Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02437 GTGCTTCCACAATATGAAATTCCACGCTCTCTCATGAATGTTTCGACACACGCAGACGCAGACCCAAACTTTCATTCAACTAAGCCATGCCCCCTAGGAACTAGGAACTAGGAACTAGCAATGCCCCATACTCAAAACCCTAACTAACCTTTTCAGATTTCCTTTTAGACCCACCAAACCGATCCCTTCCATTTTTCTCCTAAACCTCTTCTCTTTCTTTTCCCTCTTTGCTTCAAATCACCTTCTCTTCTCAAACACCCACCTTTCTGTTTCTCAATTTCTTTTCCTCGGTACCCTTTCCACTGTTTCTTGATTTCAATTCAATCCAATTCATACTTGTTCCACTTTCACAAATTCTCTCTTTTTTCACAGGGGTGTGCTTTTTTCCTTTTTGTCGTATTAATTTTGCAACTGAAGAAGGTCTTTGATCTTCGATTTTGAAAGGTGATTTTGTGGGGTGTGTGATTAGTTCTCTTCTGATGTTTTATTTCCAATCATTCTTTCAATTATCACCTGCTAATTATCTATCATCTAGACCTCCTTTCTCCTACTCAATTTCCCATGTTTTTCTCCCCTCTGATGTCTTCTTCATATGCTGCTTCAATTGCCTGAGATTTCGTCTCAAAATTTGATGCTGTGATCCAGAGGGGAGTTGCTGGTTGCTGACACTCTGAATCTTTCTGCACGTTCTTTCAATCACATCAAAATTTCTTTGGTCAGGAGCAAGAAAGAGAAAGGATGGGAGAGCGTTGTAGACACTTTTCCATTGAGGAATTGCCATCACATTTAGTTTTAGAAATTCTTTGCTCGGGCAGGCTCAGTGCAATGGACCTAGTTTGTTTAGAATTGACTTCCAAAACATTTGGTGGCAGTCATGGTTTGCACCCTTTCAAGTTCAAGTCCTTGGTTGATTTTGCTGCATTTCAACTCTGTGCCTCCCATGTTACCTATTCTAGGATGGCTTTGAATTCTCAGAGGGAGTTGTACGATAGATGTGAAGGAAATTGGAAGCGCGTTTTGAGGTTCTTGCAGTCTGTGGAACAATCCTCTCAGATGGTCGAGACGTCTGCAGGCAATATGCAAATAACAACTGGAAAGTATCACACCCTGTTGATCAGCAATTCTTCTGTCTATTCCTGTGGTTCTGGTTTGTGTGGTGTACTTGGTCAAGGGCCTGAAACAACACAGTGTGTAGCGCTTACCCAGATCGGTCTCCCACCTTTGGCACGTGTGGTTCATGTTTCAGCCTCTTTTAACCATGCAGCTTTCGTTATGCAATCTGGAGAGGTATTCACATGTGGAGACAATTCATCTTCTTGCTGCGGGCATAGAGATACAAGCCGACCAATTTTCAGGCCACGGCTTGTTGAATCCCTGAAGGAGATTCAATGCAAACAGGTTGCAGCGGGGCTTAACTTCACTGTCTTCCTCTCCAGACAAGGTCATGTTTATACGTGTGGAACCAACACACATGGCCAACTTGGTCATGGTGACACTCAGGACAGACCAACCCCCAAAATGATTGAAGTCCTTGGCTCTGTTGTTCAGATTTCTGCAGGACCAAGCTATATCTTATCTGTAACTGAAAATGGAACAGTATACTCCTTTGGAGCAGGTGCTAATTTCTGTCTTGGCCATGGTGAACAACATGATGAGTTTCAGCCACGTGCAATGCAGAAATTTAGAAGGAAAGGTATTCATATTGTCCGTGTATCAGCTGGGGATGAGCATGCAGTGGCACTTGATTCAAATGGATTTGTATATACATGGGGCAAGGGATACTGTGGTGCTTTAGGCCATGGAGATGAGATTGAGAAGACAACTCCAGAGATGTTGACTAGTCTCAAGAATAAATTGGCTGTTCAGATCTGTGCAAGGAAGAGGAAAACATTTGTTCTAGTTGATTCTGGTTCAGTATATGGCTTTGGCTCCATGGGATTTGGCAGCCTCGGATTCCTAGATAGAAGGTTATCTGATAAAGTATTGAAACCCCGAATCTTAGATACCTTAAGAGCTCACCATGTTTCTCAGATTAGCACTGGCTTGTACCACACTGTGGTGATCACTAGCAAGGGACAGATATTTGGCTTTGGAGACAATGAAAGAGCACAACTTGGTTATGACACATTAAGAAGCTGCCTTGAGCCCACTCAAATTTTCATTAAAGACGTATCTGAAGATGTAGAAAGCATCTGAGGCTCCCAAAGCAATCACCTCTTTTTATATGTCGTTCTGATATATCAGTTACCTGACATTTCTAGCATCATATTGATCACTACCGTTAAAGTTGAACGTTCGATATTATATATTACATTATAGTTTTTTAAAATAATAACACATGACACGCAACATCGTCACCATTTTTCAATACTATAAGGGTCTGCTTTTCTTTTGCTAAGAAAATTCTAGAACTCCTTTTCTATTTTACTGATAACTGAACTCAAGGGTTATATCGGCTTT 2460 0.4146 