Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03183 TCTATTGGAGGTTCTGGAAGAGTTATAGGAAATTATTTGGAAGACATACTACGACCAAGATTTGGTTCAGATTCGTATGAACGGGTTGATAAAAGTCTTCAGCCTTCCAAGAAGCAAGCTGCCATGAAGAAATTTAATGATAAGAACAATGGACGATTTGTGTTTTTGTTGGAAACGTGTGCTTGCCTTCCAAGCATTAAATTGTCTTCTGTTGATTCTATTATTATATTTGATAGTGACTGGAACCCAATGAATGATATAAGAGCTCTTCAGAAAATAACACTTGATTCGCAATTTGAATTGATAAAAATATTTCGTTTATATTCATCTTTTACCGTTGAAGAAAAAGCCTTAATCCTTGCTAAGCAATGTAAGATACTTGACATCAATTCACAAAGCATAAACTGGAGTACCAATCATATGCTGCTGATGTGGGGTGCTTCTTGTCTATTTGACGAATTGAAAGTTTTTCACGATGATGAAGCTTCTGCATCAAATGTGAAATCCTTATTTGGACGACCACTTCTGAATGAAGCAATGCATGAATTCTCATTCCTTCTATCTCAGGATGGGGAACATATCCATTCTAGCAACTGTTCTACTTTGTTAAAAGTACAGCAAATTGGGGCAACATACCAAGCAAATTTTCCTTTGCTTGGTGAGCTAAAATTTAGGGAACTGGCTGAAGAGCCACCCCAATTTTTTTGGACAAAACTTTTGGAGGGAAAACAGTTTCAGTGGAAGTACTTAAATAGTTCATCTCAGCGGAGCCGGAAGAAAGTTCATCATTTTGATGTTTCAGTCAATGAGCCAGATCTTGTAAGTGAAGGAGCAGGAAAGAAGCGCAGGAAAGTTAACAATATTGTTGATCAGCCTTCTTCAAAATCTGAAGATGAAAAATTGTCCACTGGAATTAAGGCTGGAACATCAGGAGATTTAGTGGATAGATCTCATGGAAATAATGTATCTGAGCCAAAAAGTAGACAGCATAGTGAGCAGAGGAGCTTGCATCATTTGCTGAAGCCAGAGATCAGAAAGCTTTGTGATGTTCTTCTTTATCCAGATAATGTCAAAAGCATGACTGATAATTTTCTTGAATATGTTGTGAAGAATCACCATTTCAATAGGAAACCACCGCCAATATTACAGGCTTTTCAAATATCTCTGTGTTGGACTGCAGCTTCTTTGCTAAAGCACAAATTTGATCCCAAGGAGTCTCTTATGCGTGCACAAAAAGATTTGAACTTCCGGTGTAAGAAAGAAGAGGTGTACTACATTTATTCTCAGTTGCGTTGTCTGAAGAAATTATTTTTATATCGTACAGGAAATTATAATGATACCAGTTCTCCAAAAGCTTCTGTCCCATCAAACAGGGCATATTCCTGTACAGAAGCAGAACGGGAGGTTGAATTGTTTAAAAAAGATATGTCCAAAAGTATTAAAGAAATTCAGAAGAAGGGCAACAAGAAGCTGAAGAAACTACATCTTTTGCAAGAGGAAGAGAAGCAAAGTTTTAGAGCAGCTATTGGGGAAGAAAAGGCTAAATTTGAGGGAAGGTACAAAATAAAGTCAGCTGTTATCCGATCCTGCTCTCCCAATGATGTCACGAGAATGGAAGATCTCAGGGTTTTGAATATTGAATATGAAAAAGGAATTAAAGAACTGAAATGTCAGCATGATATGTATCTCAAGGAGCTTGAGGACAAGCAATTAGCTGATATACAGGAGTTTCAAGAAAGGGAGGCTGCTTTGGTAGAAGATGTGAAATCTTGGGCCCAAAAAGAACTGTTAAAAATACTTGCTTCAAGGGAACCTGAGACGGGGGTTGAATCCTTGCAGACTTGTGATCAAGTACTGACTCACAATGGTACAAAAAATCATTTTACAGGAGGACAGGGTCATGATGATAGAGTTCAAGTTATGGCAGAGACCATCACTGAGAACTCACCTGTATCTGGTAAAAGAATTGCTCACAGGACCACAGTAAGTTTGCTAGATAGAGAGGAACTTTTGGGACTGCATGGGAATGGATTTTCAGATAGAGAATTAAGACCGAGTAGTGGTCCAGATGACAAAACCCTTTTGAGTCTACAGAACCAAAATTCTGATGGAGTCCCATCAGGCATACTTGATGGACATATTCCTGCTGAAATGCAAGAAACTAGTAATGAAGTAGACACTATCTGTGTATTAAAAAGTGAGGAACCTGTGGAAACACCTGGAATTGTCAATATTACTGATTGTCCACAGAGTGCATCTTCTCTGAATCCCCCATGTATGGATCAAATATCTGATAGAGATGGTCCAGTTACAATTTCCATTTCCAATCCACTTATGGAGCAAGAAACTACCGATGGAGTCCCCTTGAGTATTTCAGCAGCTTCTGTTTGCCATGATGGTATAGAACATTTAACTAACGCTGTGATGGTAGATAAAAGGACCGTATCAGCTCAGCAGGAAGGAGCACTTAAAACCATGACAGAGTTGTCCCAGGAGACTCCAGTATCTAGAACAGTTGGTGTCACGGTTCCCCCAGAACAAGTGCAGCAATTATCTATAGAGTCCTCTCCTGGCAATGATACATTTGGGGAAATGCAGCATTCCTCCAACCAACCTGAACTGGTATCTAGTGCAGTTGATGTTGTACCAGCAGATCAATCCAAACATGTTTCCCAGACAGTAAAGCCTTTAGAGCAGGTGCAACAATTACCATCTGCAGAGCCAGAGCTCCCTTCTTCCCATCTGGATTCAACCAATTTTCCTTTGGCAACTGAAGTTGAACATCAGCCAACTGTGGTTCCAAATCAAGACATGTTAGAACTTGATTCACATTCACACGAAGTTGTGCACCCTACCTCAAATTCAAACCCCAATACTGTTACACCTAATGAAGTAAGAATGCAGTCTTCAGATACAATAAATTTGGCAACTCCTTTGGAGATCAGTTATCAGCAAATGCAAGCTGAAACCCACACAATTTCCAGAATGCATTTGAGCTATGATCCACTAAAAAATGAATTGGATAGAATACAAAAAGTAACAGAACAAACAATGAAAAACTATGAAGATAAGAAATTGCTGTTGAAAACTGATTTTGAAAAGGAATTAGAGGAACTCCGCAGGAAGTATGATGTTAAATTTCAACGAATTGAAGTTGAATTTGAACAAAGGAAGACGACTCTGGATACAAATCTTAATGTAGTTCATGTGAATAAGTTCTTGGCAGATGCTTTTAGGTCTAAATGCTCGACTCTTAAACCATCTTCTACATCAGGAATGCCGCAAGATTCAAGTTTTGCACAGCAGCAGTTGCTGCAGTCTTCAAGACAACAAAGTGCTAGTTGGTCCTCCCTGCTTGCTGGTTCCTCTGCTGGTGTGCCTTCTGGGACCAGTCTGCGGAGTCCCTCCACAACGGCTATACGGGCAGGTTACAGTCCATCAGGATTTCCCACCAATATTTCTGCGACATCACCAATTATCAACACCATCTCTTTGCCAGTAGCAAATCTTCAAACTGGAGGGCAGATACGCGCCCCTGCACCACATCTCCGGCCCTATAGACCATGA 3567 0.3975 SIGGSGRVIGNYLEDILRPRFGSDSYERVDKSLQPSKKQAAMKKFNDKNNGRFVFLLETCACLPSIKLSSVDSIIIFDSDWNPMNDIRALQKITLDSQFELIKIFRLYSSFTVEEKALILAKQCKILDINSQSINWSTNHMLLMWGASCLFDELKVFHDDEASASNVKSLFGRPLLNEAMHEFSFLLSQDGEHIHSSNCSTLLKVQQIGATYQANFPLLGELKFRELAEEPPQFFWTKLLEGKQFQWKYLNSSSQRSRKKVHHFDVSVNEPDLVSEGAGKKRRKVNNIVDQPSSKSEDEKLSTGIKAGTSGDLVDRSHGNNVSEPKSRQHSEQRSLHHLLKPEIRKLCDVLLYPDNVKSMTDNFLEYVVKNHHFNRKPPPILQAFQISLCWTAASLLKHKFDPKESLMRAQKDLNFRCKKEEVYYIYSQLRCLKKLFLYRTGNYNDTSSPKASVPSNRAYSCTEAEREVELFKKDMSKSIKEIQKKGNKKLKKLHLLQEEEKQSFRAAIGEEKAKFEGRYKIKSAVIRSCSPNDVTRMEDLRVLNIEYEKGIKELKCQHDMYLKELEDKQLADIQEFQEREAALVEDVKSWAQKELLKILASREPETGVESLQTCDQVLTHNGTKNHFTGGQGHDDRVQVMAETITENSPVSGKRIAHRTTVSLLDREELLGLHGNGFSDRELRPSSGPDDKTLLSLQNQNSDGVPSGILDGHIPAEMQETSNEVDTICVLKSEEPVETPGIVNITDCPQSASSLNPPCMDQISDRDGPVTISISNPLMEQETTDGVPLSISAASVCHDGIEHLTNAVMVDKRTVSAQQEGALKTMTELSQETPVSRTVGVTVPPEQVQQLSIESSPGNDTFGEMQHSSNQPELVSSAVDVVPADQSKHVSQTVKPLEQVQQLPSAEPELPSSHLDSTNFPLATEVEHQPTVVPNQDMLELDSHSHEVVHPTSNSNPNTVTPNEVRMQSSDTINLATPLEISYQQMQAETHTISRMHLSYDPLKNELDRIQKVTEQTMKNYEDKKLLLKTDFEKELEELRRKYDVKFQRIEVEFEQRKTTLDTNLNVVHVNKFLADAFRSKCSTLKPSSTSGMPQDSSFAQQQLLQSSRQQSASWSSLLAGSSAGVPSGTSLRSPSTTAIRAGYSPSGFPTNISATSPIINTISLPVANLQTGGQIRAPAPHLRPYRP 1188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03183 1188 MobiDBLite consensus disorder prediction 275 336 - -
Pste3g03183 1188 Gene3D - 10 127 IPR027417 -
Pste3g03183 1188 MobiDBLite consensus disorder prediction 691 706 - -
Pste3g03183 1188 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1 142 IPR001650 -
Pste3g03183 1188 MobiDBLite consensus disorder prediction 275 302 - -
Pste3g03183 1188 Coils Coil 1004 1024 - -
Pste3g03183 1188 PANTHER HELICASE PROTEIN MOM1 267 1188 IPR039322 GO:0031507
Pste3g03183 1188 MobiDBLite consensus disorder prediction 675 706 - -
Pste3g03183 1188 MobiDBLite consensus disorder prediction 886 918 - -
Pste3g03183 1188 Gene3D - 1000 1081 - -
Pste3g03183 1188 MobiDBLite consensus disorder prediction 1084 1104 - -
Pste3g03183 1188 Coils Coil 1029 1049 - -
Pste3g03183 1188 MobiDBLite consensus disorder prediction 319 336 - -
Pste3g03183 1188 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 127 IPR027417 -
Pste3g03183 1188 MobiDBLite consensus disorder prediction 853 873 - -
Pste3g03183 1188 Coils Coil 538 572 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03183 Pste-Chr3 24572125 24581692 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03183 3 24572125 24581692 Pste3g03183 3 24572125 24581692 ECH
Pste3g03183 3 24572125 24581692 Pste1g02674 1 10490271 10507595 PCT