Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02692 ATCTTAATCTTTCTAAGCCTTATTTTTAACTTTTTCTCCTCCATAGATAACTCTTAAGTGCGTGGCCTCCCTCACAAATCCTATCTGGTGGCCATTTTCCTTTTGTCATCTAACATGGTGCCACAACAGTTTACAGTTGGTGCTATATTACTGTATTTCTCTTCCCTTTAGTGTTTTGCTTTTGCTAGTTGCTACCACTTCAGCCAGAACACTGTTTAAATTCAACTTTTGTTTCCTTGTACTTCACTGTTTACAAGGTTAATTCATCGCACCCTCGGTATCACTTCCTAGAATTCTCAGTTTTCAACTACTTTTAGTCCAAGAGAATAAGCATTTATTCTTTATTCTGTTGGTGATGTGCTTTCACTTTTTGCTTTTATGAGGGGTCTGAAAGGCCTCTTTACACTGCTGCTTGCTTGCAACTAAAATTGAACAAAGTGGTGGTGACTAGTGAGTGTCCTTTGTGGTAAAAGGGTAATCTCTGGTTTACTAGTACTACTGCTACTATGCCTCCTTCTCACTTCCCACTTCGTTGGGAGAGCACAGGAGACAAATGGTGGTATGCATCTCCCATTGATTATGCTGCTGCTAATGGCCTCTATGATCTGGTCACTGAGCTTCTCCACCTTGACTCCAACCTCCTCATCAAGCTCACTTCACTTTGCCGAATCCGCCGCCTTGAGACCGTGTGGGATGATGAGTCTAAGTTTGAGGATGTTGCCAAGTGTCGGTCCAAGGTAGCAAGGAATCTTATGCTTGAGTGTGAGAGAGGAAGAGGGCACAACTCTCTCCTCCGTGCAGGCTATGGTGGATGGCTTCTCTACACTGCTGCTTCGGCTGGGGATGTGGACTTTGTTCTTGAGTTGTTGGGGAGAGACCCTTTGTTGGTCTTTGGTGAGGGAGAGTATGGTGTCACTGACATGCTGTATGCTGCAGCCAGGGGCAAGAACTGTGAGGTCTTTAACCTCTTGCTTCATTCTGCTCTTTCAAGAAAGGAGTGCCTTGCTGGCAGTGAAGCAGAATTGGAAGAGAAGTTGGATGAGGGTTCTAAGGTTTTCAAGAGGGATGTGATGAATAGGGCCCTTCATGCTGCTGCCAGAGGAGGGAATTGGGAACTGCTGAAGCAGCTTCTAGGAAGTGTTTCTGTCTCTCAAATTGTGTCTTGTAGAGATGCTCAAGGATATACTATCTTGCATACAGCAGCTGCTTGGGGCCAGATTGAGGTGGTGAGAAATCTAATTGTATCCTATGATATCATCAACTCAGATAATGCTCAAGGCAATACAGCGTTACATGTGGCTTCTTACAGAGGTTACTTACCTGTGGTAGAGATTCTGATTGAAGCATCTCCTTCATTAACAACATTAACCAATCATTACGGAGATACTTTTCTTCACATGGCAGTGGTTGGATTCAGAAGCCCTGGATTTTGTAGATTGGACAAGCATACTGAGCTCATGAAGCAACTGACAAGTGAAAAGATTGTGAACATGAAGAACATCATCAATGTCAAGAACAATGATGGAAGAACAGCTCTTCATATTGCTGTCATTCATAACATCCAATGTGATGTAGTGGAATTACTGATGTCTGTTCCATCAATTGATTTGAACATTCGTGATGCTGATGGGATGACCCCTTTGGATCATCTTAGGCAAAGATCACGATCAGCATCTTCTGATGTTTTAATCAAGAGGTTAATTTCTGCTGGAGGGATCTCAAACTATAAGGACTATATTACAAGAAATGCCCTTGTTAATCATCTTAGGACTCATGGTATTGGAGCCAGTCCTGGAACATCGTTTAGAATACCAGATTCTGAGATATTGTTGTACACAGGCATAGAGAATTCATGGGATGCCAATTATGATCAGGCTAGTGTAGAATCAAATTCATGGTCAAGTGAAATAAACAATTATGACTCAGCCAATTCCCCATGTAACAGCAAGTCTAGTTCTGTCAATTATGGTGCAAGGCGCTTAAAGTTTCTGCTCCAGTGTACTAGGAAAAGAGACACAAAAGAAGCTGCCTCGGAATTGGAAGATGATGTATCTGTGAATTCTCTCAGTTCAAGGAACAACTTGGAAGACTTTCCAACCCCATTGAGGCAAAGATACTCAAAAATGTGTTCTCTTCCAAACAACAAAAGAACACTATCTATAAGGAATTATCTTCCAAGTCCATCAGCTAAAAAATATTTTCATGATGGCCTAATGCAAGGCGTGATAAAGGTAAAGCCACAAGTGCCTCTAGCTGTTCATTCAACTTCTAGTCTATTTCAAGAACTATCTATCTCTTCTAATAGTATGCAAAAACGTGTGGATACAATGGGACCCTCTTGCTCCAATCGACCAATGGATGGTGGTGGTTCTCTGCAATTGAACTATAAGCAGGGCTCTTTCGAGAAGAAATTGATGAACCGATATTTTTCCTTTGGAGCTCATGGCCAGGCTTTAGAAGATGCAAATAGCTGCACAATGTCAAATCGAAGTTCTAAGCATTTTAGTTCTTTAGTTGCGTGAATGTTAAATAGGAAATTTGAAAAAGTTTGTGCTGATCACGTTCTTGTGAAATATGCGACAATAGTAGTTAATAATACTAATAATAATATATGCTCAATGTTCAG 