Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03543 AAATAGAGAGCAGAGCACAAGTTCCCCACACCTCACCTCATTCCATTAAAAGTCGTCATGGCCATATCTCCAATTTTCTTGTTGGCCTTCCTTTCTCTCATTTATGGCAATGGTGGTGTTCTTCCCATTGAAGCCACCCACCATGTTTACAGAAATCTTCAGACTCTATCATCTCATTCCACTTATCAACCTTATAGAACTGCTTATCATTTTCAACCTCCCAAGAATTGGATAAATGGACCAATGAGGTACAAAGGACTTTACCATCTGTTCTATCAATATAATCCAAAAGGTGCTGTGTGGGGCCATATTGTCTGGGCCCACTCAGTATCAAAGGATCTAGTGAATTGGAGTCCATTGGATCCTGCCATTTACCCTTCTCAGCCGTCTGATATCAACGGTTGTTGGTCAGGCTCAGCCACAATGCTTCCTGGGGGCAAACCAGGCATTTTATACACAGGAATCGACCCTAACCATCACCAAGTTCAAAACTTAGCCATACCCAAAAACATGTCTGACCCATTACTTAGGGAATGGGTGAAGTCAGCAAAAAATCCGCTAATGGCACCAACTGTGGCTAACAAGATCAATTCAAGCTCATTTAGAGACCCCACCACTGCTTGGTTAGGCAAAGATGGGTACTGGAGAGTAGTGATTGGAAGCAAAGTAAACACGAGGGGTATGGCAATTTTGTACAAGAGCAAAAACTTTGTTAATTGGGTTCAAGCCAAACAACCCCTTCATTCAGCAGAAGGCACTGGGATGTGGGAATGCCCTGATTTCTATCCAGTTCTGAATAAGAGCCCATTAACTGTTGGTCTTGACACTTCTGTGAATGGTGATAATGTTAGGCATGTGCTTAAGGTTAGCTTGGATGATACAAAACATGATCATTATTTGATTGGAACTTATGACATTTCCAAGGATATCTTCACTCCGGATAACGGATTTGAGGATAGTGATCAATCCGTCTTTAGATATGACTACGGAAAATATTATGCCTCAAAAACGATTTTCGATGATGGAAAGAACAGAAGGGTCTTATTGGGTTGGGTTAACGAATCCTCAAGTGTTGCCGACGATATAAAAAAAGGATGGGCTGGAATCCATACTATTCCAAGGGCCATCTGGCTTCATAAAACGGGGAAACAGTTGGTGCAATGGCCGGTGATGGAAATTGAAAGCTTGCGTGTGAACCCTGTCCACTGGCCTGCCAAAGTGGTCAAAGGCGGTGAAATGCACCAAGTTTCTGGTATTACTGCGGCACAGGCTGACGTTGAAATATCATTTGAAGTGAATGAGTTTGGAAAGGCGGAAGTATTGGAGCATAGGGTGGATCCCCAAATTGTGTGTAGTCGAAAAGGTGCTGCTGTAAAAGGTGGTTTGGGACCCTTTGGTTTGCTAGTTTTTGCTTCTCGTGGCTTGCAAGAGTACACGGCAGTGTTCTTTAGAATATTTAGATATCAAAATAAGAATTTGGTTGTCATGTGTAGCGACCAAAGCAGGTCTTCTTTGAATAAAGCTAACGACATGACAACCTATGGGACTTTTGTGGACGTGGACCCTCTTCATGAGAAGCTATCACTAAGAACTTTGATTGATCACTCGGTAGTGGAGAGTTTTGGAGGAGAAGGAAGGGCGTGCATAACAGCCAGAGTATATCCTACAATAGCAATTAACGATAAGGCACGTCTATATGCTTTCAATAATGGAACTGCCTCTGTTAAGATCACAAGATTGAGTGCTTGGAGCATGAAGAAGGCAAAAATCAACTGAAACCAACTGGATTATCTATTTGTGTTCTTTTATTAGTGCCTACAAACACTACATCTTATTCATCTACATGTCTGTCATTCATTTGTATCAAATTCAAATTTAACCTAGATGATAGGTACTGTACGCTTGATTTAAAGTTAAAGCTGAGAGAGTCCAAATAGAAAAGAAGAAGGTGCTATTAATTAAATTAAAAAGCAATCATTTGATTGATTAGGGTTTCCCATGA 2002 0.4151 MAISPIFLLAFLSLIYGNGGVLPIEATHHVYRNLQTLSSHSTYQPYRTAYHFQPPKNWINGPMRYKGLYHLFYQYNPKGAVWGHIVWAHSVSKDLVNWSPLDPAIYPSQPSDINGCWSGSATMLPGGKPGILYTGIDPNHHQVQNLAIPKNMSDPLLREWVKSAKNPLMAPTVANKINSSSFRDPTTAWLGKDGYWRVVIGSKVNTRGMAILYKSKNFVNWVQAKQPLHSAEGTGMWECPDFYPVLNKSPLTVGLDTSVNGDNVRHVLKVSLDDTKHDHYLIGTYDISKDIFTPDNGFEDSDQSVFRYDYGKYYASKTIFDDGKNRRVLLGWVNESSSVADDIKKGWAGIHTIPRAIWLHKTGKQLVQWPVMEIESLRVNPVHWPAKVVKGGEMHQVSGITAAQADVEISFEVNEFGKAEVLEHRVDPQIVCSRKGAAVKGGLGPFGLLVFASRGLQEYTAVFFRIFRYQNKNLVVMCSDQSRSSLNKANDMTTYGTFVDVDPLHEKLSLRTLIDHSVVESFGGEGRACITARVYPTIAINDKARLYAFNNGTASVKITRLSAWSMKKAKIN 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03543 572 Pfam Glycosyl hydrolases family 32 C terminal 373 565 IPR013189 -
Pste3g03543 572 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 382 566 - -
Pste3g03543 572 Gene3D Glycosyl hydrolase domain; family 43 55 380 IPR023296 -
Pste3g03543 572 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 38 571 - -
Pste3g03543 572 SMART glyco_32 51 526 IPR001362 GO:0004553|GO:0005975
Pste3g03543 572 Pfam Glycosyl hydrolases family 32 N-terminal domain 51 370 IPR013148 -
Pste3g03543 572 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 55 382 - -
Pste3g03543 572 SUPERFAMILY Arabinanase/levansucrase/invertase 43 371 IPR023296 -
Pste3g03543 572 CDD GH32_Fruct1-like 57 359 - -
Pste3g03543 572 Gene3D - 381 566 - -
Pste3g03543 572 SUPERFAMILY Concanavalin A-like lectins/glucanases 370 568 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03543 Pste-Chr3 27801129 27804165 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03543 63 572 Glycoside Hydrolase AT3G13790 62.934 0.0 671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03543 3 27801129 27804165 Pste6g01044 6 4264435 4268401 PCT