Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01202 ATGTCCCCTGAGCTGACTCGGTGCGCCCGGGCTCGGTGGGCTTTGCCGTCGACCAAGGAAACAATCTCTTGGATGTTTGGTGGGGCTAGCTATGACTTTCATCCTCAGCTCATAGGAAGCAGATCTTATTTTGTCAAGATGAAGTTCATGAAGCTTGGTTCCAAGCCAGATACCTTTCAGACTGATGGGAACAATGTTAGGTATGTGGCAAGTGAGTTGGCATCAGATATTGTTGTTAGTGTAGGGGATATAAAGTTTTATTTACACAAGTTTCCTCTTCTATCAAAGAGTTCTCACCTACAGACATTGATCTCCCTCAGTAATGAAGAAAATGTAGATGAAGTTCAAATTTCTGACATTCCTGGTGGTGCAAGTACCTTTGAGATATGTGCTAAGTTTTGCTATGGCATGACTGTGACCCTCAATGCTTACAATGTAATAGCAACTCGGTGTGCAGCAGAGTATCTTGGAATGCATGAGGCCATTGAGAAAGGGAACCTAATTTACAAGATTGATGTTTTCCTTAGCTCTAGCATTTTCCGTAGTTGGAAGGATTCAATCATCCTTCTTCAGACTTCAAAATCTATCTTACCCTTGGTTGAGGACCTAAAGGTTGTCAGTCATTGCATTGAATCTATAGCAAATAAGTCATGTGTTGATGTATCCAAAGTTGACTGGTCGTACACCTATAACCGGAAGAAGCTTCCAGAGGAAAATGGGATTGAGTCAAACCAGAATGGAGTCAGAACTCGGCTGGTGCCAAAAGACTGGTGGGTTGAAGATTTATGTGAGCTTGAAGTTGATTTGTACAAGTCTGTGATTTCAAATATCACATCCAAGGCAGTTCAATCTAATGAAGTAATTGGTGAAGCTTTGAAAGCATATGCATACCGAAGATTGCCAAATTTTGGCAAGGGTATGATCCAGTGTGGGGATGTGTCAAAGCATCGATTAATAGTTGAAACAATTGTGTGGTTGTTGCCTACTGAAAAAGGCAGTGTTCCATGTAGGTTCTTACTCAAGTTATTGAAGGCTGCCATTTTTGTAGAATCAGGAGATAGGACTAAAGAAGAGTTGATAAAGAGAATTAGCCAGCAACTGGAGGAGGCTTCTGTAAGTGATATATTGATTCAAGCACCAGATGGGGCTACTACAATCTATGATGTTAGTATAGTACAGAACATTGTTAGAGAGTTTTTTATGAAAGATCACAATGCTGAGATTGTATCAGTTGGGGATGGTGAACTTGAGGGGATAAGAAAACCAGGGATTTTATCAGATGCTTCCAAGCTGATGGTTGCAAAACTCATAGATGGATACCTTGCTGAAATTGCAAAAGATCCCAATTTACCATTGTCAGATTTTGTTAATCTGGCTGAGTTAGTGTCTAGCATCTCTCGTCCAGCTCACGATGGCCTTTATAGGGCTATTGACACATATCTGAAGCAGCACTCTGGGATCAGCAAAGGCGAAAAGAAGAGGATTTGCAAGCTGATGGATTGTAGAAAGCTATCAGTTGATGCATGCTTGCATGTGGTGCAAAACGAGAGACTACCGTTGCGGGTAGTTGTGCAGGTACTATATTTTGAGCAGTTAAGGTCTGCTGCATCATCAGGCACTAGCACTCCTGACATACCTAGGGGTATCAAAGACTTGAACAATGAATCCAATGGAAGCTCAAGGTCAGGAACAACTAACCCAGAAGATGAGTTGGATGCTGTGGCCACAGCTGAGGAGCTGAAGGCATTAAGAAAGGAACTTGCATCATTGAGGCTGAGCAATGGGGTTGGAAACAATGACAAAGATGGAGATATCAAACCCTGCATGGACAAGGCTGTCATTGGCAAGGTTAAAGGGTTGCTCAAGTCAAAGAAGTCGTTTATTAAGCTTTGGGCCAGCAAAGGGGGACAAGGGGAAAATAGTGGCTCTGACTCATCAGAGAGTATTAGTTCTGCTAACCCAGAAGAAGCCAAATCTACTCCATCAAGAAATAGGAGGCATTCAGTTTCCTGAAAGTAGTTTGGTTCATTTTGTTGGCATTTCTATTATTGTTTTTTTTACCAGTTTCACTAAGACGACAAAATTCCCAACACTAGTGGTTTATCCCTTCTAAATGGAGTAGAGTACATATAGTTTAAAACAGTAGAATTGTGAAGAATGGAAATCATGTAATCCAAACACCCTATCAATAGTCGTTTAAACTGCCCTTTGCACTTCATCAAAATTGGAACATCTCCCAATACTTCAAGGAACCTGATAGTATAAACTGAAGGGCAAAATTTAGATACAATATTTTAGGGAGTTTTATCTTTTTTAATCTCTGTAATCTTTTAACGTGGTGAAAATACAATTATGTAGATTATTGAGATGAAATTACAATTTTAAATGAAGATCCAAAACAAAGACA 