Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02434 AAAATTATAGCATAGAAACTCATTTAAAATTTTCTTTCTTTCAAGTACCAATGTATCAGTATTGTATTTGGTAATGGGTTGGAAATCATCATATTTCAGAGTGGTATATGGCTGTACAAAACAAATTTCAGGTGAAGGAATGGTATTTTTTTGGTGAGTTGAAATTGCACCAAATCGGAAAGAAAGAAAAGGCAGCAGTGTGAATTGTGAATTGTGAATTGTGAATTGTGATGCTAGAAAAGAAGTATTATTATAATGATTAGCATTATTATCCTTTTCAAAATCGGGATCTGATCTGCCATGGATCGGTTGCTGAAAGCGGCGAGAGCCTCTGGTTCTCTTAACCTCTCCAATCGCTCCCTCACAGAAATTCCCCACGAGGTTTACCGGAATCTCGAGGGTCTCGCCGGCGACGACAAGTGGTGGGAGGCTGTGGAGCTTCAGAAGCTTATTCTGGCTCACAATAGCATTGAATCGTTGAAGGAAGATATCAGGAATTTGCCTTTTCTTGTTGTGTTGAACCTTAGCCACAACTGTCTCTCTCACCTTCCTGCTGCTATAGGAGAGCTGCCTCAGTTGAAGATGTTGGATGTTTCGTTCAATTCGTTAGTTAAAATACCGGAGGAGATAGGATCGGCTGCATCGCTTGTGAAGCTTGATTGTTCAAATAATCAGCTCACGGAACTTCCTACCTCGCTTGGCAGATGCTTAGAATTGTCAGACTTAAAGGGATCAAACAATCTTATTACAAGCTTGCCAGAAGATTTAGCCAATTGTTCGAAATTGTCTAAGCTAGATATGGAGGGAAACAAGCTAATAGTGATATCTGAAAATCTCATGTCATCATGGACCATGCTTACTGAATTCAATGCATCAAAAAATTTGCTGAATGGGATACCAGTCAGCATTGGAGGCCTTTCACGTCTAATTCGTCTTGACCTTCATCAAAACAAAATATCAGCAATCCCTTCATCAATCATTGGTTGTCATTCACTTACAGAGCTTTATTTGGGGTCAAATTCTAACCTATTCCGATGCAAGAATAACAATATTTCTACAGTACCAGTGGAGATAGGGGCCCTTTCTCAACTTGGAACTTTAGATCTTCACTCTAACCAGCTGAAGGACTATCCAGTAGAGGCATGCAAATTGAGTCTTCTAGTCCTGGATCTTTCTAATAATTCATTGAGTGGTTTACCCCCTGAAATGGGCAAAATGACTACATTGAGGAAACTTCTGCTTACTGGAAATACTTTGAGAACTCTTCGAAGCTCATTAGTATCTGGACCTACACCAGCGTTATTGAAGTTTCTCCGAAGCAGACTTTCTGAAGATGAAGATTCTAAAGCTGTAACCCCAACAAAAGAAGAGATGATCACAATGGCTACCCGGTTGTCTATCTCTTCAAAGACAGTAGACATTCATTTCCTCACCGATTGCCCATCTTATAATTGTGTTCAGGAACTTTCTATGGAAGGGCTGGGGTTGAGTGCTGTTCCATCAGAAGTATGGGAATCAGGGGAGGTCTTAAAACTTAATCTTTCCAGAAATTCCATCCAGGAGTTGCCAGTTGAACTTTATTCTTGTGTTTCCCTCCAGACATTGATTTTATCTAAGAATCAAATTAAAGACTGGCCAGGTTCAATTCTTAAATCACTTTCAAGTCTTTCATGTTTGAAGCTGGACAACAATCCCCTGAGACAGATACCTTCAGATGGCTTTGAAGTGGTGCCTAAGCTTCAGATCCTGGATCTAAGTGGTAATGCAACTTCATTACTAGATGGTCCTGCATTTTCTAGTTTGCCATACTTGCAAGAGCTGTACCTAAGAAGAATGAGGCTCAGTGAAGTCCCATCAGATATAGTGGGGCTGCATCAGCTACGGATCCTTGACTTGAGTCAGAATTCCCTTCAATCAATTCCAGTGGGGCTAAAAGATCTCACTTCTCTCAAGGAGCTTGACGTATCTGATAACAACATTTCAGTCCTTCCACCTGAGCTGGTGAGAAACACAGTCCCTCTTCAAAAGAGGAGAGTGGGTGTTCAGTTTGTGGACCTAACTAGCAAATGCCAACAGTTAAAAGCAATTATTTAAGTAGAATACAAAGAGTATAGATTAAGGAAAAATAATTACACAATAAAAAAGATATGCATAATTAGTTAAAGAAATTTAAGTTTATAATTAAGAAAAATAAAGTTAGAGAATAGAAAGGACATTTATCATTCTTTATGGGAGAGCACACGTGAGAGTGGATTCTATTTACATTATAAGGGCATGCCATTTCTTTATCGTTACAGTAGTTCTCATACAAATGTATTTTCATTGATAAAAAAATAAAAAAATAAAAAAATGTATTTTTTGGGAAATAGAGGGTGCTATAAGTCTCCATGAAGTATGTAAAAGTCAAAAGGAAAATTTGGTTGAATTTATTTTGTCTCAGTCTCCACGCAGTCACTTTATCATCAGCATGTGTGCTATAACTTGATTTGTTGCATTTATTTTAAGAACATTATCTGATCAGGGTTATCTGGAACCAAGCCTACAGGCATTGAGACTTGATGGGAATCCTCTCAGAAGGTAACTCCCCTCTGCCCCGACTTTTCCTTATGCTTTCTTAAAACGGAGAACTTTTTTTGACAATAATATGGGTTTTATAACTACTAGTGGCGTTTGCATTTGTTATATTTGCGCTTTAGGGCTAACAAATTTTGAAATGCGGAAAGATAAATTCTAAAGATCATTTGCCAAGATGTAACTGTTCCATAATCAACCGCGTCTTTGATTGAACTGATGGTGCTTCGACACTTCTGTGATATCAATTTCATTATTTTTACATGTTTTGCATTAGGATTAAATTACCTAATCATCCCTATAAAGTTAAGCACTTTCTCAACTTACTCTCAATTATGTCTTTAAATCCTCCTGAATTTTGAATTAGAGTGAAAAATGTTAAATTTTGTCAGCTGTACTTGATTTAACTAGAGTTTTTATGTTTGGATTAATGAAAAGGAATGAATTGGAAATGAACGGTATGAAGTAAATTTAAGAAACATTGTTTCGGTTAGGATTAAAAGATAAATGATGGAATGGAATGGGAATTATGAATTTCATTTCATATGATTCTTCCTTTTTCACCAATTCTATTATGTTTCATTCCACTCTATTCCCTTTTAATTCATTTCATTTCATCCCATTTGTTTTTGTTAATCCAAACATAGTCTATACTTGTAAATTGAAGAAGTATTAATGTCTCTTTATTTGTTTCAGTATTCGAAGGACTGTCTTGGA 3288 0.3698 MDRLLKAARASGSLNLSNRSLTEIPHEVYRNLEGLAGDDKWWEAVELQKLILAHNSIESLKEDIRNLPFLVVLNLSHNCLSHLPAAIGELPQLKMLDVSFNSLVKIPEEIGSAASLVKLDCSNNQLTELPTSLGRCLELSDLKGSNNLITSLPEDLANCSKLSKLDMEGNKLIVISENLMSSWTMLTEFNASKNLLNGIPVSIGGLSRLIRLDLHQNKISAIPSSIIGCHSLTELYLGSNSNLFRCKNNNISTVPVEIGALSQLGTLDLHSNQLKDYPVEACKLSLLVLDLSNNSLSGLPPEMGKMTTLRKLLLTGNTLRTLRSSLVSGPTPALLKFLRSRLSEDEDSKAVTPTKEEMITMATRLSISSKTVDIHFLTDCPSYNCVQELSMEGLGLSAVPSEVWESGEVLKLNLSRNSIQELPVELYSCVSLQTLILSKNQIKDWPGSILKSLSSLSCLKLDNNPLRQIPSDGFEVVPKLQILDLSGNATSLLDGPAFSSLPYLQELYLRRMRLSEVPSDIVGLHQLRILDLSQNSLQSIPVGLKDLTSLKELDVSDNNISVLPPELVRNTVPLQKRRVGVQFVDLTSKCQQLKAII 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02434 597 Gene3D Ribonuclease Inhibitor 2 175 IPR032675 -
Pste3g02434 597 ProSiteProfiles Leucine-rich repeat profile. 285 306 IPR001611 GO:0005515
Pste3g02434 597 Gene3D Ribonuclease Inhibitor 176 244 IPR032675 -
Pste3g02434 597 ProSiteProfiles Leucine-rich repeat profile. 46 68 IPR001611 GO:0005515
Pste3g02434 597 SUPERFAMILY L domain-like 247 570 - -
Pste3g02434 597 SMART LRR_typ_2 285 305 IPR003591 -
Pste3g02434 597 SMART LRR_typ_2 407 429 IPR003591 -
Pste3g02434 597 SMART LRR_typ_2 206 229 IPR003591 -
Pste3g02434 597 SMART LRR_typ_2 45 66 IPR003591 -
