Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02479 ATGACGGCTGAGGAACGGTCTGATGAAATGTGCAAACGATCCGCCATGGCCAACTTCCTCGCTCAGTTCCAGACAATTAAGAACACCTCCGATCGCCTCGTCATTTCAGTGGAGGATGTGAGTGACTTGTGGCCAACTGTCAAGCCTGCTTTTGAGGGACGTTTGCCGTTCAAACGGGCGACTTTGAATAACAAGACGCGGAACCCTGTATTTGTCGAGTCATTGCAGGCCGAGTTCATATTAACTACCGATTCAAGACTGCGTAGCCGATTCCCTCAGGAGCAATTTTTATTTTGGTTCAGAGAGCCATATGCAACTATTGTACTAGTCACCTGTGAGGATCTGGATGAGTTCAAAACCATCCTTAAACCACGCTTGAAATTAATTGTCCAAAATGATGAAAGGGAGTGGTTTGTTGTATTTGTATCTAAGGCTCATCCAGCTAATGATCAGGCAAACAAAATGGCCAAGAAAGTATATGCTAAACTCGAAGTTGAGTTTAACACCAAAAAAAGAGAAAGATGCTGCAAATATGATATGCATTTCCCTGAAGCAAACTTTTGGGAGGATCTAGAATCAAAGATAATGGAATGCATTAGAAATACCTTAGATAGGCGTGTACAATTTTATGAGGATGAGATACGAAAGCTCAGTGAACAGCGCCTTATGCCAGTCTGGAACTTTTGCAATTTTTTCATTCTGAAGGAAACCTTGGCTTTTATGTTTGAAATGGCTCACCTTCACGAAGATGCCTTACGGGAATATGACGAACTAGAACTCTGCTATCTTGAAACAGTTACTGGAAAGCAGAGAGACTTTGGAGGGGCAGATCATGGTGACGATCAGGCAACATTGCTTAATCCGGGAAAAAAACCATTGACACAGATCGTTCAAGAGGATTCATTTCGGGAATTTGAATTCAGACAGTATCTATTTGCTTGTCAATCAAAGCTCTTATTCAAGCTAAATCGTCCCATTGAGGCTGCATCACGAGGCTATTCATTCATTATAAGCTTCTCGAAATCCCTAGCATTGCGTGAGCGTATTTTGCCTTTTTGTATGCGTGAAGTCTGGGTAACAACTGCTTGCTTGGCTTTAATTGAAGCAACCACTTCTAATTATAATGATGGACAAGTGGCGCCTGACATAGAAAAGGAGTTCTTTCGTCTTCTGGGTGACCTATATTCTCTAGCTAGAGTTAAGTTCATGAGGCTTGCCTATTTAATTGGGTATGGAATTGATATAGAAAGAAGTCCTGTCAACAGTGCTTCCCTCAGCTTGCTACCTTGGCCTAAGCCAGCTGTCTGGCCTTCAGTTCCCGCTGATGCATCAACTGAGGTGCTTGAGAAAGAAAAGCTGATTCTCCAAACAACTTCTAGAACGAAACATTTTGGTATCCAGAGGAAACCCCTGCCTCTTGAGCCTACTGTTCTTCTGCGAGAGGCCAACAGGCGGAGGGCTTCACTTTCAGCTGGAAATGTGTCTGAAATGTTCGAAAGTCGCCAGGTTCCAATGGATGGATCAGGTTTCGATTCATCCACAAGAATGTCAGCACAGAAAGCACTTCCAAGTTCCATGTCACGTACAAATTCTTCGCCAGGAAACTTTGATAGCTCAATTGACCGACCGATGAGGCTTGCTGAGATTTTTATTGCTGCTGAGCATGCTTTGAAGCAAACAATTTCTAATCCAAAATTGTGGAAATCATTATCATCATCTGAAGAGTTTGAGCAAAAATATTTAGAGCTAACTAAAGGTGCTGCTGACAATTACCATCGTTCCTGGTGGAAAAGACATGGTGTTGTTCTTGATGGTGAGATAGCAGCTGTGGATTTTAAGCATGGACATTTTGATCAAGCTGCAAAGTCATATGAGAAGGTTTGTGCACTGTATGCTGGTGAAGGATGGCAGGATTTATTGGCCGAGGTCCTACCCAATTTAGCTGAGTGTCAGAAGATACTTAATGATCAAGCTGGCTACTTATTATCTTGTGTAAGGTTACTTTCTCTTGATGAAGGATTATTTTTTACCAAGGAGCGTCAAGCCTTTCAGTCAGAAGTTGTTCGTCTTGCTCATAGTGAAATGAAAGACCCTGTACCTCTTGATGTATCTTCATTAATTACATTTTCGGGAAATCCTGGGCCTCCATTGGAGTTATGTGACAGGGATCCGGGTATCCTTTCTGTAACTTTATGGAGTGGTTTTCCAGATGATATAACTCTTGATTCAATCAGTCTTACATTAAATGCTACGTATAATACTGACGAAGGTGTAAAGGCATTGAAGAGTTCTACAGCTATTGTGTTACACCCTGGTCGAAATACTATTACCTTGGATCTACCACCACAGAAACCAGGATCTTATGTTCTTGGAGTTCTTACTGGGCAGATTGGGCAGTTGCGGTTTAGATCTCATAGTTTTTCAAAAGTTGGTCCTGCAGATAGTGATGATTTTATGAGTTATGAAAAACCAGCTAAACCCATTCTTAAGGTTTTCAAACCTAGAGCCCTTGTTGATCTTGATGCTGCTGTTTCATCTGCTTTGTTGATAAATGAAGACCAATGGGTTGGTATTTTAGTTCAACCAGTAAATTACTCCCTCAAAGCTGCTGTCTTGCATATTGATACTGGTCCAGGGTTGGAGATTAAAGAGTCACACCTAATTGAAATGGAAAGCAATGCTGGTGTATTACAGAATGATAATGACCAGGTGCAGAATGATGGTGCTCAGATAAAAACTCTAGATTCTGATAAAAAATTTGAACGTTTGACTCTTCATGATGGTAAAATCGAATTTCCAAACTGGGCAAGTGACATCCCTTCTATTCTTTGGGTTATGGTTCGTGCCATCAGTGACACACTCAGCAGAGGATCTTCTTCAGCCACAACAAGGAGAGAAAGTATTGTAGATGGAATGAGAACAATAGCTCTGAAACTTGAATTTGGAGCATTCCACAATCAGATATTTGAAAGGACCCTAGCAGTGCATTTCACGTATCCTTTCCATGTGAGGACACGTGTTACTGATAAATGCAATGATGGTACCCTGCTTCTGCAGGTAATACTTCACTCTGAAGTAAAGGCTACACTGACCATATATGATGCCTGGCTTGATCTTCAAGATGGATTTGTTCATACTGGACAAACTGAGGGTAGACCTAATTCGAGGTTCTTCCCACTAATCATATCTCCCACTTCCAAAGCAGGAATATTGTTTAGTATCTGCCTAGACAAGACAAATGCAGAAGAAGCCAGGAAGCAACCAGAAAGCATATTAAATATCAAATATGGAATTTCTGGCGATAGAACAATTGGAGCCCACCCTCCTATCGTGAATGAATCTACTGGAGTTGATGGTGCTAGACAGGAGTTGATCTTCAGGAGTGCAATTACTTTGCAAAAGCCTGTGCTTGATCCATGTCTCGCTGTTGGTTTTCTTCCTCTCCCTTCAGATGGCCTAAGAGTTGGACAACTAGTTAAGATGCAATGGAGAGTGGAAAGGTTAAAGGATTTCGATGAGGAAGGAGTTTCTAAACAGAATGATGAGGTGCTATACGAGGTAAACGCAAATTCTGGAAATTGGATGATAGCCGGGAGGAAAAGAGGATATGCATCTCTTTCCACAAAACAAGGTGCAAGAATTGTTATCTCAGTATTATGCATGCCACTGGTGGCTGGTTATGTTCGCCCTCCCCTACTTGGGCTTCCAGATGTTGATGAGGCAAATATAAGTTGCAAACCTGCTGGGCCACATCTGGTTTGTGTTTTGCCACCACCTCTCAGCTCCTCCTTCTGTATTCCAGTCAATTCATGAGTTGCCACTGTGTCTACTCAAGCTTGATTGAGTTTGTGTTCATAGGATATTAGGATGTTTGAGAAAATTTTTGGTTTTAAGTAGGAAAGTGTAACTTTGTGCCTGTTAATTTCATTGCATGAAAAATCTCTAGTTGGATTTGTGTTACACCTCCTTCATGCAGTGTTCAAAGTATCAGCAGCAACCCTGGCGCATGTACAGTGGAATTTTGTGCTCTTCCTTGTACGATAGACAGATACACGGACCATAAAACATTCTTTTGTCTCATATATAAAATATTAAATTATAAAAGTTGGTAGGAAC 