Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02871 ATGGACAATCTCTGTGTCATGGGGTTATGTGCAGAGGTGTTCCAAAGGCATATGTCTTTGCCGGATGTTGTCAGAGTCCCAAAAACATTGAAGCACTGGATCAGTGGAACAGCTTTGGCAGATCTATTTACTTTTAACACGAGAGAGCTTCACCCTGACCCATGTAGAAGGCCCACCATATTCTATTTGGACAAATTGTCCCGTGCTAAGGATGGCACAATAATTAGCAGTTATAAGAAATCTATCCAAAATTGCTCATCCAACGAGGCACCGGAACTTATCAGATTGGTGGCTCAACGAAGGCACTGCTGTGATATATTGGCCTCTACCGTTCCTCACCTGATGGAGATTGCAATAAGGGAATGTGCAGAGGATGAATTGATTCGCATGCAATGA 396 0.4444 MDNLCVMGLCAEVFQRHMSLPDVVRVPKTLKHWISGTALADLFTFNTRELHPDPCRRPTIFYLDKLSRAKDGTIISSYKKSIQNCSSNEAPELIRLVAQRRHCCDILASTVPHLMEIAIRECAEDELIRMQ 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02871 131 Pfam Protein of unknown function, DUF604 7 90 IPR006740 -
Pste3g02871 131 PANTHER FRINGE-RELATED 7 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02871 Pste-Chr3 21486369 21486903 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02871 8 86 Glycosyltransferase AT1G05280 43.750 3.49e-19 80.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g03154 1 14257564 14264427 Pste3g02871 3 21486369 21486903 PCT