Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01039 ATGCAAAACCTCAATTTCCTCTGCCTAACCATCAGTTGCCTCTGGCTCATACCCTTTGTGGCACAATCCCTGACCTCAGCCTCAGACATAGCAGCCCTCAAAGCCTTGAAGGCTTCAATCAAACCCTCATCCATAACACCCTGGTCATGCCTCGCCTCATGGAACTTCACAACCGACCCATGCTCAGTCCCTCGACGCACCTACTTCATCTGCGGCCTCACCTGCACCCCTGACTCCGCAAGAATCAACCAGATTACTCTCGACCCAGCAGGCTACTCAGGCACACTCACCCCACTCATCTCTCACCTCACACAACTCACCACACTAGACCTCGCCGAAAACAACTTCTTCGGCCCAATCCCCGCTTCTATTTCCTCCCTCTCCAACCTCCAAACCTTAACCCTCCGATCCAATTCCTTCTCAGGTCCAATCCCTCCCTCCATAACAACCCTCAAATCACTTCAATCCCTCGACCTCGCACACAATTCTCTCTCTGGGAATCTCCCAAACTCCATCAACTCCCTCACCACACTCCGCAGGCTCGACCTCAGCTTCAACAAACTCACCGGTTCAATTCCCAAGCTCCCACCCAACTTGCTTGAACTCGCGATCAAGGCCAACTCTCTATCTGGGCCTCTCCAAAAACAGAACTTTGAAGCGCTGAAGCAGTTGGAAGTGGTGGAGCTCAGCGAGAACGCGCTCACCGGAACCGTGGACTCGTGGTTCTTCCTTCTACCGTCGCTGCAGCAAGTGGACTTGGCCAACAACACCTTCACGGGAGTGCAGATCTCAAGGCCACCCTCGGCGCATGGGGGAACCAGCAACAGCAACCTCGTCGCGCTCAACCTCGGCTTTAACAGAATCCAAGGCTACGCGCCCACGAATCTCGCCGCGTATCCCGCGTTGTCGTTCCTGTCGGTTCGCTACAACGCGCTGCGTGGCGCCATCCCGCTGGAGTACGGGCAGATCAAGTCTATGAGGAGGCTCTTCCTCGACGGAAATTTCCTGGTGGGGAAACCGCCGCCGGAGCTGGTTTCCGCCGGCACTGCTGTTTCCGGTAGCTTGGGGGATAATTGTCTGCAGGCGTGTCCAGGGTCGTCGCAGCTGTGCTCGCCCGCGCAGAAACCCTCCTCTGTTTGCAAGCAAGCCTACCGTGGCTTTAGATATGAAGTGTGTGATGGGTCCGGCTACCGTCCACCATCAGAGGTTTATGTCTGTCTTGGAGTTGAAGGAAGTCCCCACCGACTAGCCGTCAAAAACGTCTCCATATCTGCTATTAAATTGCCTCTGTTGACTAAATACCTCAAACATACTCATCATTGTTATAAGAATATTAAACTCCAATGA 1347 0.5412 MQNLNFLCLTISCLWLIPFVAQSLTSASDIAALKALKASIKPSSITPWSCLASWNFTTDPCSVPRRTYFICGLTCTPDSARINQITLDPAGYSGTLTPLISHLTQLTTLDLAENNFFGPIPASISSLSNLQTLTLRSNSFSGPIPPSITTLKSLQSLDLAHNSLSGNLPNSINSLTTLRRLDLSFNKLTGSIPKLPPNLLELAIKANSLSGPLQKQNFEALKQLEVVELSENALTGTVDSWFFLLPSLQQVDLANNTFTGVQISRPPSAHGGTSNSNLVALNLGFNRIQGYAPTNLAAYPALSFLSVRYNALRGAIPLEYGQIKSMRRLFLDGNFLVGKPPPELVSAGTAVSGSLGDNCLQACPGSSQLCSPAQKPSSVCKQAYRGFRYEVCDGSGYRPPSEVYVCLGVEGSPHRLAVKNVSISAIKLPLLTKYLKHTHHCYKNIKLQ 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01039 448 Gene3D Ribonuclease Inhibitor 196 369 IPR032675 -
Pste4g01039 448 SUPERFAMILY L domain-like 71 360 - -
Pste4g01039 448 Pfam Leucine rich repeat 128 188 IPR001611 GO:0005515
Pste4g01039 448 Pfam Leucine rich repeat 197 256 IPR001611 GO:0005515
Pste4g01039 448 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 8 382 - -
Pste4g01039 448 FunFam Nuclear pore complex protein NUP107 26 194 - -
Pste4g01039 448 ProSiteProfiles Leucine-rich repeat profile. 177 199 IPR001611 GO:0005515
Pste4g01039 448 SMART LRR_typ_2 151 174 IPR003591 -
Pste4g01039 448 SMART LRR_typ_2 221 244 IPR003591 -
Pste4g01039 448 SMART LRR_typ_2 245 266 IPR003591 -
Pste4g01039 448 SMART LRR_typ_2 175 202 IPR003591 -
Pste4g01039 448 SMART LRR_typ_2 103 127 IPR003591 -
Pste4g01039 448 Gene3D Ribonuclease Inhibitor 27 195 IPR032675 -
Pste4g01039 448 Pfam Leucine rich repeat N-terminal domain 27 62 IPR013210 -
Pste4g01039 448 PRINTS Leucine-rich repeat signature 154 167 - -
Pste4g01039 448 PRINTS Leucine-rich repeat signature 175 188 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01039 1 362 Receptor kinase-like Gene Family AT1G17750 30.220 1.74e-34 135
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g01039 4 8052601 8054231 Pste4g01039 4 8052601 8054231 ECH