2407 0.4034 MSPELTRCARARWALPSTKETISWMFGGASYDFHPQLIGSRSYFVKMKFMKLGSKPDTFQTDGNNVRYVASELASDIVVSVGDIKFYLHKFPLLSKSSHLQTLISLSNEENVDEVQISDIPGGASTFEICAKFCYGMTVTLNAYNVIATRCAAEYLGMHEAIEKGNLIYKIDVFLSSSIFRSWKDSIILLQTSKSILPLVEDLKVVSHCIESIANKSCVDVSKVDWSYTYNRKKLPEENGIESNQNGVRTRLVPKDWWVEDLCELEVDLYKSVISNITSKAVQSNEVIGEALKAYAYRRLPNFGKGMIQCGDVSKHRLIVETIVWLLPTEKGSVPCRFLLKLLKAAIFVESGDRTKEELIKRISQQLEEASVSDILIQAPDGATTIYDVSIVQNIVREFFMKDHNAEIVSVGDGELEGIRKPGILSDASKLMVAKLIDGYLAEIAKDPNLPLSDFVNLAELVSSISRPAHDGLYRAIDTYLKQHSGISKGEKKRICKLMDCRKLSVDACLHVVQNERLPLRVVVQVLYFEQLRSAASSGTSTPDIPRGIKDLNNESNGSSRSGTTNPEDELDAVATAEELKALRKELASLRLSNGVGNNDKDGDIKPCMDKAVIGKVKGLLKSKKSFIKLWASKGGQGENSGSDSSESISSANPEEAKSTPSRNRRHSVS 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01202 670 PANTHER OS12G0117600 PROTEIN 69 647 IPR043454 -
Pste4g01202 670 Gene3D Potassium Channel Kv1.1; Chain A 49 167 IPR011333 -
Pste4g01202 670 MobiDBLite consensus disorder prediction 633 670 - -
Pste4g01202 670 MobiDBLite consensus disorder prediction 552 569 - -
Pste4g01202 670 Pfam BTB/POZ domain 72 164 IPR000210 GO:0005515
Pste4g01202 670 Coils Coil 573 593 - -
Pste4g01202 670 ProSiteProfiles BTB domain profile. 75 143 IPR000210 GO:0005515
Pste4g01202 670 MobiDBLite consensus disorder prediction 636 658 - -
Pste4g01202 670 MobiDBLite consensus disorder prediction 537 570 - -
Pste4g01202 670 SUPERFAMILY POZ domain 67 163 IPR011333 -
Pste4g01202 670 ProSiteProfiles NPH3 domain profile. 256 533 IPR027356 -
Pste4g01202 670 CDD BTB_POZ_NPY3-like 66 170 - -
Pste4g01202 670 Pfam NPH3 family 256 509 IPR027356 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01202 Pste-Chr4 8834774 8839776 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01202 54 539 EF-hand Containing Proteins AT3G44820 35.509 1.39e-97 311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g01202 4 8834774 8839776 Pste4g01202 4 8834774 8839776 ECH