MGERCRHFSIEELPSHLVLEILCSGRLSAMDLVCLELTSKTFGGSHGLHPFKFKSLVDFAAFQLCASHVTYSRMALNSQRELYDRCEGNWKRVLRFLQSVEQSSQMVETSAGNMQITTGKYHTLLISNSSVYSCGSGLCGVLGQGPETTQCVALTQIGLPPLARVVHVSASFNHAAFVMQSGEVFTCGDNSSSCCGHRDTSRPIFRPRLVESLKEIQCKQVAAGLNFTVFLSRQGHVYTCGTNTHGQLGHGDTQDRPTPKMIEVLGSVVQISAGPSYILSVTENGTVYSFGAGANFCLGHGEQHDEFQPRAMQKFRRKGIHIVRVSAGDEHAVALDSNGFVYTWGKGYCGALGHGDEIEKTTPEMLTSLKNKLAVQICARKRKTFVLVDSGSVYGFGSMGFGSLGFLDRRLSDKVLKPRILDTLRAHHVSQISTGLYHTVVITSKGQIFGFGDNERAQLGYDTLRSCLEPTQIFIKDVSEDVESI 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02437 485 Pfam Regulator of chromosome condensation (RCC1) repeat 235 275 IPR000408 -
Pste3g02437 485 Pfam Regulator of chromosome condensation (RCC1) repeat 338 379 IPR000408 -
Pste3g02437 485 Pfam Regulator of chromosome condensation (RCC1) repeat 284 335 IPR000408 -
Pste3g02437 485 Pfam Regulator of chromosome condensation (RCC1) repeat 181 231 IPR000408 -
Pste3g02437 485 PRINTS Chromosome condensation regulator RCC1 signature 287 301 IPR000408 -
Pste3g02437 485 PRINTS Chromosome condensation regulator RCC1 signature 380 398 IPR000408 -
Pste3g02437 485 PRINTS Chromosome condensation regulator RCC1 signature 441 462 IPR000408 -
Pste3g02437 485 PRINTS Chromosome condensation regulator RCC1 signature 184 200 IPR000408 -
Pste3g02437 485 PRINTS Chromosome condensation regulator RCC1 signature 130 146 IPR000408 -
Pste3g02437 485 PRINTS Chromosome condensation regulator RCC1 signature 271 287 IPR000408 -
Pste3g02437 485 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 182 234 IPR000408 -
Pste3g02437 485 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 235 284 IPR000408 -
Pste3g02437 485 SUPERFAMILY RCC1/BLIP-II 124 475 IPR009091 -
Pste3g02437 485 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 285 338 IPR000408 -
Pste3g02437 485 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 446 485 IPR000408 -
Pste3g02437 485 Gene3D - 285 483 IPR009091 -
Pste3g02437 485 PANTHER BTK-BINDING PROTEIN-RELATED 399 473 - -
Pste3g02437 485 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 325 335 IPR000408 -
Pste3g02437 485 Gene3D - 53 284 IPR009091 -
Pste3g02437 485 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 432 442 IPR000408 -
Pste3g02437 485 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 391 445 IPR000408 -
Pste3g02437 485 Pfam Regulator of chromosome condensation (RCC1) repeat 429 457 - -
Pste3g02437 485 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 339 390 IPR000408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02437 Pste-Chr3 17220005 17225538 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g02437 3 17220005 17225538 Pste3g02437 3 17220005 17225538 ECH