Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00397 GGCAGCAACAAGCAACAAGCAACAAAGTGAATCGAATCCGTAGAGGGGATCGATGGAGGGATTAGGAGGACTGAGGCACCTTTTTGTGACAATGTTTGTGAGTGGGTTAAGCGGAATCATAGTTGTTCCGGTAATAACTGACGTTACCATAGCTGCACTCTGCCCAACCCAACCTCAACAAGATCAGTGCTCTCTTGCCATTTACCTCTCCGGCCTCCAACAAGCTATGGCTGGAGTGGGGTCAGTGGTGATGACACCATTGATAGGAAACTTGTCCGATCGATATGGCAGGAAAGCGTTAATCACACTTCCTCTCACACTCTCTGTCATTCCTAATGTGATATTGGCATACAAAAGGGATACCCAATTCTTCTACGCCTACTATGTGGTGCAAACTCTTATTTCCATGGCAGGCGAAGGGTCGTTACACTGCCTCGCTCTTGCATATGTGGCAGACAAGGTTCCAGATGGGAAACGAACATCAACATTCGCAATACTTGCTGGTGTTGGATCAGCAGCATTCGTAGGAGGAACACTAGCTGCTCGTTTCCTATCCACTGCCTTAACATTTCAGGTTTCTGCTCTCTTGTCAATGATTGCACTGGTGTACATGAGAATTTTCCTTAAGGATAGTGTACCCAATGGTGCCATGAAACAGCCTTTATTGAAAGAGGTGGAGGATGATTCATCACCAAGGCCAACTGGAACATTTAAGACTCTGCCCTCCATTCGGGATTTGATTTGTTTGCTCAAGTGCAGTCCCACATTCTCGCAAGCAGCCATTGTTTCTTTCTTCCATAGTCTTGCTGATGGTGGCTTGATGGCTGTATTGCTGTTTTATTTAAAGGCACGTTTTCAATTCAACAAGAACCAGTTTGCTGATTTGATGATGATTAGTGGGATTGGAGCGACTCTTGCACAACTATTTTTCATGCCCATTTTAGTGCCTGTTATAGGAGAGGAGAAGCTGCTCTCCACAGGGCTCTTAGTTAGCTGCATAATTATCTGTACCTACAGCATATCATGGGCTGCATGGGTTCCTTATGCTCTAGCAGGTTGCTCTATGTTTACAGTTTTTGTGCGCCCTAGTTTATGCAGCATTGCATCAAAACAAGTGGGACCTACTGAACAGGGAATGGTTCAAGGATGTCTTTCAGCAATTAATTCCTTCGCCAACATCATTGCTCCATTAATTTTCAGTCCATTGACAGCCTTATTCCTATCAGAAGAAGCGCCGTTTTCTTTTCCCGGCTTCAGTCTAATGTGCCTTGGGTTAGCGCTGATGATAGCAGTTTTTCAGAGTCTAATGATCCGCGCTGCTCCTCCTGTTGCGGATGACAAAATTAGCAGCAACCGCTGTACAGATATTTTGGTCTAAGCAAAGTTGTTCATAGCATATCAGACGTTAATTAGAAAGATAGCAGAAGGAATTGCACTGCAAGTGTAGATTCTAAGGTCGACATATGCTTTGGCACTTGGAGATATAGAACACTAAATAGCAAAATACAAAAAAGTAGAACGTGAAGCTGGTTCTGTTCTGAAAAATAATAATCAGGTGAACCAACTGCAGCATCTCAGATTTCTTTGCAATTATGAAGAGGAAATATTGCACATATTTATGAACCATAGGGTCTCATCGACATCAGTTACTTCTTAGCCATTTAACTTAGCATTGTTAATCATTGTATGTAAACATTTCTAGCTAGTATTTTTCTCAAGTTTCCTGTGTCGTCATTAGTGAATGAATTTGTAAAATTTATATTTATGTAATGGATGGCAGAATTTTAAGTCGTGTATTTGTTGAACCCTGCAATGCAACG 1820 0.4242 MEGLGGLRHLFVTMFVSGLSGIIVVPVITDVTIAALCPTQPQQDQCSLAIYLSGLQQAMAGVGSVVMTPLIGNLSDRYGRKALITLPLTLSVIPNVILAYKRDTQFFYAYYVVQTLISMAGEGSLHCLALAYVADKVPDGKRTSTFAILAGVGSAAFVGGTLAARFLSTALTFQVSALLSMIALVYMRIFLKDSVPNGAMKQPLLKEVEDDSSPRPTGTFKTLPSIRDLICLLKCSPTFSQAAIVSFFHSLADGGLMAVLLFYLKARFQFNKNQFADLMMISGIGATLAQLFFMPILVPVIGEEKLLSTGLLVSCIIICTYSISWAAWVPYALAGCSMFTVFVRPSLCSIASKQVGPTEQGMVQGCLSAINSFANIIAPLIFSPLTALFLSEEAPFSFPGFSLMCLGLALMIAVFQSLMIRAAPPVADDKISSNRCTDILV 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00397 441 SUPERFAMILY MFS general substrate transporter 10 421 IPR036259 -
Pste4g00397 441 ProSiteProfiles Major facilitator superfamily (MFS) profile. 6 425 IPR020846 GO:0022857
Pste4g00397 441 PANTHER MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 6 413 - -
Pste4g00397 441 Gene3D MFS general substrate transporter like domains 7 420 IPR036259 -
Pste4g00397 441 PRINTS Tetracycline resistance protein signature 146 168 IPR001958 GO:0022857
Pste4g00397 441 PRINTS Tetracycline resistance protein signature 53 72 IPR001958 GO:0022857
Pste4g00397 441 PRINTS Tetracycline resistance protein signature 363 386 IPR001958 GO:0022857
Pste4g00397 441 CDD MFS_SLC46_TetA_like 10 419 - -
Pste4g00397 441 Pfam Major Facilitator Superfamily 11 379 IPR011701 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00397 Pste-Chr4 3049278 3055712 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00397 2 424 Organic Solute Cotransporters AT2G16990 46.591 2.65e-123 363
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g00397 4 3049278 3055712 Pste4g00397 4 3049278 3055712 ECH