4116 0.4142 MTAEERSDEMCKRSAMANFLAQFQTIKNTSDRLVISVEDVSDLWPTVKPAFEGRLPFKRATLNNKTRNPVFVESLQAEFILTTDSRLRSRFPQEQFLFWFREPYATIVLVTCEDLDEFKTILKPRLKLIVQNDEREWFVVFVSKAHPANDQANKMAKKVYAKLEVEFNTKKRERCCKYDMHFPEANFWEDLESKIMECIRNTLDRRVQFYEDEIRKLSEQRLMPVWNFCNFFILKETLAFMFEMAHLHEDALREYDELELCYLETVTGKQRDFGGADHGDDQATLLNPGKKPLTQIVQEDSFREFEFRQYLFACQSKLLFKLNRPIEAASRGYSFIISFSKSLALRERILPFCMREVWVTTACLALIEATTSNYNDGQVAPDIEKEFFRLLGDLYSLARVKFMRLAYLIGYGIDIERSPVNSASLSLLPWPKPAVWPSVPADASTEVLEKEKLILQTTSRTKHFGIQRKPLPLEPTVLLREANRRRASLSAGNVSEMFESRQVPMDGSGFDSSTRMSAQKALPSSMSRTNSSPGNFDSSIDRPMRLAEIFIAAEHALKQTISNPKLWKSLSSSEEFEQKYLELTKGAADNYHRSWWKRHGVVLDGEIAAVDFKHGHFDQAAKSYEKVCALYAGEGWQDLLAEVLPNLAECQKILNDQAGYLLSCVRLLSLDEGLFFTKERQAFQSEVVRLAHSEMKDPVPLDVSSLITFSGNPGPPLELCDRDPGILSVTLWSGFPDDITLDSISLTLNATYNTDEGVKALKSSTAIVLHPGRNTITLDLPPQKPGSYVLGVLTGQIGQLRFRSHSFSKVGPADSDDFMSYEKPAKPILKVFKPRALVDLDAAVSSALLINEDQWVGILVQPVNYSLKAAVLHIDTGPGLEIKESHLIEMESNAGVLQNDNDQVQNDGAQIKTLDSDKKFERLTLHDGKIEFPNWASDIPSILWVMVRAISDTLSRGSSSATTRRESIVDGMRTIALKLEFGAFHNQIFERTLAVHFTYPFHVRTRVTDKCNDGTLLLQVILHSEVKATLTIYDAWLDLQDGFVHTGQTEGRPNSRFFPLIISPTSKAGILFSICLDKTNAEEARKQPESILNIKYGISGDRTIGAHPPIVNESTGVDGARQELIFRSAITLQKPVLDPCLAVGFLPLPSDGLRVGQLVKMQWRVERLKDFDEEGVSKQNDEVLYEVNANSGNWMIAGRKRGYASLSTKQGARIVISVLCMPLVAGYVRPPLLGLPDVDEANISCKPAGPHLVCVLPPPLSSSFCIPVNS 1270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02479 1270 Coils Coil 887 907 - -
Pste3g02479 1270 MobiDBLite consensus disorder prediction 502 538 - -
Pste3g02479 1270 Coils Coil 200 220 - -
Pste3g02479 1270 MobiDBLite consensus disorder prediction 506 538 - -
Pste3g02479 1270 Pfam Trafficking protein particle complex subunit 10, TRAPPC10 1152 1229 IPR022233 -
Pste3g02479 1270 PANTHER EPILEPSY HOLOPROSENCEPHALY CANDIDATE 1/TMEM1 23 1267 IPR045126 GO:0048193|GO:1990071
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02479 Pste-Chr3 17559915 17573167 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g02479 3 17559915 17573167 Pste3g02479 3 17559915 17573167 ECH