Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02591 AAAGTTGCACTGAATTGATGCTTCTCAGGGTAATAAAAAAACAGCTCAATAGAAAGTTGAACAAGGATTGTTTATTTTTGTAGTTCCATGAGATTTGTATATGTGAAAAAAATTGATGTGCATAAGGGCACTGATGTTGTGGCGTGGTTCCATTTCCATTAAAAAAAGAAGAAGAGCGTGTTAGTGTTTAAAGTTTTGATCATAAATGCAAGTTCGTTACTCCTGCGTTCGAAATCTAAGCACTGGGACTGGGCTCCATTCACGTTCCGCCACCAAACGCGCCACTACCAAACCCCAATCTTCTTCTTTGGCCTCTTTATTCCTTTCTGGATTCAATAAGAGCGACACTCTCTCAAGCCTCAAGCTTCAGCGACCCTCTCATTCAGCTGATTCTTCTGATGGGGTGTTTAAGCAGATTTCTTCTATTTTCCACGCTGGGAAGTCAGTCAAGAAATCTGATTCTGAGAAAATTGATGGGCCAAAGGAGTTGGAAAGAATGTCAAATCTATCATGGGTGTCAAGCATATCTCAAAACAATATATTAATGCAACGGAAGAAGCAATCTCGTAAAAAGAAACAAAAGTCCGTGTTTGAGTTCGCTCAAGAAAACCGTTTTCAGAGGTTAACTGAAGTCTGTGCAAAGATGCTAGGACCAGAAGATACCCTTGAGTTGTTTGGTAAAGTGGGAAGAGAACCAGGTGTGAAAGGATACAATGCATTGGTAGAAATGTGCATAGATAAGGCCAGGGGAACTGATGATGAAGACATTGCAATAGAAGAACTGGGGAGGATTTTTAACCTTTTTAAATCAATGAGGGAACAAGGTTTAGAGCTACAAGAGCAAACATACCGCCCTCTTCTTTTGTATATAATTGACATGTGTATGGTTGAGGAGTTTCAATTTTTCTGTGTTTTTATCAAAGATGAGCATCCCAGTTCAGTTAAAAGACTGGGTTACTATGAAATGTTGCTGTGGTTAAAAGTTGATAATGAAGAAAAGATTCAGGATATTTGTAACTATATTGCTGAGAATGATGGTGAGGACATGTCTGATATACAAGAGAGTTATTTATTGGCTCTTTGTGAAAGTGAACGAACTGACGAGATATTGAAGCTGTTGGGAATCATTGACATAAAAAACCTTTCATCTGCTGAATCTGTAGCAAAGATATTTCAGGCATTAGGAAGATTACTGTTGGAACCTGTAGCAGAGAAGTTCCTTTTAGACTTCAAAACAAGTGATCATGAAGCAGCTAATATTACAAACTTCATTGCTAGATATGTTGTCAGCATTCCAAATTTAACAGTTGAGGATGTCATACAAAAATATAAAGATTTGCATCAAAGACTAGAAGTTTCACCTTCATCCTCATCATATGAGAAGCTCATTTTACATAGTTGTGCATTGCTCAAGGTTCATGAAGCACTTGATATTGTTGATGAAATGTGTGAAGAAGGCTTGACTCTATCAATTGAGGTGTTACACTCGATATTACAAATTTGTGAAGACACGTCTGAATATAATTTGGTCCACCGAATCTACTCTACTATGCGTCGCTACAATTTGGAATCAAATGATGAAACATTTAGATCCATGATAGACTTGTTCTTGAAGATGAAAGATCTTGATGGTGCATATAAGATGCTTGATGATTTGGAGGAATTAAATTTGAAGCCGACAGCAGGGATGTACAATGTCATAATGGCAGAATGTTTTCGAGAGAAGAATTTTAGTGATGGGGTGAGGGTTCTTGAGCACATGCAATGCGCTAATATAAAGCCTGATTCACAGACTTTCAGCTACCTGATTAGCAACTCTGAAACTGAAGAGGATATAGAGAAGTATTATGAAGAGCTTAAGCAATCTGGAATAGTGGCTACAAAGCAAATTTTCGTGGCACTTATAAATGCTTACGCTGCTTGCGGACAGTTGGAGAAAGCAAAAAAGGTAATCTTAGATCCATTGATACCTCCGAAGAGCTTGAACCAAATCAAGGGTGTTCTAGTCTCAGTACTTGCTTCACATGGGCAATTGTCTGAGGCTCTTGTTATTTATGAGGAAACTGAACAAGCTGGACACAAATTGGAGGCAAAACATGAGCACATTCACTCTGAGGGAGAGTTGGATAGGTTGCTTCTGCTACTGGATGAACTGCATGATACAGACTATTGGAACGATGCTTGCTGCAGAATCATCTCTTCTGCTGTTGAATTGTGTAATCTGCTCAAGTATAAGTTCCAAAATGATGAGCAAGTTATGGAAATTCTCTCGGACAAGGTATTTTCTGTGATTGAAGAGTCAGAGTCCAGTCATTCGCACACTTGCCTCGAGTTGCTTTCGGAAATCAAGGATAAGCTTGGGCTTTTGCCTTCACAGAAATGTCAAGATTCTCGCTGTCTTAGTGCAAATGCTAATGCCACTGATCATAATACTGAATGAGGCTCCTCAATAGGGCTTTGTATTGTGCGTTTCATCTAGTTTGCTCTGCTTTACAAACATTTTTTTATGAATTATACTTACCAAGTTGCTATATAATCATTTCTGCCCCCACTTTTTTGGGATTTTCCCTTGCAAGGAATACAATATGTATTTACTCAATGATTATTAATGCAACAATTGTTTTGGCAAATTCTTTTAATGATATATTATCATGTGTGTGGAACAACTGACACCGGA 2677 0.3821 MQVRYSCVRNLSTGTGLHSRSATKRATTKPQSSSLASLFLSGFNKSDTLSSLKLQRPSHSADSSDGVFKQISSIFHAGKSVKKSDSEKIDGPKELERMSNLSWVSSISQNNILMQRKKQSRKKKQKSVFEFAQENRFQRLTEVCAKMLGPEDTLELFGKVGREPGVKGYNALVEMCIDKARGTDDEDIAIEELGRIFNLFKSMREQGLELQEQTYRPLLLYIIDMCMVEEFQFFCVFIKDEHPSSVKRLGYYEMLLWLKVDNEEKIQDICNYIAENDGEDMSDIQESYLLALCESERTDEILKLLGIIDIKNLSSAESVAKIFQALGRLLLEPVAEKFLLDFKTSDHEAANITNFIARYVVSIPNLTVEDVIQKYKDLHQRLEVSPSSSSYEKLILHSCALLKVHEALDIVDEMCEEGLTLSIEVLHSILQICEDTSEYNLVHRIYSTMRRYNLESNDETFRSMIDLFLKMKDLDGAYKMLDDLEELNLKPTAGMYNVIMAECFREKNFSDGVRVLEHMQCANIKPDSQTFSYLISNSETEEDIEKYYEELKQSGIVATKQIFVALINAYAACGQLEKAKKVILDPLIPPKSLNQIKGVLVSVLASHGQLSEALVIYEETEQAGHKLEAKHEHIHSEGELDRLLLLLDELHDTDYWNDACCRIISSAVELCNLLKYKFQNDEQVMEILSDKVFSVIEESESSHSHTCLELLSEIKDKLGLLPSQKCQDSRCLSANANATDHNTE 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02591 744 Pfam PPR repeat 599 624 IPR002885 -
Pste3g02591 744 Pfam PPR repeat 563 583 IPR002885 -
Pste3g02591 744 NCBIfam pentatricopeptide repeat 460 492 IPR002885 -
Pste3g02591 744 NCBIfam pentatricopeptide repeat 495 528 IPR002885 -
Pste3g02591 744 PANTHER OS02G0132600 PROTEIN 22 742 - -
Pste3g02591 744 Pfam Pentacotripeptide-repeat region of PRORP 396 553 IPR033443 -
Pste3g02591 744 Gene3D Tetratricopeptide repeat domain 387 541 IPR011990 GO:0005515
Pste3g02591 744 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 457 491 IPR002885 -
Pste3g02591 744 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 492 526 IPR002885 -
Pste3g02591 744 Gene3D Tetratricopeptide repeat domain 542 717 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02591 Pste-Chr3 18842374 18855072 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02591 359 583 Miscellaneous Gene Families AT4G11690 21.552 1.22e-13 72.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g02591 3 18842374 18855072 Pste3g02591 3 18842374 18855072 ECH