Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02590 ATGGTGGCCGGTGAAAAGAAGGGGAAGTCATTTGGTTTAGGGTGTGACCCTGTGGTGGGATCATTGGCTCCTGCCAAGAAGAGGGAATACAGAGTCACCAATCGCCTCCAAGAGGGAAAACGCCCTCTATACTCTGTCGTTTTCAACTTCATCGATTCCCGCTACATTGATGTTTTTGCCACTGTTGGTGGCAACAAGGTTACTGTTTATCATTGTCTTAAAGGAGGAGTCATTGCTGTTTTGCAATCTTATATAGATGAGGATGTAAACCAGAAGGATGAGTCTTTTTACAGTGTGTGTTGGGCATGCGATATTGATGGGACCCCACTTGTTGTGGCTGGAGGACTCAATGGGAGTTTTGTTGGCCATGGAGACTCCATAAATGAACTCAGGGCTCAAACATTAAAGCCATCTCTTGTGGTATCTGCTAGCAAGGATGAATCTATCCGGTTATGGAATGCTCGTACTGGAATATGTATCTTGATATTTGCTGGAGCTGGGGGACATCGTAATGAAGTCTTAAGTGTTGATTTTCATCCATCGGATATGTATCGCATTGCTAGTTGTGGGATGGATAATACTGTAAAAATATGGTCTATGAAGGATTTCTGGATATATGTAGAAAAATCATACACATGGACAGATCTTCCTTCTAAGTTCCCCACAAAATTTGTCCAGTTTCCTGTATACAACGCTTCAGTTCATATAAATTATGTTGACTGCAATAGGTGGCTGGGTGATTTTATCCTCTCGAAGGTAACAGGGAAGGGAAGATTTTTGTTTGGGAATTGCAGTCAAGTCCTCCTGTTGTCACATCCACAATCAAAATCTCCAATCAGGCAGACTGCTACTTCCTTTGATGGAAGTACTATATTGAGTTGCTGTGAGGATGGGACAATATGGCGCTGGGATGATGTTTCAAACCCTTCAACCTAACTTGTCTTCATGCAATACCAATCTGATGTGCATGTCAAACATGAGGGCATTTTTGTTTTATCAGTTTAACCAGTCATGTACATCAGCAGTTCATTTTTTCTTCGATAAGGCTTATAATTTTAAAGGTTCAACTGATAAATCAGTTAAAATTGTTTCC 1093 0.4117 MVAGEKKGKSFGLGCDPVVGSLAPAKKREYRVTNRLQEGKRPLYSVVFNFIDSRYIDVFATVGGNKVTVYHCLKGGVIAVLQSYIDEDVNQKDESFYSVCWACDIDGTPLVVAGGLNGSFVGHGDSINELRAQTLKPSLVVSASKDESIRLWNARTGICILIFAGAGGHRNEVLSVDFHPSDMYRIASCGMDNTVKIWSMKDFWIYVEKSYTWTDLPSKFPTKFVQFPVYNASVHINYVDCNRWLGDFILSKVTGKGRFLFGNCSQVLLLSHPQSKSPIRQTATSFDGSTILSCCEDGTIWRWDDVSNPST 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02590 311 Gene3D - 25 307 IPR015943 GO:0005515
Pste3g02590 311 ProSiteProfiles Trp-Asp (WD) repeats profile. 120 162 IPR001680 GO:0005515
Pste3g02590 311 ProSitePatterns Trp-Asp (WD) repeats signature. 140 154 IPR019775 -
Pste3g02590 311 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 166 201 - -
Pste3g02590 311 SMART WD40_4 156 199 IPR001680 GO:0005515
Pste3g02590 311 SMART WD40_4 265 304 IPR001680 GO:0005515
Pste3g02590 311 SMART WD40_4 113 153 IPR001680 GO:0005515
Pste3g02590 311 PRINTS G protein beta WD-40 repeat signature 186 200 IPR020472 -
Pste3g02590 311 PRINTS G protein beta WD-40 repeat signature 291 305 IPR020472 -
Pste3g02590 311 PRINTS G protein beta WD-40 repeat signature 140 154 IPR020472 -
Pste3g02590 311 Pfam WD domain, G-beta repeat 167 199 IPR001680 GO:0005515
Pste3g02590 311 Pfam WD domain, G-beta repeat 118 153 IPR001680 GO:0005515
Pste3g02590 311 Pfam WD domain, G-beta repeat 264 304 IPR001680 GO:0005515
Pste3g02590 311 SUPERFAMILY WD40 repeat-like 31 305 IPR036322 GO:0005515
Pste3g02590 311 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 120 157 - -
Pste3g02590 311 ProSiteProfiles Trp-Asp (WD) repeats profile. 166 201 IPR001680 GO:0005515
Pste3g02590 311 PANTHER POLYCOMB PROTEIN 267 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02590 Pste-Chr3 18829828 18835186 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g02590 3 18829828 18835186 Pste3g02590 3 18829828 18835186 ECH