Pste3g02434 597 SMART LRR_typ_2 501 523 IPR003591 -
Pste3g02434 597 SMART LRR_typ_2 90 113 IPR003591 -
Pste3g02434 597 SMART LRR_typ_2 477 500 IPR003591 -
Pste3g02434 597 SMART LRR_typ_2 453 476 IPR003591 -
Pste3g02434 597 SMART LRR_typ_2 430 452 IPR003591 -
Pste3g02434 597 SMART LRR_typ_2 261 284 IPR003591 -
Pste3g02434 597 SMART LRR_typ_2 114 136 IPR003591 -
Pste3g02434 597 SMART LRR_typ_2 306 329 IPR003591 -
Pste3g02434 597 SMART LRR_typ_2 547 570 IPR003591 -
Pste3g02434 597 SMART LRR_typ_2 67 88 IPR003591 -
Pste3g02434 597 SMART LRR_typ_2 524 546 IPR003591 -
Pste3g02434 597 Pfam Leucine rich repeat 263 319 IPR001611 GO:0005515
Pste3g02434 597 Pfam Leucine rich repeat 188 240 IPR001611 GO:0005515
Pste3g02434 597 Pfam Leucine rich repeat 502 560 IPR001611 GO:0005515
Pste3g02434 597 Pfam Leucine rich repeat 46 103 IPR001611 GO:0005515
Pste3g02434 597 SUPERFAMILY L domain-like 41 324 - -
Pste3g02434 597 ProSiteProfiles Leucine-rich repeat profile. 549 570 IPR001611 GO:0005515
Pste3g02434 597 ProSiteProfiles Leucine-rich repeat profile. 526 548 IPR001611 GO:0005515
Pste3g02434 597 FunFam GH01279p 330 573 - -
Pste3g02434 597 PANTHER - 14 172 - -
Pste3g02434 597 Gene3D Ribonuclease Inhibitor 245 337 IPR032675 -
Pste3g02434 597 Gene3D Ribonuclease Inhibitor 493 576 IPR032675 -
Pste3g02434 597 Pfam BspA type Leucine rich repeat region (6 copies) 427 498 IPR026906 -
Pste3g02434 597 SMART LRR_bac_2 159 178 - -
Pste3g02434 597 SMART LRR_bac_2 524 543 - -
Pste3g02434 597 SMART LRR_bac_2 283 303 - -
Pste3g02434 597 SMART LRR_bac_2 406 425 - -
Pste3g02434 597 SMART LRR_bac_2 547 567 - -
Pste3g02434 597 SMART LRR_bac_2 67 86 - -
Pste3g02434 597 SMART LRR_bac_2 113 132 - -
Pste3g02434 597 SMART LRR_bac_2 90 109 - -
Pste3g02434 597 ProSiteProfiles Leucine-rich repeat profile. 431 452 IPR001611 GO:0005515
Pste3g02434 597 Gene3D Ribonuclease Inhibitor 338 492 IPR032675 -
Pste3g02434 597 PRINTS Leucine-rich repeat signature 524 537 - -
Pste3g02434 597 PRINTS Leucine-rich repeat signature 286 299 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02434 112 570 Receptor kinase-like Gene Family AT4G08850 26.695 7.12e-15 76.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g02434 3 17197848 17207533 Pste3g02434 3 17197848 17207533 ECH