Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01315 TCAGTGAGAGCATGGCCCCTGATATAAGCGCTGTGAAAACCGACACTCAGGCTAAGGCTGCTGCGGGACATTCTCGTGCTTATGTCACCTTCCTTGCTGGAAACGGTGACTACGTGAAAGGTGTGGTTGGCTTGGTCAAAGGTCTGAGGAAGGTGAAGAGCATTTACCCTCTGGTGGTTGCTGTGTTACCCGATGTTCCCAAAGAGCACCGCAACATTCTCACTTCTCAAGGCTGCATTGTTAGAGAGATTCAGCCCTTATACCCCCCAGAGAATCAAACCCAGTTTGCCATGCCATATTACGTCATCAACTATTCCAAACTACGTATTTGGGAGTTTGTGGAGTACAGCAAGATGATATACCTAGATGGTGATATCCAAGTTTTTGACAACATTGATCATTTGTTCGACTTGCCCGACAATTACTTTTACGCAGTGATGGACTGTTTCTGTGAACCCACTTGGAGTCACACTCCGCAGTATCAGATAGGTTACTGCCAGCAGTGCCCTGATAAGGTTCATTGGCCCTCCCATTTAGGGGCCAAGCCACCTCTCTACTTCAACGCTGGCATGTTTGTTTATGAACCTAATCTGGCCACTTACCATGACCTCCTTCAGACACTCCAAGTCACCAAGCCTACTTCCTTTGCTGAACAGGATTTTTTGAACATGTACTTCAAGGACAGGTATAAGCCAATTCCTAATGTGTACAATCTTGTGCTGGCCATGCTGTGGCGTCACCCTGAGAATGTTGAGCTTGAAAAAGTCAAAGTGGTTCACTACTGTGCTGCTGTGAGTGCTCAAGGATCTAAGCCTTGGAGATACACTGGGAAGGAGGAGAACATGGAGAAAGAAGATATAAAGGTCTTAGTGAAGAAGTGGTGGGATATATATGAGGATGAGACTTTGGACTACAACAATCCCCTAAATGTGGATAAGTTCACAACGGCCCTTTTGGAGGTTGGCATGGCCCCTGATATCAGCGCTGTGAAAGCCAACGTCACCGATGCTCCAGCTAAGGCCGTGGAAGGTCATTCTCGTGCTTATGTCACCTTCCTTGCTGGAAACGGTGACTACGTGAAAGGTGTGGTTGGCTTGGTCAAAGGTCTGAGGAAGGTGAAGAGCATTTACCCTCTGGTGGTTGCTGTGTTACCCGATGTTCCCAAAGAGCACCGCAACATTCTCACTTCTCAAGGCTGCATTGTTAGAGAGATTCAGCCCTTATACCCCCCAGAGAATCAAACCCAGTTTGCCATGCCATATTACGTCATCAACTATTCCAAACTACGTATTTGGGAGTTTGTGGAGTACAGCAAGATGATATACCTAGATGGTGATATCCAAGTTTTTGACAACATTGATCATTTGTTCGACTTGCCCGACAATTACTTTTACGCAGTGATGGACTGTTTCTGTGAACCCACTTGGAGTCACACTCAGCAGTATCAGATAGGTTACTGCCAGCAGTGCCCTGATAAGGTTCATTGGCCCTCCCATTTAGGGGCCAAGCCACCTCTCTATTTCAATGCGGGCATGTTTGTTTATGAGCCTAACCTTGATACATACCGTGACCTCCTTCAAACAGTCCAAGTCACCAAGCCTACTTCCTTTGCTGAACAGGCATGCACTCGCTCAATTAATCTATTTATATTATTAAGCGTGACAGACAGTATATTTATATATGCTGGATTATTAATTGTCTTGCAGGATTTTCTGAACATGTACTTCAAGGACAGATATAGGCCAATTCCGAATGTGTACAATCTAGTGTTGGCCATGTTGTGGCGTCACCCTGAGAATGTTGAGCTTGAGAAAGTGAAAGTGGTTCACTACTGTGCTGCGGGATCTAAGCCATGGAGGTACACGGGGAAGGAGGAGAATATGGAGAGAGAAGATATAAAGAAGTTAGTGAAGAAATGGTGGGATATATACGAGGATGAGAGTCTGGACTACAACAATCCCCTCAACATGGATAGGTTCACTGCGGCTCTTTTTCAGGCTGGTGGAGTCAAGTTCATCCCTGCCCCTTCTGCTGCT 2036 0.4607 MAPDISAVKTDTQAKAAAGHSRAYVTFLAGNGDYVKGVVGLVKGLRKVKSIYPLVVAVLPDVPKEHRNILTSQGCIVREIQPLYPPENQTQFAMPYYVINYSKLRIWEFVEYSKMIYLDGDIQVFDNIDHLFDLPDNYFYAVMDCFCEPTWSHTPQYQIGYCQQCPDKVHWPSHLGAKPPLYFNAGMFVYEPNLATYHDLLQTLQVTKPTSFAEQDFLNMYFKDRYKPIPNVYNLVLAMLWRHPENVELEKVKVVHYCAAVSAQGSKPWRYTGKEENMEKEDIKVLVKKWWDIYEDETLDYNNPLNVDKFTTALLEVGMAPDISAVKANVTDAPAKAVEGHSRAYVTFLAGNGDYVKGVVGLVKGLRKVKSIYPLVVAVLPDVPKEHRNILTSQGCIVREIQPLYPPENQTQFAMPYYVINYSKLRIWEFVEYSKMIYLDGDIQVFDNIDHLFDLPDNYFYAVMDCFCEPTWSHTQQYQIGYCQQCPDKVHWPSHLGAKPPLYFNAGMFVYEPNLDTYRDLLQTVQVTKPTSFAEQACTRSINLFILLSVTDSIFIYAGLLIVLQDFLNMYFKDRYRPIPNVYNLVLAMLWRHPENVELEKVKVVHYCAAGSKPWRYTGKEENMEREDIKKLVKKWWDIYEDESLDYNNPLNMDRFTAALFQAGGVKFIPAPSAA 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01315 675 SUPERFAMILY Nucleotide-diphospho-sugar transferases 345 645 IPR029044 -
Pste4g01315 675 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 20 300 IPR029044 -
Pste4g01315 675 FunFam Hexosyltransferase 20 302 - -
Pste4g01315 675 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 341 647 IPR029044 -
Pste4g01315 675 PANTHER GLYCOGENIN SUBFAMILY MEMBER 18 296 - -
Pste4g01315 675 CDD GT8_Glycogenin 22 296 - -
Pste4g01315 675 CDD GT8_Glycogenin 343 642 - -
Pste4g01315 675 FunFam Hexosyltransferase 341 551 - -
Pste4g01315 675 Pfam Glycosyl transferase family 8 347 528 IPR002495 GO:0016757
Pste4g01315 675 Pfam Glycosyl transferase family 8 26 272 IPR002495 GO:0016757
Pste4g01315 675 Pfam Glycosyl transferase family 8 565 618 IPR002495 GO:0016757
Pste4g01315 675 SUPERFAMILY Nucleotide-diphospho-sugar transferases 24 298 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01315 Pste-Chr4 9699488 9707669 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01315 319 675 Glycosyltransferase AT1G56600 66.757 1.85e-173 496
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g01315 4 9699488 9707669 Pste4g01315 4 9699488 9707669 ECH
Pste5g02812 5 20770608 20772039 Pste4g01315 4 9699488 9707669 ECH