Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00456 CTAGCTCCTCATTTAAAAGGATTGGGAAGAGAAGGCTAGTGCTTATTAGTTAAAAGATTGTTCAACTTTCTACGAATAAATAAAGAAAGTAATAATGGAGTCACCAGTTGAAGATATTGTGATTGTGGGAGCTGGAATTGCTGGACTCGCAACATCCTTGGCTCTTCACAGGTTGGGGGTCCGAAGTTTGGTGTTAGAATATTCGGATAGTTTAAGGGTGACTGGGTTTGCTTTAACAACGTGGACAAATGCTTGGAAAGCCTTGGACGCTCTTGGCGTCGGAGACATTCTTCGTCACCAACATCTGCAGTTAAAAGAGAATGTGACTACATCTTTGAGTATGGGGCAAGAGACATCAAGCTTGTCTTTGAAGGGAACAGGAAAACATGGGGACGGTGAAGTGCGTTGTGTTAGAAGGCAGTTAATGTTAGAAGCACTTGCTAAGGAGCTTCCAAGTGGCACCATTAGGTACTTGTCCAAGGTTGTTGGTATTCAGGAATGTGGGTTTTGTAAGATACTCCATCTTGCCGATGGAAGAAGCATCAAAACCAAGGTTTTGATTGGGTGTGATGGAATAAACTCGGTGGTGGCAAAGTGGCTAGGCTTCAAGGAGGCGCGTTTTACAGGGAGATACGTAATAAGGGGCAATACAAAGTTGATGGGCAATCATGGGCTTGAGCCAAAATTCAGGCACTACTTTGGGAAAGGGTTTCGATCTGGTGTAATGCCTTGTGATGAAAAGACTGTTTATTGGTTTTTAACTTGGACTCCCACCACTCAAGAGAAGGAGGAAGCAAAGAAGGCATCCAAAATGAAAGAACTGGTGTTGAGGAAGCTTGAGAAGATGCCAAATGATATTAGATGGTTGATAGAGAAAACAGAAGAGAAAGACATTTTAACATCTCCGTTAAGATATAGACGACACTGGGAGCTGATGTTGGGGAAGATCAGCAAAGGGAACATATGTGTTGTGGGAGATGCATTTCACCCGATGGCCCCAGACCTGGGCCAAGGTGGGTGTTGCGCCTTGGAGGATGCCATTGTTTTAGCCAGGTATCTTGCTCATGTTATGAAGATGGGCCAAGATCAGCTTAAGCCTAAGGACCAATACAAGAAGATTGAGGCCAGCTTGACCAAATATTCAAATGAGAGACGATGGAGAAGCATTGATATTAGTGTTACATCTTTTATTCTTGGCTTTGTTCTGCAGGCTGATTCCAAATTGCTTGCACTTGTTAGGGACAAACTTTTCCCTCATTTCCTAGCCCAGTTGTTGTTGAACAAGTCACATTTTGATTGTGGAAAACTTGACAACTCTAATTGATATGTTATTACCATCCCTTCTCCATGCCCATTTGTCTCCCACCTCCTACTTCTAAACAAAATATATGTACTCCTTTTCTGCCA 1407 0.4293 MESPVEDIVIVGAGIAGLATSLALHRLGVRSLVLEYSDSLRVTGFALTTWTNAWKALDALGVGDILRHQHLQLKENVTTSLSMGQETSSLSLKGTGKHGDGEVRCVRRQLMLEALAKELPSGTIRYLSKVVGIQECGFCKILHLADGRSIKTKVLIGCDGINSVVAKWLGFKEARFTGRYVIRGNTKLMGNHGLEPKFRHYFGKGFRSGVMPCDEKTVYWFLTWTPTTQEKEEAKKASKMKELVLRKLEKMPNDIRWLIEKTEEKDILTSPLRYRRHWELMLGKISKGNICVVGDAFHPMAPDLGQGGCCALEDAIVLARYLAHVMKMGQDQLKPKDQYKKIEASLTKYSNERRWRSIDISVTSFILGFVLQADSKLLALVRDKLFPHFLAQLLLNKSHFDCGKLDNSN 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00456 409 PANTHER FAD/NAD(P)-BINDING OXIDOREDUCTASE FAMILY PROTEIN 6 407 IPR044560 -
Pste4g00456 409 Pfam FAD binding domain 7 332 IPR002938 GO:0071949
Pste4g00456 409 Gene3D - 7 384 IPR036188 -
Pste4g00456 409 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 287 302 - -
Pste4g00456 409 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 302 318 - -
Pste4g00456 409 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 151 166 - -
Pste4g00456 409 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 - -
Pste4g00456 409 SUPERFAMILY FAD/NAD(P)-binding domain 7 391 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00456 Pste-Chr4 3458013 3460838 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00456 5 407 Miscellaneous Gene Families AT5G05320 47.044 4.59e-133 386
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g00456 4 3458013 3460838 Pste4g00456 4 3458013 3460838 ECH