Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03512 AAGAATCAAGAAATTGAAGGGAAAAAGGCAAGGTTGGGTTGAGAAAGAAAGGATGAAGTGAGGGAGGGAGGAATAATCATTCTCTCACTTTCTTTCTCCAATCCCAATTCCAATTCCAATTCTCCATACACTTTCGAACCCTAACCAATTTCCATGGCTTCCTCGGAGATCGAGGTGGTATCATCATCGGTCTCCAAACCCAACGACCAGCCTCCAATCCTCGACGTATTCACTGCCTCTGCCCACGGCGACTTCAACAAATTGCGAACCTTCGTCGAACAAAACGGTGCCGCTGTTTCTGTTCCCGACGCTCATGGCTATTACGCTCTTCAATGGGCATCGCTTAACAATTTCCACGACATTGCGCACTATCTCATTCAGCATGGGGCGGATGTCAATGCTAAAGACAACATGCAACAAACAGCATTGCATTGGGCTGCGGTTCGCGGTTCGATTGCAGCTGCTGATGTACTCTTGGAGAATGGTGCTCGGGTTGAAGCTGCAGACGTAAATGGATACAGGGCAGTTCATGTTTCTGCACAATATGGACAGACAACTTTCTTAAATCACATTGTAGTAAAGTACCATGCTGATTTTGATGTGCCTGATAACGATGGAAGGAGTCCTCTTCATTGGGCTGCATATAAGGGATTTGCTGACACAATACGATTGCTTTTATTTAGAGATGCAAGTCAAGGAAGACAAGATAAGGACGGTTGTACACCATTGCACTGGGCTGCATTAAGAGGAAATGCAGAGGCATGCGCTGTACTTGTACATGCAGGCACAAAGAAAGAATTGATGGTGAAGGACAATGCTGGACACACACCTGTACAGCTTGCATATGATAAAGGTCATCGGCATGTCGCTCCTTTCCTTGTACGTAATGTTGTATTGCTTAGGCTGTTGTCAAATCAACTACGGGCTCATAGCAATCATTGGAGAAGGAAACTTTGTAGTGGGGTGATGACAGATGTTGGTTATGCTCCCATCTTATTGTGTGTTATAGTCTTTCTCATGATCCTCTTCATCAACTCAGTCGTTGCAGCTCCGAACCTTAAAAAGATCACTGCTTTTGTTGGAATTTGGGCATGGATGGCACTTTCTCTGGCAGTTGCTGCCTTGATTATGTTCTATAGGTGTAGTAGTAAAGATCCAGGTTATATAAAACGACCAGGGGACGTGGATTCTCAAAGTGATACAGAGGTATGCAAAAAGCAGACATGTGAACGTGGTGTTTTTCTTCAACTTTCTTCCTGCTCGTCTTCTTCAAGTTTGTGCTGCTCGTCCTCCAGGGTCAAGACCGTGGCTCCATGGTGGTTGGTGATAGTGTCTTCGCTTGGCGGTGGCTTGACGGTGCAGATTCTCTATCTGCAACTCGGTGGCGGACGATGGTTTTATGTGATGAGATGGCTCTGCGATGCTTCCTCTTCAAGTTTCGCGCTGTGTCATTTAGACGTGTCCATCGAGGTCCACTGTGTCATTTGGACGTATCTGGAGGCTGGGCCTTATTTGGCCCAGCCCAAAGATCCTTTATCGAATATTGATCTGAATAGTTCCTCCGTATGGATGGGAAATTGGTCTCAACTTTGCCCTACCTGCAAGATAATAAGACCTGTCCGATCTAAGCATTGCCCTACATGTAAGCGATGTGTGTTACAGTTCGACCACCATTGTCCATGGATATCTAACTGCGTTGGGAAGAGGAACAAAAGGGATTTCTTTATTTTTATCTGCCTAGGAACTTTGACTTCCTCCGTTTCTGCTGCCATTGCTGTTCAAAGAATTTGGACATCTACTCCAGCATTATTGGCAGGAGAAACATGGATCCATTATGTGTTAGTAAGACATCCAGGTTTAGTTGTGTTTTTGGTGATGGACACTGTTGTTTTCATTGCGGCTACAACATTAACGATAACACAGTCTTCCATGGGAAAACCTCCCCTGATTACAGCACTGCAGAAGTTCAAGGATCTGCTCCTCGCAATACTCAAAGGCCCCATTTCTCTCACAAATGACAAGATATCTCTCTTAACCCCTTTTCTCATTTATAGGCAACATACATTGTTTCTCTAA 2076 0.4489 