Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01178 AGAAGACTCACAAGTCACAACCAATGCGTGTGACTTTTCCACTCATCTCCAATTTGAACCATAATATAATAATTTGACCATGACCCACTCTTCTTTTTTCCAACCACTGCCAACTTGGTCCACTTTTCTTCTCTTCTCTCATTTTTAGTCCTAACTCTTCACCCTTTTTTCCTTCTACTTTCTAAAGTTTGGCCCTTTCTTTCTTGCTTTCTCTCACCAAAAATTTGCTCACAAAGAAGGAAGAATGGCACCTTTCATTTCCCTCTCTTTGTTCTTGTTCTTTCTCCATTACCCCCTCCTATCCCTCTCAACCAACCCTGAAGGGAACGCTCTGCATGCTTTGAGAAGCAGGCTTTCTGATCCCAACAATGTGTTGCAGAGTTGGGACCCAACTCTGGTTAATCCCTGTACTTGGTTCCATGTTACCTGTGACTCCAACAATCATGTGATTCGCTTAGACTTGGGCAACTCTAACGTTTCTGGGACTCTGGGCCCAGAACTTGGCCAGCTACAACATTTGCAGTACTTGTATGGTCTTCTCTTTCCCATTATAGCTGAGAAGGAGCTATATAGGAATGAGTTAAGTGGAAAGATTCCTCGGGAACTTGGTAACTTGAAATCACTTATTAGCATGGATTTGTATGACAACAAGTTGGAGGGGAAGATTCCAAAGTCATTTGGAAAGATGAAGTCACTTAAATTTCTGCGGCTAAACAACAACAAGTTGACAGGATCAATCCCAAGAGAACTCACTCATCTCACTGATCTCAAAATCTTAGATGTTTCTAATAATGATCTCTGTGGAACAATACCAGTAGAGGGCAACTTTGAATCTTTCCCTATGGAAAGTTTTGAAAACAACAGGTTTAGTGGTCCTGAGCTGAAAGGACTTGTTCCATATGATTTTGGATGCTGAAGGAAGATAAAAGTAGTTTACGTAGGGAGGGAGTATTAGAAAGGGTGAAGATGGTATTATTTCCACATCAATATTTCCTCACCGTTTTCACACTTAATTGGGAAAAGAGGGAGAATTGGATGGAATCTATGTTTTTCTTATTTTATTATAAAAAAGGAAGTGATGTAATGTTCTGAAAAACAATTGTATGTAAATAACATTATTGATGTATGCTTGACCATATAAAACTTGATTGTCCATTTATCTAATAACATGACTGATATCATGGCAT 1187 0.3884 MAPFISLSLFLFFLHYPLLSLSTNPEGNALHALRSRLSDPNNVLQSWDPTLVNPCTWFHVTCDSNNHVIRLDLGNSNVSGTLGPELGQLQHLQYLYGLLFPIIAEKELYRNELSGKIPRELGNLKSLISMDLYDNKLEGKIPKSFGKMKSLKFLRLNNNKLTGSIPRELTHLTDLKILDVSNNDLCGTIPVEGNFESFPMESFENNRFSGPELKGLVPYDFGC 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01178 223 Pfam Leucine rich repeat N-terminal domain 24 63 IPR013210 -
Pste4g01178 223 Gene3D Ribonuclease Inhibitor 23 214 IPR032675 -
Pste4g01178 223 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 7 201 - -
Pste4g01178 223 FunFam Somatic embryogenesis receptor kinase 1 22 218 - -
Pste4g01178 223 SUPERFAMILY L domain-like 25 211 - -
Pste4g01178 223 Pfam Leucine rich repeat 130 185 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01178 Pste-Chr4 8737372 8740095 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01178 4 206 Receptor kinase-like Gene Family AT1G71830 58.128 2.98e-68 218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g01178 4 8737372 8740095 Pste4g01178 4 8737372 8740095 ECH