2626 0.4132 MPPSHFPLRWESTGDKWWYASPIDYAAANGLYDLVTELLHLDSNLLIKLTSLCRIRRLETVWDDESKFEDVAKCRSKVARNLMLECERGRGHNSLLRAGYGGWLLYTAASAGDVDFVLELLGRDPLLVFGEGEYGVTDMLYAAARGKNCEVFNLLLHSALSRKECLAGSEAELEEKLDEGSKVFKRDVMNRALHAAARGGNWELLKQLLGSVSVSQIVSCRDAQGYTILHTAAAWGQIEVVRNLIVSYDIINSDNAQGNTALHVASYRGYLPVVEILIEASPSLTTLTNHYGDTFLHMAVVGFRSPGFCRLDKHTELMKQLTSEKIVNMKNIINVKNNDGRTALHIAVIHNIQCDVVELLMSVPSIDLNIRDADGMTPLDHLRQRSRSASSDVLIKRLISAGGISNYKDYITRNALVNHLRTHGIGASPGTSFRIPDSEILLYTGIENSWDANYDQASVESNSWSSEINNYDSANSPCNSKSSSVNYGARRLKFLLQCTRKRDTKEAASELEDDVSVNSLSSRNNLEDFPTPLRQRYSKMCSLPNNKRTLSIRNYLPSPSAKKYFHDGLMQGVIKVKPQVPLAVHSTSSLFQELSISSNSMQKRVDTMGPSCSNRPMDGGGSLQLNYKQGSFEKKLMNRYFSFGAHGQALEDANSCTMSNRSSKHFSSLVA 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02692 671 ProSiteProfiles Ankyrin repeat profile. 224 245 IPR002110 GO:0005515
Pste3g02692 671 ProSiteProfiles Ankyrin repeat region circular profile. 257 279 - -
Pste3g02692 671 Pfam Ankyrin repeat 339 372 IPR002110 GO:0005515
Pste3g02692 671 ProSiteProfiles Ankyrin repeat region circular profile. 224 245 - -
Pste3g02692 671 SUPERFAMILY Ankyrin repeat 104 395 IPR036770 -
Pste3g02692 671 ProSiteProfiles Ankyrin repeat profile. 257 289 IPR002110 GO:0005515
Pste3g02692 671 Pfam Ankyrin repeats (many copies) 252 299 IPR002110 GO:0005515
Pste3g02692 671 PANTHER ANKYRIN REPEAT, PH AND SEC7 DOMAIN CONTAINING PROTEIN SECG-RELATED 5 416 - -
Pste3g02692 671 SMART ANK_2a 339 370 IPR002110 GO:0005515
Pste3g02692 671 SMART ANK_2a 257 286 IPR002110 GO:0005515
Pste3g02692 671 SMART ANK_2a 374 407 IPR002110 GO:0005515
Pste3g02692 671 SMART ANK_2a 100 129 IPR002110 GO:0005515
Pste3g02692 671 SMART ANK_2a 134 164 IPR002110 GO:0005515
Pste3g02692 671 SMART ANK_2a 224 253 IPR002110 GO:0005515
Pste3g02692 671 SMART ANK_2a 188 216 IPR002110 GO:0005515
Pste3g02692 671 SMART ANK_2a 291 331 IPR002110 GO:0005515
Pste3g02692 671 SMART ANK_2a 18 47 IPR002110 GO:0005515
Pste3g02692 671 Gene3D - 15 421 IPR036770 -
Pste3g02692 671 Pfam Ankyrin repeats (3 copies) 141 245 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02692 Pste-Chr3 19805319 19808718 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02692 193 380 Miscellaneous Gene Families AT2G31820 35.751 2.37e-17 84.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g02375 7 22505752 22508644 Pste3g02692 3 19805319 19808718 PCT