Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02490 ATGAGGGTGTGGACAAAAGCTAGCGGGGCCATCAAGGACAAGAACAGCATATGGGTTGCAAAGTTATCACGAAAGGGTCCATTCCACAACCCTGATTTAGAAACCGTGATCATCAAGGCAACGAGCCATGATGAAGGTGGCATAGATACGAAGAACGTGCAAAGAGTGTTTCATTGGATACGAACCTCGCCCTTGTACCTGAAACCTCTTATATGGGCTCTCTCTATGCGAATGCAAAAGACTCGAAGCTGGGTTGTGGCGCTTAAAGGGTTGATGCTCATCCATGGTGTTTTCTGTTGTGATATCCCTGTGGTGAACCAGATGGGGAGGTTACCCTTCGACCTGTCAAACTTCTCTGATGGCCATTTGAGTGCCGCTAAGGCTTGGAGCTTCAACGCTTTTGTTCGTGCCTATTTTGCTTATTTGGATCAAAGGTCAGCATTTGTGTCCTCCGCGGTTACGAAGCAAAAGAATAACAAGAAGGAGGTGGAGGAGACGTTGATGGAAGAACTTGAGAAGTTGCAAAAGTTGCAAGGAATGATTGATATGCTTCTTCAGATCAGGCCAAGGAATGAGGACACCAATGTTGGTCTTGTTCTTGAGGCTATGGATTGTGTTATAGTTGAGATTTTTGGCGTGTATAGTAAGTTTTGCAACAAGATTGCCAAGGTTTTGCTGAGGATATTTGAGGTAGGCGGGAGGGTCGAAGCTTGTATTGGCCTCAAGGTTCTGCAGAAAGCATCAATTCAAGTCGAGGAGATGTCTTTGTTCTTTGAGTTTTGCAAGTATATTGGGGTCCTCAACGCCTCTCAATGCCCCAAGATTGATACAATTTCTGAAGAAGATATTCGAGAGCTTGAGAGAATAATCCATGGTGCCTCTTTTAAGAAGGCTAGTGTTGTGGAAAATGATGAGGAAAAGGCCATTGTGCTCAGAGATTGTTCGCCCACTGCAACGGTTTCTCACCAGAAGGAGTCAGAGAATGGTTTGACCACCGTAATCACTCACCAATGGGAGCTATTCGATGATGATGTAATCGTTGGTGCTAAAGGAATCCATAATAATGCCTCTAATGGTGCAAAGGCTATTGGAACGACAGCCAACCCTTTTGAGGAATCATGTAGCCTTGTACCTTATGTTCCTGTTCACCATCAATCTCTTCCTGATCTAATTAGTTTGTAG 1182 0.4459 MRVWTKASGAIKDKNSIWVAKLSRKGPFHNPDLETVIIKATSHDEGGIDTKNVQRVFHWIRTSPLYLKPLIWALSMRMQKTRSWVVALKGLMLIHGVFCCDIPVVNQMGRLPFDLSNFSDGHLSAAKAWSFNAFVRAYFAYLDQRSAFVSSAVTKQKNNKKEVEETLMEELEKLQKLQGMIDMLLQIRPRNEDTNVGLVLEAMDCVIVEIFGVYSKFCNKIAKVLLRIFEVGGRVEACIGLKVLQKASIQVEEMSLFFEFCKYIGVLNASQCPKIDTISEEDIRELERIIHGASFKKASVVENDEEKAIVLRDCSPTATVSHQKESENGLTTVITHQWELFDDDVIVGAKGIHNNASNGAKAIGTTANPFEESCSLVPYVPVHHQSLPDLISL 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02490 393 SMART enth_2 31 158 IPR013809 -
Pste3g02490 393 ProSiteProfiles ENTH domain profile. 25 156 IPR013809 -
Pste3g02490 393 SUPERFAMILY GAT-like domain 169 292 - -
Pste3g02490 393 CDD ANTH_N_AP180_plant 33 148 - -
Pste3g02490 393 Gene3D ANTH domain 154 307 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Pste3g02490 393 Gene3D - 3 152 IPR008942 -
Pste3g02490 393 PANTHER CLATHRIN ASSEMBLY PROTEIN 4 322 IPR045192 GO:0048268|GO:0072583
Pste3g02490 393 Pfam ANTH domain 32 291 IPR011417 GO:0005543
Pste3g02490 393 FunFam Putative clathrin assembly protein 155 307 - -
Pste3g02490 393 SUPERFAMILY ENTH/VHS domain 32 149 IPR008942 -
Pste3g02490 393 FunFam Putative clathrin assembly protein 7 153 - -
Pste3g02490 393 Coils Coil 153 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02490 Pste-Chr3 17709081 17710262 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g02490 3 17709081 17710262 Pste3g02490 3 17709081 17710262 ECH