Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00475 ATGCTCTACTTCCTCAAAAGATTATGCCTTGTATGTTTCCTCTTACTATTCTTTGATGTTTCACTGTGTTCATGTGCTTCACTCAGAACCTTGGCTTCTTGCTTGGATCATCATAATATAAAAAACTTTACCACGCTCCCTTACAAAGAACGTGATCAGTCCTCTTCATATAATTACTTCAAAATTCTTAATTTTTCCATTCAAAACCTTCGGTTTGCAGAACCCGTGATTCCTAAGCCAATTGCCATTGTACTGCCAGAGAGTTTGGAGCAGCTACAGAAAAGTGTAGCATGCTGTAGAGAAAGCTCCTTGGCAATCAGAGTAAGATGTGGTGGACACAGCTATGAAGGGACTTCTTATGTTGCTGATGATGGTACTCCTTTTGTCATCATTGATATGATGAATATGAACCATGTTTGGGTGGACATGGAGACAGAAACAGCATGGGTTGAAGGTGGTGCAACATTGGGAGAGACATATTATGCAATATCTCAGGCAAGCAATGAACATGGATTCTCAGCTGGGTCATGTCCAACTGTTGGAGTTGGAGGGCACATTGGTGGTGGAGGATTTGGGTTGTTGTCTAGAAAGTATGGTCTTGCAGCAGATAACGTGGCGGATGCCCTTCTAGTTGATGCTGATGGAAAATTGTTTAACCGTGAAACCATGGGAGAAGATGTGTTTTGGGCTATTAGAGGAGGAGGAGGTGGTCTATGGGGGATAGTTTATGCCTGGAAAATCCAGATGTTGAAAGTGCCACAACTTGTAACTAGTTTCATTATATCTAGAACAGGCACCAAAAGTCATGTTGCCATGTTAGTGAACAAATGGCAATATGTGGCACCCAAATTGGAAGATAACTTCTACTTGTCATGCTTCGTTGGTGCTGGTTTGCCCCAAGCTAAAACCACAGGGTTATCAACAACATTTAAGGGCTTCTATCTTGGTCCTAAGGCCAGTGCCATATCCATCCTAAACCAGGCTTTTCCTGAGTTGGGTATTGTAGAAGAAGAATGCATAGAAATGAGTTGGATTCAATCAATTGTTTTCTTCTCTGGCCTAAGTGATGGAGCCTCGGTCTCTGACTTGAAGAACAGGTATCTAGAAGAAAAAGAATATTTCAAGGCCAAATCCGATTATGTGAAGAAGCATGTTCCTCCTGTGGGCATAGAAACTGCACTGGACATACTAGAAAAGGAGCCTAAGGGACATGTTATTCTGGACCCTTATGGTGGAAAGATGCATAATATAAGCAGTGAGTCTATTGCTTTTCCCCATAGAAGAGGAAACTTGTTTACAATTCAGTATCTGATCTATTGGAAAGAAGGTGACAATGACAAAAGCAGTGATTATGTTGATTGGATAAGAGGGTTCTATGCTGCTATGACTCCCTTTGTTTCATGGGGTCCAAGGGCAGCATATATTAATTACATGGACTTTGACCTTGGAGTGATGGAGCGGATTAGTAATGGTGCTAATATGAAAGATGCTGTGGAACATGCAAGGGTTTGGGGCGAAAAGTACTTCTTGAGTAACTATGACAGACTGGTGAGGGCTAAGACTCTGATTGATCCTGACAATGTTTTCACCAATGAACAGGGCATTCCTCCCATATCTTTGACCACTCCCAATTTCAAAGCACAATGA 1647 0.4177 MLYFLKRLCLVCFLLLFFDVSLCSCASLRTLASCLDHHNIKNFTTLPYKERDQSSSYNYFKILNFSIQNLRFAEPVIPKPIAIVLPESLEQLQKSVACCRESSLAIRVRCGGHSYEGTSYVADDGTPFVIIDMMNMNHVWVDMETETAWVEGGATLGETYYAISQASNEHGFSAGSCPTVGVGGHIGGGGFGLLSRKYGLAADNVADALLVDADGKLFNRETMGEDVFWAIRGGGGGLWGIVYAWKIQMLKVPQLVTSFIISRTGTKSHVAMLVNKWQYVAPKLEDNFYLSCFVGAGLPQAKTTGLSTTFKGFYLGPKASAISILNQAFPELGIVEEECIEMSWIQSIVFFSGLSDGASVSDLKNRYLEEKEYFKAKSDYVKKHVPPVGIETALDILEKEPKGHVILDPYGGKMHNISSESIAFPHRRGNLFTIQYLIYWKEGDNDKSSDYVDWIRGFYAAMTPFVSWGPRAAYINYMDFDLGVMERISNGANMKDAVEHARVWGEKYFLSNYDRLVRAKTLIDPDNVFTNEQGIPPISLTTPNFKAQ 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00475 548 Gene3D - 255 469 - -
Pste4g00475 548 Gene3D - 141 537 IPR016169 -
Pste4g00475 548 Pfam FAD binding domain 80 218 IPR006094 GO:0050660
Pste4g00475 548 SUPERFAMILY FAD-binding/transporter-associated domain-like 70 253 IPR036318 GO:0050660
Pste4g00475 548 Gene3D - 30 136 IPR016167 -
Pste4g00475 548 ProSiteProfiles PCMH-type FAD-binding domain profile. 76 252 IPR016166 GO:0071949
Pste4g00475 548 PANTHER OS08G0158400 PROTEIN 27 538 - -
Pste4g00475 548 Pfam Berberine and berberine like 473 536 IPR012951 GO:0016491|GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00475 Pste-Chr4 3592893 3594539 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00475 60 536 Miscellaneous Gene Families AT1G30760 42.975 5.53e-129 386
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g00475 4 3592893 3594539 Pste4g00475 4 3592893 3594539 ECH