Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03389 AAAATCCAGTCCTCCGTGTTCATGTTGATTACAGTAATCCCTCAATGTTGAATGTTTATGTTGATGGGAAGCTCTTCGATTCGCATTTCAACGCCATCAATTTTCGCTCAAACCCTTTGTTCAACTCCAATGGCTTCCTCTCTCAGTTTCTCCACTCCTCCTCCTCTCTATCGCCCCAGCATTTCAAATTCTTCACTGGGTTGCACACGTTTTCGTTCAATGGACATGGGTCGGATATGGTTGTTGATCAACTCAATTCTAAGGTCCCCAATGCTGTTAGTAGAATTCGAGCTACATTGACCTCTGGAGGAGGAGATTTCAGATGTTATCCAAACGGCTCTGATTTTGTGACAAATCGTGTGGGAACTAAGGCTCGGTGTGGTGTTGTGGCGTTTGGAACACTGGGAGCAGACACGGCAGTGCCAGCAGGCAGTGGTTTTTCTGATGAAGATGATGAGTATGATTTTGACAGTCCAACAGAAGGTTTTGCTTCCATATCAGAAGCCGTTGAAGACGTCAGGAATGGAAAGATGGTAGTGGTTGTAGATGACGAGGATAGGGAAAATGAAGGAGACTTGATAATGGCAGCAGAGTTGGCTACACCTGAGGCTATGGCTTTTATTGTGAAACATGGAACTGGAATACATGAAAGAAAAGATTTGGAAAGATTGGAGCTTCCTTTGATGGTAAACAGTCAGTACAATGATGAGAAACTTCGCACCGCATTCACTGTGACAGTGGATGCTAAACATGGTACTACCACAGGGGTTTCAGCTCATGATAGGGCAACAACAGTCTTGGCCCTTGCATCCAAAGATTCAACACCAAGTGATTTCAACCGCCCAGGCCATATTTTCCCTCTAAAATACAGGGAGGGTGGTGTGCTGAAGAGAGCTGGACATACAGAAGCTTCAGTTGATCTTGCCGTACTTGCTGGTTTGAATCCTGTGGCAGTTCTATGTGAGATTGTGGATGATGATGGTTCCATGGCTAGATTACCGAAGCTTCGCCAGTTTGCAGAGCGTGAAAATTTAAAAATTGTATCCATTGCTGACTTAATAAGGTATAGACGGAAGAGAGATAAACTTGTTGAGCGTGCTGGTGCTGCAATAATACCAACAATGTGGGGCCATTTGCAGCTAATTGCTATAGATGGGATTGAGCATATTGCAATGGTTAAGGGTGACATTGGGGATGGAGATGATGTACTTGTGAGAGTACACTCAGAATGTCTGACAGGAGACATATTTGGATCTGCCAGATGCGACTGTGGAAATCAGCTTGCTCTTGCAATGCAACAGATTGAGGAGGCTGGGAGAGGCATATTGATATATCTTCGAGGGCATGAAGGCAGGGGTATTGGGTTGGGCCACAAACTTCATGCCTATAACCTACAGGATGCTGGACGGGATACTGTAGAAGCCAATGAGGAATTGGGATTGCCTGTTGACTCCAGGGAGTATGGAATTGGTGCACAGATTTTGAGGGACTTGGGTGTTCGTTCTATGAAGCTAATGACAAACAATCCAGCAAAATATGTTGGGCTCAAAGGCTATGGTTTGACTATTTCCGGCAGGATCCCGTTATTATCACTTATCACAAAAGAGAACAAGCGATACTTGGAGACCAAACGTGTGAAAATGGGTCACGTATATGGCATGGAATTCAACAGCAAATTGAACTTTATAGACGGTGCCAATGGTAAAGCCAGTAGTGATGATGATTCTAATGCTGCTTCTGGCTTATAAACTTGCTTTTTTCTGCCAGAAACACAATTTTATGTCACAAACAGCAAAGAGGAAGTGTAGATATCCGTCTGCAGATGGATTTAAAAAGAGAATCATGGTTCTACAAGTGATTTAATTTTTCTATTTCATTTGCCTATTTTTTTTCTGGCAGGCTCTATAAATTAGGCTTCCTCAAACATTTATCACTCCGAAACTTTATCAACTGCCATGTAATGGATATCATAGATGATAGATAAGATCATTGCTTAGAAAAATATAAGGTTGACTGGCTTTCTTTTGTGTTATGATATATAAAGGTGCGTTCATTTGTATAATTTCACTTTACACAAAAGTGGGTGCTTTTGTAGAGGTTCACTATATGAAGGTACAATTTCTA 