Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00449 ACGACAACGAGCGCTTTCTCTTCAACGGTCCCTTTCCTCAAAACGGCTACATTCTCTCTCTACAATTCAAACTTGAAAGTTGAAAGTTCAAACTCCATTTTTCACGAAAACTCACTTTCATTGTTCTCTAAGCAGCGACGACGGAGAACCCCAACAGTAACACGGAGCGATTCGCAGATCCCTTCAGTTGTTGAGATACCAAGTGGCCTCAAAATGTCCAAACCTCAAAATGATCCCCTTTTGCAATCCGAAACAACATGTGGAACACTTCTCTATGAACTTCAGATAATATGGGACGAAGTTGGGGAGTCTGAATCTGACAGGGATAGAATGCTGTTTGAGCTTGAACAAGAGTGTCTAGAAGTATACAGAAGGAAAGTAGATCAGGCAAATCGGTCTAGAGCTCAATTAAGGCAGGCAATTGCTGATTGTGAGGCAGAACTTGCAGCCATTTGTTCTTCAATGGGAGAGAGACCAGTGCATATTCGACAGACTGATCAAAATGCTGGAAGCCTGAGGGAAGAGCACGCAAGAATTCTTCCACAATTGGAAGAGATGCAGAAAAGGAAATCTGAGCGTAGAAATGAATTTATAGAAGTTCAAGAACAGATCCAAAGCATTTCACTTGAAATATATGGCACCAGGGAGCATATTCCTGCAGTTGTAGATGAAACCGATTTATCGTTGAGAAAACTTGAAGAATTGCACAGGCAGCTGCATGCACTTCAGATTGAGAAGAGTAGTCGCTTAAAGCAAGTCCAGGAGCACCTGTATATGTTAAATTCCCTTTGTTTAGTGCTTGGTTTGGACTTTAAGCAGACAATTAATGGCATTCACCCCAGTTTAGTGGACTCAGAAGGATCTAAGAGTGTAAGTAATGACACCATTCAGAAATTAGCTGTCGCTATACAAGGACTGCGAGAAGTTAAGTTACAGAGAATGCAGAAGCTCCAAGATCTTGCAACTACAATGTTGGAGCTCTGGAACTTGATGGACACCCCTATTGAAGAGCAACAGATGTTTCAGAATGTTACATGTAATATAGCAGCTTCAGAACATGAAGTAACTGAACCAAACACCTTGTCTGTAGAATTCATCAATTTGGTTGAGACAGAAGTAGGTCGGTTAGAAGAGTTAAAATCAAGCAAGATGAAAGAGCTCGTATTAAAGAAGAGAACAGAGCTGGAGGATATTTGTCGAAAGACTCATTTGATTCCAGAAATAGATAATGCAGTGGAAAATGCTGTTGACGCCATAGAATCTGGATCTGTGGATCCTGCTTGCGTGCTTGAGCAAATTGAACTTCAGATTTCCCAAGTCAAAGAGGAAGCTTTTAGCAGAAAAGAAATACTTGAAAAGGTTGAGAAATGGCTGGCAGCCTGTGATGAAGAGTCTTGGCTTGAGGAGTACAACAGGGATGATAATCGATACAATGCTGGGAGAGGTGCTCATCTTACTCTCAAACGAGCCGAAAAAGCTCGTACCTTGGTTAACAAAATTCCAGCAATGGTGGATGCTTTGACATCAAAAACTATTGCATGGGAGAAGGAAAAAGGAACTGAGTTCACATATGATGGTATTCGTCTACTTTCTATGCTTGAAGAATACACTATATTACGTCAGGAGAAGGAGCAAGAGCGTCGTAGGCAGCGGGATCTGAAGAAACTCCAGGGACAAATGATAGCTGAACAGGAGGCACTATATGGGTCAAAACCAAGCCCTTCAAAGCCCCAAAGTGTAAAAAAGGGGCCTAGGATGTCAACCGGAGGTGCAGTCAGTAGAAGAGTATCGCTGGGAGGAGCAATGCTTCAAACTCCAAAGCCTGATTCAAAAGCTACACAATCACGTGCGATGAGAAAGACTGACAAAGCTCACCCAATTGAGCATCTAAATTACCTGGATGATGGCATTTCAGGTTTATCAGCAGCTAGAAGAGGGCTGGATATTGCTGGCGTTCCTGTAAAAAAGCACTCATTTGGTGGTGCTGGGACTCAAATCATTGAATCTCCCCTGATACGACAACCTTTTTCACCCATCTCTTCTAACAGTGTATCTTCAAAAGCTAATGTGACAAATGCTACAGATGAACTGAATATGAATAAACAGAGTGAGAAGTTGCAGAAAACACTTTCCTTTAACAATGTGCCATTTACTACTCCCTCCAAGACAGGTACTGTGATAGATGAAGAGAACAGAACTCCAAAGACAATGCCTATTCCTGTCCCTGCTACCCCTTCGACAGTATCAGTTCCAATGAATATGGCCATGACTCCTCTTCCTTCATCAATTTTGAAGAATATAAACTTGAATTCAACTCCCACATCAGTTCCTTATGGAAATGACATGGTTCAAGAGATTGAATATTCCTTTGAGGAAAAAAGGCTCAGTTATATGTTAGCATGATTTTTTCTTTGGTGTTTCATTTGTCAATTGTAGTTACATGTGATGGATAATCATAAGTCAATTGTAATTGGCTTCCTGCTTGTGTAAATTTGGAGAAGTGGAACAAATTACTAATGTGAGATTTTGCGGTCTAGTGCAATATGGTTACTTTCCGATTGTTTCATCAGAAAATGGTCTCGGTGTATTGGATGAGATTATTATCAATATTTTGAATTCAAAATATTTCATTATGAGATTTAGCAAATACTTGCCT 2656 0.4085 TTTSAFSSTVPFLKTATFSLYNSNLKVESSNSIFHENSLSLFSKQRRRRTPTVTRSDSQIPSVVEIPSGLKMSKPQNDPLLQSETTCGTLLYELQIIWDEVGESESDRDRMLFELEQECLEVYRRKVDQANRSRAQLRQAIADCEAELAAICSSMGERPVHIRQTDQNAGSLREEHARILPQLEEMQKRKSERRNEFIEVQEQIQSISLEIYGTREHIPAVVDETDLSLRKLEELHRQLHALQIEKSSRLKQVQEHLYMLNSLCLVLGLDFKQTINGIHPSLVDSEGSKSVSNDTIQKLAVAIQGLREVKLQRMQKLQDLATTMLELWNLMDTPIEEQQMFQNVTCNIAASEHEVTEPNTLSVEFINLVETEVGRLEELKSSKMKELVLKKRTELEDICRKTHLIPEIDNAVENAVDAIESGSVDPACVLEQIELQISQVKEEAFSRKEILEKVEKWLAACDEESWLEEYNRDDNRYNAGRGAHLTLKRAEKARTLVNKIPAMVDALTSKTIAWEKEKGTEFTYDGIRLLSMLEEYTILRQEKEQERRRQRDLKKLQGQMIAEQEALYGSKPSPSKPQSVKKGPRMSTGGAVSRRVSLGGAMLQTPKPDSKATQSRAMRKTDKAHPIEHLNYLDDGISGLSAARRGLDIAGVPVKKHSFGGAGTQIIESPLIRQPFSPISSNSVSSKANVTNATDELNMNKQSEKLQKTLSFNNVPFTTPSKTGTVIDEENRTPKTMPIPVPATPSTVSVPMNMAMTPLPSSILKNINLNSTPTSVPYGNDMVQEIEYSFEEKRLSYMLA 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00449 800 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 82 650 IPR007145 GO:0000226|GO:0008017
Pste4g00449 800 Coils Coil 120 147 - -
Pste4g00449 800 MobiDBLite consensus disorder prediction 564 592 - -
Pste4g00449 800 Coils Coil 529 559 - -
Pste4g00449 800 Pfam Microtubule associated protein (MAP65/ASE1 family) 89 578 - -
Pste4g00449 800 MobiDBLite consensus disorder prediction 714 744 - -
Pste4g00449 800 Coils Coil 183 203 - -
Pste4g00449 800 Gene3D - 437 570 - -
Pste4g00449 800 FunFam 65-kDa microtubule-associated protein 6 437 570 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00449 Pste-Chr4 3424393 3429697 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00449 82 615 EF-hand Containing Proteins AT5G62250 57.248 0.0 546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste9g01271 9 11148107 11153420 Pste4g00449 4 3424393 3429697 ECH
Pste4g00449 4 3424393 3429697 Pste4g00449 4 3424393 3429697 ECH
Pste9g01271 9 11148107 11153420 Pste4g00449 4 3424393 3429697 PCT