTCTCACTCATCACCTTTATCTTCAACACCCCCCACCTCTCCGGGCTTTTATTCATGTTCATTGCCATTGACATGTCTTTAAAGCACTGCTGCTGCATGAATCACAATGAATTTTCAACCGGCTTATTCTTCTCCTGTCCAACTAAACTCTCTGATAATGGCAAAGGAAGCTTCTCTGTGCCTCTTGTTCCTTCTCTCCTTTCTTATTATCTCCTGTTCTGAAATATCAGCGGAGGCAGCTCAAATTCAAGTGAAAAAACAAATTTCTGGGCTTATTCATAATAGTGTCCCTCTTGTTTCACTCTTTGCAGGATCTCTGGTGCGTTTTTCCTATCGTGAGAGCGGAGACACCTCAACATCTGCTAGAACATTATCATTCCTCCAGCAAAGTAATGTTTCCTCGTCTCAGATTCGAATTTTGGTCACAGATCATAGGATTTTGAGCACTCTCAGCAACTCCAAAGTGCCAACTGATGTCTACTTAAACAAAAGTCAAGTTGAAAATCTCATTACTTCTAAATCCTCTGAATTAAAAGCTCATCTATTGAACTTTCTTCCACAGTTAAACATCGAAAACATCGTTGCTAGTTGTGGCAATGAGTACTTGGCCCAAAATGAAATGCCTTTATTCTTGCATGCTTTGAAATCAATTGGTTCAGTTCTCAGAGAGCTTCACTTAGGGAGGGAGATAAAAATCTCAGTGGCATTTCCACTTTCATTCCTAGAAAAGTTGAATGCATCGCATGAAAACGATATTCGTAGGATCCTTTCATATATAAAGGAAATGAAATCCTTTGTCATGGTAGAAGACAGCATTGATGGAGAATTAAGCATGGGGGGTCACTTTGTTCATACTATTATGAAACGAGCCACTCTTGCTGCTACCATCCTTCCTTGGAAAGATGTTTCCATTGTTCTGACAATCAAAAGCACAGTTATCCCATCTTCAATGGATTTAGCTCAATTTAGTGAGAGGGTATCCAAATATCTAGAATCCAAAACTCATATCAGAAATAGAATAGCTGCATTATATGTAGAGGTGCATTCAACAGAAGATTTTTCAAGCAAAGAGGTAAAAAGGAGAAATCTAGATGACACAACCAATCCAACAAACACAGTTTTCCCCACAAATCCAGGATCAACCACACCGATCATCACCCCCCCAGATACACCAACCATTATCACAGTTCCTGCCACCAATCCTGTCACAATTTCGCCATCCAATCCTGCTGCAATGCCTGTGACAGTTCCTTCTACCACACCTGTGCCTGTAACTCCCACAAATCCAGCCAATTCACCAACACCAGTGAGCAATCCAGCTACAACAACTCCTGTAGGGATACCACCGCCAGTAACCAACCCTGTGACATCTTATCCACCTCCATCAGGAAATGTTCCTGTCGTAAACCCTCAACCACAACCACCTCCTGCAAACACTAATGCTCCTGCCATTCAGGGACAGAGTTGGTGTGTGGCAAAGCAAGGAGCTCCTGAAACTTCTCTTCAAGCAGCACTGGACTATGCTTGTGGAATGGGTGGTGCTGATTGCTCTCAAATACAGCAGGGTGGGAATTGTTACAGTCCAGTTACTTTGCAGAACCATGCTTCCTTTGCCTTCAACAGCTACTATCAAAAGAATCCAGCTGCAACAAGCTGCTCGGGTTCATGCATTTTTCCATCGTCGTCGTCATCGCCGACAACCCCAAAGTTGTTACCTCCAACGCCACCTACACAATCTAGTCCAACACTACCACCACCAAGTCCAGTAACACCTTCACCATCAATTCCAACAGCACCACCAACATCACCATCTTCAGGAACAGGCCCTTTCGGGTATGGTGCCCCACCTTCAGTGTTAAATTCAAGCAGCCCAGAGTCAGGTACAATGCCCGGTTTTGCATCTGATAGCCCTCCTGTTGTAAATACCACGTCAGCCTCACATGCTGTGGGTCAGAGACCTTTTGTTGGCTTCACCGTTCTGATGGTATCATTTGTCACTACGAGACTGGTCAGTATGCGCCCATAGAGTTCAAAAACAAGACCATAATGTATGAGATGCTCAATATAGAGCATCTCGAGCTAGAAGTTGGACTTGTAATGTAGCATTACATTAGAAGCAGTGTGTAGGTTTGTAGGTGCAGAATGATATTAAACTACGAAGGGTAAGTGGTTATGGGCAGCCAAATGATCAAGGAGATGAGAGAATTTCTATGTGGAAATAATTGCTGCTTTATGGTATCTACTATCTAGGTTGTACAACAGACTGATTAATATTTGTCATGTACATAATTTTTTACAGCTTCTAGTTCTTTTTATTGTATGGATTTTGTAGTTCAGTGTAAATTGGTCTGAGTTGTTTTGGAAATTGATCTTCGTAAATGGCTGATTCTTATTGATCAAGCACCCCCGTTTCAAATTTTATGAAGAGAGAGACAATTAAGATTTATGAGATAGATGGATTCTCTCCAATTCTGTGGGTGCACACACCAGAAATTGCTGATACTTTGGCTAAGTATGGATTATTTCTTTATTAAGACCAATTCAACAATGTTTTCATGGCTGATGTAGCTTGTGTATCTACTTTTATAGATTTTAGTTTGCTATTGGGGACTTACACGCTTTGCCCGTCTCTGTCAAAAAAAAAATTATGGATTAAATTGTCATCGTTCATATATAAGGCAAATGCTACGACAGC 3046 0.4114 MNFQPAYSSPVQLNSLIMAKEASLCLLFLLSFLIISCSEISAEAAQIQVKKQISGLIHNSVPLVSLFAGSLVRFSYRESGDTSTSARTLSFLQQSNVSSSQIRILVTDHRILSTLSNSKVPTDVYLNKSQVENLITSKSSELKAHLLNFLPQLNIENIVASCGNEYLAQNEMPLFLHALKSIGSVLRELHLGREIKISVAFPLSFLEKLNASHENDIRRILSYIKEMKSFVMVEDSIDGELSMGGHFVHTIMKRATLAATILPWKDVSIVLTIKSTVIPSSMDLAQFSERVSKYLESKTHIRNRIAALYVEVHSTEDFSSKEVKRRNLDDTTNPTNTVFPTNPGSTTPIITPPDTPTIITVPATNPVTISPSNPAAMPVTVPSTTPVPVTPTNPANSPTPVSNPATTTPVGIPPPVTNPVTSYPPPSGNVPVVNPQPQPPPANTNAPAIQGQSWCVAKQGAPETSLQAALDYACGMGGADCSQIQQGGNCYSPVTLQNHASFAFNSYYQKNPAATSCSGSCIFPSSSSSPTTPKLLPPTPPTQSSPTLPPPSPVTPSPSIPTAPPTSPSSGTGPFGYGAPPSVLNSSSPESGTMPGFASDSPPVVNTTSASHAVGQRPFVGFTVLMVSFVTTRLVSMRP 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01335 639 MobiDBLite consensus disorder prediction 321 353 - -
Pste4g01335 639 SMART X8_cls 453 523 IPR012946 -
Pste4g01335 639 MobiDBLite consensus disorder prediction 581 609 - -
Pste4g01335 639 Gene3D Glycosidases 74 237 - -
Pste4g01335 639 PRINTS Proline rich extensin signature 393 414 - -
Pste4g01335 639 PRINTS Proline rich extensin signature 424 440 - -
Pste4g01335 639 PRINTS Proline rich extensin signature 340 356 - -
Pste4g01335 639 PRINTS Proline rich extensin signature 379 391 - -
Pste4g01335 639 MobiDBLite consensus disorder prediction 528 609 - -
Pste4g01335 639 PANTHER BETA-1,3 GLUCANASE 449 523 IPR044788 -
Pste4g01335 639 MobiDBLite consensus disorder prediction 531 568 - -
Pste4g01335 639 MobiDBLite consensus disorder prediction 330 345 - -
Pste4g01335 639 Gene3D - 448 534 - -
Pste4g01335 639 Pfam X8 domain 454 518 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01335 Pste-Chr4 9851543 9855303 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01335 415 533 Glycoside Hydrolase AT2G05790 45.455 8.55e-26 109
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g01335 4 9851543 9855303 Pste4g01335 4 9851543 9855303 ECH
Pste5g02951 5 22372119 22375152 Pste4g01335 4 9851543 9855303 PCT