Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02373 ATGGCACTGAACTCCATGGCTGGTTCTCATTCCCATTTCTCACGTGACTCAGACGAGCATCCGCCTCGTACACGTCAATCTGCATCAAAAGTGTGTCGAGTTTGTAGTGATGAGATTGGATATGGGGCAGATGGGAAGCTATTTGTGGCTTGTCATGTGTGTGGTTTTCCCGTTTGTCGACCCTGCTATGAGTATGAGAGGAGTGAAGGGAACCAGTGTTGCCCTCAATGCGACACTCGCTATAAGCGTCACAAAGGTTGTCCTAGAGTAGCTGGTGATGATGAGGAGCATTCTGAAGCTGATGATTTTCATGATGATCCAGACGAGAAACATGATGATAATCATTTGGAAAATAAGAACCACAAGGAGCATCAGTGGCATCCCAATGGTCAAGCTTTCTCTTCAACCGGAAGTGTTGTCGATAAAGAATTTGAAGGGGAGAAAGAATTTTTCAATAATGGAGAATGGGAAGAGAGATTAGAGGAATGGAAAGCCAGGCAAGAAAAGAGAGGTCTTCTAAACAAAGAGGAAGGACAAGAGGACCAAGTTGAAGATGACTACCTTTTGGCTGAGGCAAGGCAACCGTTATGGCGTAAGGTCCCAATATCTTCAAGCCTAATAAACCCATATCGCATAGTCATAATCATGAGGCTCGTTATCCTAGTTTTCTTCCTCCGTTTCCGTATCTTAACTCCAGCATACGATGCATATCCATTGTGGCTAACCTCTGTGATATGTGAAATATGGTTTGCACTATCATGGATACTTGACCAGTTCCCCAAATGGTTCCCCATCACTCGTGAAACTTACTTGGATCGCCTGTCCATAAGGTTTGAGCGTGAAGGGGAGCCAAATCTTCTAGCCCCGGTTGATGTCTACGTGAGTACTGTGGACCCTTTGAAGGAACCTCCCATTATAACAGCAAATACTGTTCTTTCAATCCTGGCTGTTGACTACCCGGTTGAGAAAGTGTGCTGTTATGTATCTGATGATGGTGCATCTATGCTTTTGTTTGATACACTGTCAGAAACTTCTGAGTTTGCAAGAAGATGGGTTCCTTTTTGCAAGAAGTATAGCATTGAACCAAGGGCACCCGAGTTCTATTTTTCTCACAAGATTGATTACTTGAAAGATAAGGTGCATCCCACATTTGTGAAGGAACGGAGGGCCATGAAGAGAGAATATGAAGAATTTAAAGTGAAAATTAATGCCTTAGTGGCAAAAGCTCTGAAGAAACCAGAGGAGGGGTGGGTAATGCAAGATGGCACCCCTTGGCCTGGGAACAACACTCGTGATCATCCAGGGATGATTCAGGTATATCTAGGAAGTGGAGGTGCATTGGACTTAGAAGGCAAGGAACTACCACGGCTTGTGTATATTTCACGTGAAAAGCGTCCTGGCTATAACCACCACAAGAAAGCTGGTGCTATGAACTCTTTGGTTCGAGTTTCTGCTGTGCTTTCAAATGCACCTTTCATGTTGAATCTGGATTGTGACCATTACATCAACAATAGCAAGGCTATAAGAGAGGCTATGTGCTTTTTGATGGACCCCCAGCTAGGGAAGAAGCTCTGTTATGTCCAATTTCCACAAAGATTCGATGGTATTGATCGGCATGATAGATATGCTAATCGTAACATTGTGTTCTTTGATATCAATATGAAAGCCCTTGATGGGATTCAAGGTCCAGTTTATGTTGGTACTGGATGTGTGTTCAATAGGCAGGCATTATATGGATATGATCCACCAGTATCTGAGAAAAGGCCAAAAATGACTTGTGACTGCTGGCCCTCATGGTGTTGCTGTTGTTGTGGTGGTTCAAGGAAATCCAAGCCAAAGAAGAAATCAGGAGGAGGGGGTCTGTTTAGTAGATTTTACAGCAAGAAGAAGAAAATGATGGGGAAGAATTATGTTAGGAAAGGGTCTGAGCCGTTGTTTGATCTTGAAGAGATTGAAGAAGGTCTTGAAGGCTATGATGAGCTAGAGAAATCATCCCTCATGTCCCAGAATCAATGTGAGAAACGATTTGGGCAATCACCAGTTTTCATTGCTTCCACTTTGATGGAAAATGGTGGACTTCCTGAAGGCACCAATTCCCAATCACTAATTAAGGAAGCTATTCATGTTATAAGTTGTGGCTATGAAGAAAAGACTGAATGGGGTAAAGAGATTGGATGGATTTATGGCTCAGTAACAGAAGATATCTTAACGGGATTTAAAATGCATTGTAGAGGATGGAAATCAGTATACTGCATGCCAAAGAGACCAGCTTTCAAGGGATCTGCACCAATAAATCTATCGGATAGGTTACACCAAGTTCTGAGATGGGCTCTCGGTTCTGTTGAAATTTTCCTTAGTCGCCATTGCCCATTGTGGTATGGCTATGGAGGAAAACTGAAATGGCTAGAGAGGTTGGCTTATACTAACACCATTGTTTATCCATTCACTTCCATCCCTCTCCTTGCCTACTGCACAATTCCAGCAGTGTGCCTTCTTACTGGAAAATTCATCATTCCCACTTTGACCAACCTTGCTAGTGTATGGTTCATGGCTCTATTCATCTCCATCATTTTAACTAGTGTCCTTGAGCTAAGGTGGAGTGGGGTTAGCATTGAAGACTTGTGGCGCAATGAACAATTTTGGGTCATTGGAGGTGTTTCTGCACACCTTTTTGCTGTATTCCAAGGTCTCCTTAAGGTTCTTGGAGGAGTAGACACCAATTTCACTGTCACAGCCAAAGCAGCAGATGATACTGAATTTGGAGAGCTGTATCTGTTCAAGTGGACAACTCTTCTCATCCCACCAACTACTCTTATAATCCTGAATATGGTGGCAGTTGTGGCTGGAGTCTCTGATGCCATTAACAATGGCTATGGTTCATGGGGTCCTTTGTTTGGGAAGCTGTTTTTTGCCTTTTGGGTCATTGTCCACCTATATCCTTTCCTCAAAGGTCTTATGGGAAGGCAAAACAGGACTCCTACTATTGTTGTCCTCTGGTCAATTCTTCTAGCATCAATTTTCTCTTTGATTTGGGTCAGGATTGATCCTTTCTTGCCCAAGCAAACTGGTCCAGTACTCAAACAATGTGGAGTAGAATGCTAAGGTGTGTGCAATGTTTTCCGAATTCACCAAGGCAGTTATCATGTATACTTTTTTACCTTTTTGGTGCTCTTCAGGTTAGCACTTGATATTCACCATGCACAAGTTTAGGGAAGCTACTTTAGTTGAGTAGATTAAGAATACTTAATTCACTATCTAGAGTACACTCAGGAATATAAAAAACTCATGTAT 3291 0.4269 MALNSMAGSHSHFSRDSDEHPPRTRQSASKVCRVCSDEIGYGADGKLFVACHVCGFPVCRPCYEYERSEGNQCCPQCDTRYKRHKGCPRVAGDDEEHSEADDFHDDPDEKHDDNHLENKNHKEHQWHPNGQAFSSTGSVVDKEFEGEKEFFNNGEWEERLEEWKARQEKRGLLNKEEGQEDQVEDDYLLAEARQPLWRKVPISSSLINPYRIVIIMRLVILVFFLRFRILTPAYDAYPLWLTSVICEIWFALSWILDQFPKWFPITRETYLDRLSIRFEREGEPNLLAPVDVYVSTVDPLKEPPIITANTVLSILAVDYPVEKVCCYVSDDGASMLLFDTLSETSEFARRWVPFCKKYSIEPRAPEFYFSHKIDYLKDKVHPTFVKERRAMKREYEEFKVKINALVAKALKKPEEGWVMQDGTPWPGNNTRDHPGMIQVYLGSGGALDLEGKELPRLVYISREKRPGYNHHKKAGAMNSLVRVSAVLSNAPFMLNLDCDHYINNSKAIREAMCFLMDPQLGKKLCYVQFPQRFDGIDRHDRYANRNIVFFDINMKALDGIQGPVYVGTGCVFNRQALYGYDPPVSEKRPKMTCDCWPSWCCCCCGGSRKSKPKKKSGGGGLFSRFYSKKKKMMGKNYVRKGSEPLFDLEEIEEGLEGYDELEKSSLMSQNQCEKRFGQSPVFIASTLMENGGLPEGTNSQSLIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWKSVYCMPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYGYGGKLKWLERLAYTNTIVYPFTSIPLLAYCTIPAVCLLTGKFIIPTLTNLASVWFMALFISIILTSVLELRWSGVSIEDLWRNEQFWVIGGVSAHLFAVFQGLLKVLGGVDTNFTVTAKAADDTEFGELYLFKWTTLLIPPTTLIILNMVAVVAGVSDAINNGYGSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVLWSILLASIFSLIWVRIDPFLPKQTGPVLKQCGVEC 1033
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02373 1033 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 193 1000 - -
Pste3g02373 1033 MobiDBLite consensus disorder prediction 88 126 - -
Pste3g02373 1033 FunFam Cellulose synthase 407 581 - -
Pste3g02373 1033 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 402 582 IPR029044 -
Pste3g02373 1033 SUPERFAMILY RING/U-box 16 102 - -
Pste3g02373 1033 CDD mRING-HC-C4C4_CesA 30 80 - -
Pste3g02373 1033 FunFam Cellulose synthase 15 106 - -
Pste3g02373 1033 Pfam Cellulose synthase 290 1026 IPR005150 GO:0016020|GO:0016760|GO:0030244
Pste3g02373 1033 MobiDBLite consensus disorder prediction 88 132 - -
Pste3g02373 1033 SUPERFAMILY Nucleotide-diphospho-sugar transferases 303 837 IPR029044 -
Pste3g02373 1033 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 14 106 IPR013083 -
Pste3g02373 1033 MobiDBLite consensus disorder prediction 1 25 - -
Pste3g02373 1033 Pfam Zinc-binding RING-finger 25 97 IPR027934 -
Pste3g02373 1033 Coils Coil 388 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02373 Pste-Chr3 16832611 16837990 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02373 30 1033 Glycosyltransferase AT5G05170 65.323 0.0 1412
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g02373 3 16832611 16837990 Pste3g02373 3 16832611 16837990 ECH