MASSEIEVVSSSVSKPNDQPPILDVFTASAHGDFNKLRTFVEQNGAAVSVPDAHGYYALQWASLNNFHDIAHYLIQHGADVNAKDNMQQTALHWAAVRGSIAAADVLLENGARVEAADVNGYRAVHVSAQYGQTTFLNHIVVKYHADFDVPDNDGRSPLHWAAYKGFADTIRLLLFRDASQGRQDKDGCTPLHWAALRGNAEACAVLVHAGTKKELMVKDNAGHTPVQLAYDKGHRHVAPFLVRNVVLLRLLSNQLRAHSNHWRRKLCSGVMTDVGYAPILLCVIVFLMILFINSVVAAPNLKKITAFVGIWAWMALSLAVAALIMFYRCSSKDPGYIKRPGDVDSQSDTEVCKKQTCERGVFLQLSSCSSSSSLCCSSSRVKTVAPWWLVIVSSLGGGLTVQILYLQLGGGRWFYVMRWLCDASSSSFALCHLDVSIEVHCVIWTYLEAGPYLAQPKDPLSNIDLNSSSVWMGNWSQLCPTCKIIRPVRSKHCPTCKRCVLQFDHHCPWISNCVGKRNKRDFFIFICLGTLTSSVSAAIAVQRIWTSTPALLAGETWIHYVLVRHPGLVVFLVMDTVVFIAATTLTITQSSMGKPPLITALQKFKDLLLAILKGPISLTNDKISLLTPFLIYRQHTLFL 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03512 640 ProSiteProfiles Ankyrin repeat region circular profile. 54 86 - -
Pste3g03512 640 FunFam S-acyltransferase 141 247 - -
Pste3g03512 640 Gene3D - 140 283 IPR036770 -
Pste3g03512 640 Gene3D - 5 139 IPR036770 -
Pste3g03512 640 SMART ANK_2a 222 251 IPR002110 GO:0005515
Pste3g03512 640 SMART ANK_2a 54 83 IPR002110 GO:0005515
Pste3g03512 640 SMART ANK_2a 120 150 IPR002110 GO:0005515
Pste3g03512 640 SMART ANK_2a 154 183 IPR002110 GO:0005515
Pste3g03512 640 SMART ANK_2a 87 116 IPR002110 GO:0005515
Pste3g03512 640 SMART ANK_2a 187 216 IPR002110 GO:0005515
Pste3g03512 640 Pfam Ankyrin repeats (3 copies) 118 182 IPR002110 GO:0005515
Pste3g03512 640 Pfam Ankyrin repeats (3 copies) 185 243 IPR002110 GO:0005515
Pste3g03512 640 Pfam Ankyrin repeats (3 copies) 28 117 IPR002110 GO:0005515
Pste3g03512 640 ProSiteProfiles Ankyrin repeat profile. 54 86 IPR002110 GO:0005515
Pste3g03512 640 ProSiteProfiles Ankyrin repeat profile. 154 186 IPR002110 GO:0005515
Pste3g03512 640 ProSiteProfiles Ankyrin repeat region circular profile. 87 118 - -
Pste3g03512 640 Pfam DHHC palmitoyltransferase 478 590 IPR001594 GO:0016409
Pste3g03512 640 ProSiteProfiles Ankyrin repeat profile. 87 119 IPR002110 GO:0005515
Pste3g03512 640 ProSiteProfiles Ankyrin repeat region circular profile. 187 211 - -
Pste3g03512 640 FunFam S-acyltransferase 10 140 - -
Pste3g03512 640 ProSiteProfiles Ankyrin repeat region circular profile. 154 180 - -
Pste3g03512 640 SUPERFAMILY Ankyrin repeat 26 243 IPR036770 -
Pste3g03512 640 ProSiteProfiles Ankyrin repeat profile. 187 219 IPR002110 GO:0005515
Pste3g03512 640 ProSiteProfiles DHHC domain profile. 478 528 - -
Pste3g03512 640 PANTHER ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED 13 601 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03512 Pste-Chr3 27645981 27657448 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03512 41 243 Miscellaneous Gene Families AT1G05640 28.230 1.42e-11 65.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03512 3 27645981 27657448 Pste3g03512 3 27645981 27657448 ECH