Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00457 GATGGAGTTAGCAGATAGCTGGATATGGAAGCAGAAGCAACGATTATGAAATGACGAAATTGGCCCCATATGTGCATCAAATACTCGTTCCTCTGTGCAGAGTCTTTCGCATATTCTTCTTCCTCCTCGTCGTCTTCGTCTTCCTCTGATACCAAAACCCGTTCTTTCTTCGCAAGATCCAGAATGGCATTCCCTTTTGTTTGTTGACGTATTGATGAAAATGGGAGTTCAACGACATACTGCGCTGTCTGAAGACAAAGACCCTGCTGAAAATGCTTGTGCCAGTAGTTCTTTGAGCGAAGGTGCTCTTCCCAGTGAGTCTACTGACAACAATCAAAGTGTAAATACTGAAAGTAGTGAATTTAATGAACCAGGTGATGTTTCTCATAAGAAAAGTAATACACCACATATCTATAGACAAGATGTTGTGAAAAACAATATCAGTGGCATGATTGGGATTGTAACCGAAGTTGCTGGTGATTCGGATTCGGATTCAGATAGCAGCATCACTGATGATGAGAATGATAGTGATGACGAGGATGGTGATGATGAGGAAGGTGATGACAGTAATAATACTAGTAGAAATTCTGAAAGTAATGGTGCTGCTGGGCATTGTAAAAATGATGCTCTTCTGGCTGATCAGCTGCGTGTATTGTGGATGGACGAATCTGAATCCACTCAAAATTTCAGTGATGTTGAAGTTGTTGATCGAGGATTTTTACATGGGGATTTTGTTGCTGCTGCTTCAGACCCTACTGGTCAAGTGGGTGTAGTGGTTGATGTTAATATATGTGTGGATCTATTGGCCCATGATGGCTCTGTAATAAAAGATATATCATCAAAAAACTTAAAGCGCATTAGGGATTTCACTGTTGGTGATTATGTGGTGCTTGGGCCCTGGTTAGGCAGAGTTGATGATGTTTTGGATAATGTAACCGTCTTATTTGATGATGGTTCTGTTTGTAAAGTGTCAAAAGCTGATCCATTGAATCTTAAACCAATTTCTAAGAATATTCTTGAAGATGGGCATTTTCCTTATTACCCAGGGCAACGGGTAAGGGCTAGCTCCTCATCTGTTTTCAAGAATTCAAGATGGCTATCTGGCTTGTGGAAAGCTAATAGGCTAGAAGGTACTGTCACCAAAGTTACGGTTGGATCAGTGTTTGTTTATTGGATAGCATCTGCAGGTTATGGGCCATATTCATCTACTGCTCCTGCTGAGGAGCAGAGCCCTAAAAACTTAAAATTGTTGTCTTGTTTTGCTCATGCAAATTGGCAATTGGGTGACTGGTGTCTCTTACCCTCATCAGTACTGTCATGCTCAGCTTCCATGGACAAAGGCATGTCAAAATTGGAACTTAACGATTCTGCTAACAACGAATTAGATTCTAATCAGACTGGAAGTGGATGTGATTCAGAAGAAACTACAGTTGAGGAAAAAAATGGGAATAAGGATACCATGGACCTTGATCAAGCTGATGTTTTGGAAGGGAAGGATAGAAATGATAAAAGTAATCCTTCACGTGATTCTAGCTCCTGCGGTAGTTCTATCTCTGTATCAAAGGAACCTGTTCATGAAGCTTGGCCACTTCACCGAAAGAAAATTAGGAAAGTGGTAATCAGGAAAGAAAAAAGGGCCCGAAAGAAAGAGGAAAGTTTTGAAAAAGCTCTTTTGATTGCAAACACAAGCACAAAAGTTGATGTTGCATGGCAGGATGGAACAATAGAGCATGAACTAAACTCTACAAGTTTAATTCCTATAGATAATCCTGGTGATCATGAATTTGTTTCAGAACAATATGTGGTAGAAAAGACCTCTGATGATGGTGAGGATATTTCTGAAGCTAGGCGAGTTGGGGTTGTGAGAAGTGTTAATGCAAAGGAGCGGACAGCTTGTGTGAGGTGGTTAAAAAAAGTTGCTAGAGCAGAAGATCCTCGAGAGTTTGACAAGGAGGAAGTTGTAAGTGTGTATGAGCTAGAGGGTCATCCAGATTATGATTACTGCTACGGGGATGTGGTTGTTCGCCTGTCACCTGTGTCTGTAACAGCTTCTGTTGGAGAGCCAAGTGAGAAATTAAAGCAGAAAACTGAAGAGAGTGGGGTTAATATTGAAGTAAACATCCAAACTAGTGCTAATAAAGTAGAAAACATTTCTGCTGAAACTTGTATCCAATTTTCTGACCTCTCTTGGGTTGGAAATATAACTGGCCTTAAGAATGGTGATATTGAAGTTACTTGGGCTGATGGAATGGTGTCAACGGTTGGACCCCAAGCAATCTATGTGGTTGGGCGAGATGATGATGATGAATCAATTGCTGCTGGGAGTGAAATAAGTGATGCTGCAAGTTGGGAAACTGTTAATGATGAAGAAATGGAAGTCCTAGAGGATTCCAGAGAGGATAGTGAAAAGGAAAATTCAAGCAGTGTTACGTCTGAGGAAGAAGAAACTGGTGAGAATGATTTTGGTAGGGCTGCAGCTCTTTCTGTTCCCCTAGCAGCATTTCGATTTGTCACTAGACTTGCCAGTGGAATATTCTCAAGGGCCCCAAGGAACTTGGATCCTATTCAGTCGCAGATAAAAGATGAACATGAACATCCATCATCAGTAGTTGATGATGAGTCTAGTTCACAGAAACATATTGTCATTGATGGTGATAATTCAGGCAATAAGAATGAAAGGTATGAGGAGGTTGTTTCTGAAGCAACTGAAACTCTTGAAGCTTGTAGTAACAACCGGAAATGGTTTAAGAAAGTGCAACAAGATTGGAGCATACTGCAGAATAACCTTCCAGAGGAAATCTATGTTCGAGTTTATGAAGATAGAATGGATCTATTGAGAGCAGTTATTGTAGGGCCATATGGAACCCCTTACCAAGATGGACTCTTTTTCTTTGATTTTCACCTTCCACCAGAATATCCTGATGTTCCACCGTCAGCATACTATCATTCTGGTGGTTGGCGGATTAACCCTAATTTGTATGAGGAAGGGAAGGTTTGCCTTAGCCTTCTAAATACATGGACAGGCAGAGGAAATGAAGTATGGGATCCAAAATCTTCTAGCATCCTTCAAGTCCTAGTTTCACTGCAAGGTTTAGTACTCAACTCTAAGCCTTACTTCAATGAAGCTGGCTATGATAAGCAGATTGGAACAGCAGAAGGAGAGAAAAATTCGTTATCATACAATGAGAATACCTTTTTACTTAACTGCAAGACTATGATGTATCTTATGAGGAAACCCCCCAAGGATTTTGAAGTGCTCGTCAAGGAACATTTTAGGAGGCGGGGTCATAACATCCTTAAGGCTTGTGATGCATATATGAAAGGTTACTTGATTGGCTCACTGACTAGAGATGCCTCTGTAAGTGAAAAGAGCAGTCAGAATTCAACCTCTGTGGGTTTCAAGTTGATGTTAGCCAAGATAGTGCCAAAGCTTTTCCTATCACTAAGTGAGGTTGGAGCTGATTGCGAGGAATTTAAGCATCTCAAAGATTTGTAGTGAAGTGATATGGGGATACATCACCTCCTTAAAGCCAACTTGGTCTGCTGACTCCGCCCAAACTTAAAATATTTGAAGGTACCAACAAGTGTAAAGGTTCTCATAGAATCTACTATTTGTTCCCTCTCGTTACTCTTGTTTAAAAGATCAATTCACTTCTAGGGGCATGAAGGAACTGAATTGGTGGGAGTTATTTACATTGAGAGAAGCAACCACTGACACAGCAGGCAGGATATCCTTTTGATTTTGCTCACCTGATGTGGGGGGCAATGTTGGTCGCTAACTTGTATGCAGTTCACCTTTTTTCTTGATTTTTTTATTTCTTTGATATCTGGGGGTTAACCGAGCCCAATGGCGTCGTGTGATCCATGTAGCCAATTTCACTCGCTGAGATAAGGCTTTTGTTGTTGTTTTATATCTCTGGGGACAAGGTGGGGGGTTGGATTTTCACAGGTATTTGAAAGGGTTTTGTTGTCTTTGCATTGATTGATTTACATTCTGTTACATGAATTGATATAATTGAACAATCACTTCCTGCGCTCCCCACCCCTTCCCCTCTCTTATACAATGGATACTTCATGTTTCTGC 4084 0.4084 MKMGVQRHTALSEDKDPAENACASSSLSEGALPSESTDNNQSVNTESSEFNEPGDVSHKKSNTPHIYRQDVVKNNISGMIGIVTEVAGDSDSDSDSSITDDENDSDDEDGDDEEGDDSNNTSRNSESNGAAGHCKNDALLADQLRVLWMDESESTQNFSDVEVVDRGFLHGDFVAAASDPTGQVGVVVDVNICVDLLAHDGSVIKDISSKNLKRIRDFTVGDYVVLGPWLGRVDDVLDNVTVLFDDGSVCKVSKADPLNLKPISKNILEDGHFPYYPGQRVRASSSSVFKNSRWLSGLWKANRLEGTVTKVTVGSVFVYWIASAGYGPYSSTAPAEEQSPKNLKLLSCFAHANWQLGDWCLLPSSVLSCSASMDKGMSKLELNDSANNELDSNQTGSGCDSEETTVEEKNGNKDTMDLDQADVLEGKDRNDKSNPSRDSSSCGSSISVSKEPVHEAWPLHRKKIRKVVIRKEKRARKKEESFEKALLIANTSTKVDVAWQDGTIEHELNSTSLIPIDNPGDHEFVSEQYVVEKTSDDGEDISEARRVGVVRSVNAKERTACVRWLKKVARAEDPREFDKEEVVSVYELEGHPDYDYCYGDVVVRLSPVSVTASVGEPSEKLKQKTEESGVNIEVNIQTSANKVENISAETCIQFSDLSWVGNITGLKNGDIEVTWADGMVSTVGPQAIYVVGRDDDDESIAAGSEISDAASWETVNDEEMEVLEDSREDSEKENSSSVTSEEEETGENDFGRAAALSVPLAAFRFVTRLASGIFSRAPRNLDPIQSQIKDEHEHPSSVVDDESSSQKHIVIDGDNSGNKNERYEEVVSEATETLEACSNNRKWFKKVQQDWSILQNNLPEEIYVRVYEDRMDLLRAVIVGPYGTPYQDGLFFFDFHLPPEYPDVPPSAYYHSGGWRINPNLYEEGKVCLSLLNTWTGRGNEVWDPKSSSILQVLVSLQGLVLNSKPYFNEAGYDKQIGTAEGEKNSLSYNENTFLLNCKTMMYLMRKPPKDFEVLVKEHFRRRGHNILKACDAYMKGYLIGSLTRDASVSEKSSQNSTSVGFKLMLAKIVPKLFLSLSEVGADCEEFKHLKDL 1093
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00457 1093 Gene3D Ubiquitin Conjugating Enzyme 796 1074 IPR016135 -
Pste4g00457 1093 MobiDBLite consensus disorder prediction 19 51 - -
Pste4g00457 1093 Pfam Ubiquitin-conjugating enzyme 847 991 IPR000608 -
Pste4g00457 1093 MobiDBLite consensus disorder prediction 402 435 - -
Pste4g00457 1093 MobiDBLite consensus disorder prediction 94 116 - -
Pste4g00457 1093 Coils Coil 820 840 - -
Pste4g00457 1093 SMART ubc_7 845 1002 - -
Pste4g00457 1093 MobiDBLite consensus disorder prediction 727 749 - -
Pste4g00457 1093 MobiDBLite consensus disorder prediction 720 750 - -
Pste4g00457 1093 FunFam Probable ubiquitin-conjugating enzyme E2 23 819 1081 - -
Pste4g00457 1093 MobiDBLite consensus disorder prediction 386 401 - -
Pste4g00457 1093 PANTHER (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME 88 1084 - -
Pste4g00457 1093 SUPERFAMILY UBC-like 833 1009 IPR016135 -
Pste4g00457 1093 CDD UBCc 845 995 IPR000608 -
Pste4g00457 1093 MobiDBLite consensus disorder prediction 789 818 - -
Pste4g00457 1093 MobiDBLite consensus disorder prediction 85 134 - -
Pste4g00457 1093 MobiDBLite consensus disorder prediction 52 66 - -
Pste4g00457 1093 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 842 1002 IPR000608 -
Pste4g00457 1093 MobiDBLite consensus disorder prediction 1 67 - -
Pste4g00457 1093 MobiDBLite consensus disorder prediction 386 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00457 Pste-Chr4 3480058 3490878 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00457 165 365 Miscellaneous Gene Families AT2G33770 41.584 1.47e-49 188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g00457 4 3480058 3490878 Pste4g00457 4 3480058 3490878 ECH