Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00393 GAACTATTTGGGTGGATTATTAGATTGAGTTGATTTGAGGCGAGGCAAGAGCGTAATTATGCGATAGGGAAAGTGGGAATAAAAAGGAAGGGGTGGCAGTGGCAGTGGCAGTGGCAGTGGGCAGTGGCAGTGGTGTGCCACGTTAAGAGGCTAGTCCCTTACGTTTGGTGAGTTCCCATATTCCCAAACCTATCATCGTCAAGCCTCAAAGGTATCGATCGATCAATCAGTGATGTTTGTGCTTGTTTAGGGAAATTGTCTTGTTTTGTGAATGTACAGGATGAGGATGGACAAGAGGCCAATAACAGCCGTCTACAAAGCTCTTCCCGATCTCTGCAATCGAGAAATCGGCCAACTACCCTCCAGAAATTTCGCTCTTCGTCTCGCCGCCTCCGAGGATCTTGTCCTTCGACTTGATGTACTCAGGAAGCTGCAAAAGCACAGAGGTTGTGTCAACACTGTGAGCTTCAATGCTGATGGTGACATTCTCCTGTCTGGTTCTGATGACCAGAGGGTCATTCTCTGGGACTGGGAAACCGGTCGAATTAAACTCTCCTTCCATTCTGGTCATGCCAACAATGTTTTCCAGGCCAAAATCATGCCTCACTCCGATGATCGACGCATTGTTACCTGTGCTGCTGATGGACAGGTGAGACATGCTCAAATTCTTGAAAATGGAGGAGTGGAAACTAAGTTTCTGGCCAAGCATCAAGGAAGGGCTCATAAGTTGGCTATAGAGCCTGGTAGCCCTCATATATTTTATACCTGTGGTGAAGATGGGTTGGTGCAGCATTTTGATCTGAGAACTGGGGCTGCAACCGAACTTTTTACATGCCAGCCCATCAAGGATAGATGGAATTACATGCCAGTCATTCAATTAAATGCAATTGCAATTGATCCAAGGAACCCAAATCTCTTTGCAGTTGCTGGGTCTGATGAGTATACTAGACTTTATGATATTCGCAAGTATAAATGGGACGGATCAACAGATTTTGGTCAACCAACTGACTTCTTTTGCCCTCCACAATTGATTGGTGATGAGCGAGTTGGCATAACAGGCTTGGCCTTTTCTGAACAAAGAGAGCTGCTTGTGTCATACAATGATGAGTGTATTTACCTTTTTACCCAAGATATGGGTTTGGGACCAAACCCTGATCAGGGGTCCCCTAAATCTATGAACAGTGATGCAAGTGAAATTGGATTTAGTCATGGATCTGTGTCATCTCAATCCAATATGGATGCTGATGAGAAAATCACCCCACAAGTTTTTAAGGGACACAGGAATTGTGAGACAGTGAAGGGTGTTAACTTTTTCGGACCTAAATGTGATTATGTGGTTAGTGGGTCAGACTGTGGTAGGATTTTCATATGGAAAAAGAAAGGCGGTCAACTTATTCGTGTCATGGAAGCAGATAAGCATGTTGTGAACTGCATTGAGTCTCATCCTCATACAATGGTTCTTGCAAGCAGTGGTATTGAGCATGACATCAAGATATGGACCCCAAAGGCACTTGAGAAAGCTACTTTGCCCAAAAATATTGAGCAGGTTCACGTGTTTGATCATATTCATTGGTTTACAATCGGTGGTGGTTATGATGATGATGACGACGACGACGACAATGTTATGTTTGATGATGACTGTGATGTTGATACGTCTGACAATGATGATGAGGATGATGACGACAATGATGATAATGAAGAGGAAGAGGATGACAGTTGTGATGATTATATCAATGATTATGATTGTGATGATGATGACAACAATAATAAACCGAAGGCTAGGGGCTGGATGTACCGGATAGCTTCTCCTGAGGACCTGATGTTGCAACTTTTTTCACTTCCAAGACGAAGTGTTAGGACGGAAAGCAATGGAGAAAACTCAGCTACAGATCGCGACCTTCTGCAGTTGATATTGACATTCAATGCTAATAGTGACAGTTCCAACGAAGATGAAGACGATGAAGGAGATGCAGCCAGCCAAGACGACTATTTCAAGTTACATATTGGTCCTAAAAAAATGCTAGCAATTGTAAATAACATAGGATTAACAATAACTGTTGACTGGAATATTGCA 2074 0.433 MYRMRMDKRPITAVYKALPDLCNREIGQLPSRNFALRLAASEDLVLRLDVLRKLQKHRGCVNTVSFNADGDILLSGSDDQRVILWDWETGRIKLSFHSGHANNVFQAKIMPHSDDRRIVTCAADGQVRHAQILENGGVETKFLAKHQGRAHKLAIEPGSPHIFYTCGEDGLVQHFDLRTGAATELFTCQPIKDRWNYMPVIQLNAIAIDPRNPNLFAVAGSDEYTRLYDIRKYKWDGSTDFGQPTDFFCPPQLIGDERVGITGLAFSEQRELLVSYNDECIYLFTQDMGLGPNPDQGSPKSMNSDASEIGFSHGSVSSQSNMDADEKITPQVFKGHRNCETVKGVNFFGPKCDYVVSGSDCGRIFIWKKKGGQLIRVMEADKHVVNCIESHPHTMVLASSGIEHDIKIWTPKALEKATLPKNIEQVHVFDHIHWFTIGGGYDDDDDDDDNVMFDDDCDVDTSDNDDEDDDDNDDNEEEEDDSCDDYINDYDCDDDDNNNKPKARGWMYRIASPEDLMLQLFSLPRRSVRTESNGENSATDRDLLQLILTFNANSDSSNEDEDDEGDAASQDDYFKLHIGPKKMLAIVNNIGLTITVDWNIA 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00393 601 SMART WD40_4 196 229 IPR001680 GO:0005515
Pste4g00393 601 SMART WD40_4 371 410 IPR001680 GO:0005515
Pste4g00393 601 SMART WD40_4 246 285 IPR001680 GO:0005515
Pste4g00393 601 SMART WD40_4 136 176 IPR001680 GO:0005515
Pste4g00393 601 SMART WD40_4 326 368 IPR001680 GO:0005515
Pste4g00393 601 SMART WD40_4 47 86 IPR001680 GO:0005515
Pste4g00393 601 SMART WD40_4 89 131 IPR001680 GO:0005515
Pste4g00393 601 Gene3D - 41 412 IPR015943 GO:0005515
Pste4g00393 601 ProSiteProfiles Trp-Asp (WD) repeats profile. 54 95 IPR001680 GO:0005515
Pste4g00393 601 Pfam WD domain, G-beta repeat 331 368 IPR001680 GO:0005515
Pste4g00393 601 Pfam WD domain, G-beta repeat 51 86 IPR001680 GO:0005515
Pste4g00393 601 SUPERFAMILY WD40 repeat-like 46 409 IPR036322 GO:0005515
Pste4g00393 601 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 54 91 - -
Pste4g00393 601 MobiDBLite consensus disorder prediction 446 498 - -
Pste4g00393 601 PANTHER WD REPEAT DOMAIN-CONTAINING FAMILY 19 557 IPR045151 -
Pste4g00393 601 MobiDBLite consensus disorder prediction 446 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00393 Pste-Chr4 3021365 3028125 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g00393 4 3021365 3028125 Pste4g00393 4 3021365 3028125 ECH