Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01278 ATGCAACCGCTTTCGACGAAGACATTAACAATAACAAAATTGAAATTGAATAGGGTGCGAAAAGAAATGTTGCAAACCCTAGGAACCTTGAATCGCTCATGGCTCCGGAACCTGACGGTGCGTGCATTCTCTTCCTCCTCCCATTCCGATTACGGAGACCAGTCTCGTGGTGGCCTTCCCCGCTTCTACTCCGACGCTCTTCCTCCTTCCAAGGCATTCCCTTTCTTTGGTAGTATTATACGCGTGCAAGGTGATGAGTTCTGGCATATGACTAAAGTATTGAGGTTGAGCAGCAATGATAGGGTACTGCTGTTCAATGGGAAAGGAGGTCTGGTAGAAGGATGCATCCAGAACATTGACCGCACGGGACTTGATTTTGTTGCTTTGAGTGATTTGATATCAATTCCTCCACAAAATAAACAATTGCATGTATTTGCTGCTTTTGGTACTCTAAAGGGTGGGCGAGCTGACTGGCTTGTTGAGAAGTGCACAGAACTGGGAGCCAATAGTGTAACTCCTCTATTGACTAAACGTTCTCCATCAATCTCAGAAAACCGGGTGGACAGATTGGAACGTGTCATTCTAGCAGCATCCAAACAATGTCAACGACTGCATGAAATGGTCCTGAAACAATCTATAGAGATTGATGACCTTTTGCACCTTATTGAACAATCAAAGCTATCTCTTGTTGCGACCGCGAAGGCAACTCCTGTTCTTAATGCATTGACGTCATTCGAAAAGGAAACTAGTGGCTTAATCATAATTGGACCAGAAGGCGATTTCACCGAGAAAGAATTGAGTATGATGATGGAAGCAGGTGCTACAGCTGTTAGTCTCGGTCCTCATCGTCTTCGGGTTGAAACTGCCTCGATAGCTCTTTTGGCAACTGTCATGTTATGGTCTGACTCGCGGCTAACTCCAGTCTGTTGATTCCTCAATGTAGGTAGGTTAGACATGCTTGTGTTTTAGAAACAGAATATATATTTATTTTTTTTTTCTGTTAGATATAATTCATGGTAACGGATATAAACTATAAAGCATTGAAGGTCGTGTAGATCTTTTGCTTTTCTAATTGAGATGTTTCACTGTGCCTATCTGTTGGTAAAATCTAACCGTGTCAAAACACTTGGACCATGCACAAATA 1144 0.4274 MQPLSTKTLTITKLKLNRVRKEMLQTLGTLNRSWLRNLTVRAFSSSSHSDYGDQSRGGLPRFYSDALPPSKAFPFFGSIIRVQGDEFWHMTKVLRLSSNDRVLLFNGKGGLVEGCIQNIDRTGLDFVALSDLISIPPQNKQLHVFAAFGTLKGGRADWLVEKCTELGANSVTPLLTKRSPSISENRVDRLERVILAASKQCQRLHEMVLKQSIEIDDLLHLIEQSKLSLVATAKATPVLNALTSFEKETSGLIIIGPEGDFTEKELSMMMEAGATAVSLGPHRLRVETASIALLATVMLWSDSRLTPVC 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01278 309 Pfam RNA methyltransferase domain 140 297 IPR046886 -
Pste4g01278 309 CDD RsmE-like 147 295 IPR046886 -
Pste4g01278 309 FunFam uncharacterized protein LOC106771328 isoform X2 58 308 - -
Pste4g01278 309 SUPERFAMILY alpha/beta knot 141 301 IPR029028 -
Pste4g01278 309 Gene3D - 59 305 IPR029026 -
Pste4g01278 309 Pfam RNA methyltransferase PUA domain 83 127 IPR046887 -
Pste4g01278 309 PANTHER RIBOSOMAL RNA SMALL SUBUNIT METHYLTRANSFERASE E 58 304 IPR006700 GO:0006364|GO:0008168
Pste4g01278 309 NCBIfam RsmE family RNA methyltransferase 79 298 IPR006700 GO:0006364|GO:0008168
Pste4g01278 309 SUPERFAMILY PUA domain-like 74 126 IPR015947 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g01278 4 9402966 9407517 Pste4g01278 4 9402966 9407517 ECH