2124 0.4228 MLNVYVDGKLFDSHFNAINFRSNPLFNSNGFLSQFLHSSSSLSPQHFKFFTGLHTFSFNGHGSDMVVDQLNSKVPNAVSRIRATLTSGGGDFRCYPNGSDFVTNRVGTKARCGVVAFGTLGADTAVPAGSGFSDEDDEYDFDSPTEGFASISEAVEDVRNGKMVVVVDDEDRENEGDLIMAAELATPEAMAFIVKHGTGIHERKDLERLELPLMVNSQYNDEKLRTAFTVTVDAKHGTTTGVSAHDRATTVLALASKDSTPSDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGLNPVAVLCEIVDDDGSMARLPKLRQFAERENLKIVSIADLIRYRRKRDKLVERAGAAIIPTMWGHLQLIAIDGIEHIAMVKGDIGDGDDVLVRVHSECLTGDIFGSARCDCGNQLALAMQQIEEAGRGILIYLRGHEGRGIGLGHKLHAYNLQDAGRDTVEANEELGLPVDSREYGIGAQILRDLGVRSMKLMTNNPAKYVGLKGYGLTISGRIPLLSLITKENKRYLETKRVKMGHVYGMEFNSKLNFIDGANGKASSDDDSNAASGL 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03389 567 Gene3D DHBP synthase 139 348 - -
Pste3g03389 567 Pfam GTP cyclohydrolase II 355 513 IPR032677 -
Pste3g03389 567 PANTHER GTP CYCLOHYDROLASE II-RELATED 146 538 - -
Pste3g03389 567 SUPERFAMILY YrdC/RibB 147 345 IPR017945 -
Pste3g03389 567 Gene3D GTP cyclohydrolase II 349 515 IPR036144 -
Pste3g03389 567 SUPERFAMILY RibA-like 347 514 IPR036144 -
Pste3g03389 567 FunFam Riboflavin biosynthesis protein RibBA 349 516 - -
Pste3g03389 567 FunFam Bifunctional riboflavin biosynthesis protein RIBA 1 chloroplastic 139 348 - -
Pste3g03389 567 NCBIfam 3,4-dihydroxy-2-butanone-4-phosphate synthase 149 342 IPR000422 GO:0008686|GO:0009231
Pste3g03389 567 Hamap GTP cyclohydrolase-2 [ribA]. 347 539 IPR000926 GO:0003935|GO:0009231
Pste3g03389 567 CDD GTP_cyclohydro2 348 535 IPR000926 GO:0003935|GO:0009231
Pste3g03389 567 Pfam 3,4-dihydroxy-2-butanone 4-phosphate synthase 153 341 IPR000422 GO:0008686|GO:0009231
Pste3g03389 567 Hamap Riboflavin biosynthesis protein RibBA [ribBA]. 147 535 IPR016299 GO:0009231
Pste3g03389 567 NCBIfam GTP cyclohydrolase II 354 536 IPR000926 GO:0003935|GO:0009231
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03389 Pste-Chr3 26674600 26679792 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03389 3 26674600 26679792 Pste3g03389 3 26674600 26679792 ECH