Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02297 ATGCTGCAGATTTTCCAGCCCTGGATACAAAGGAGGAAACTTGCTTATATTAAGCACAAGCATGTAATCTTAGGATTTTTGACACATTTGAAAGAACGTTCATTAGGAAAACTGCTGACAGATACCGGTGAACCTGACAAAGAAGTCGTTAGAAAATTGTTTACAACCATTGATGAAGATGAAGATGGCAGTCTCACTCATAATGAATTGAGAGCACTGGTTATTGGTATTGAGTTTGGGGAGATTGACCTGGATCATGATGATGCTGTAAAAAGCATCATGAGTGATTTTGACACTTCTGGTAATCAACTCGTTGATCAAGATGAATTTGTTAATGGTGTTTGTAGATGGCTGCAAAGGGCCCAGCGTGCCCGAGTTAGATCTGGTGATGCTGGTTCGCACACAATGAGGTTTTTAAGTGACTTTCACACAGAAACAAAGAGGGAACATGATCTGTTGGATGTGGGAGAGCATAGTAATGAAGAGGCTGCGGGAATTGAGAATGCTAAATTGACTTCCATTAAAGCTGTTATGCTTCTGATACTGGGTACTATTATTGCTGCTGCATTTGCTGATCCTCTGGTTGATGCAGTGCATAACTTTTCTGAGGCTACAAGTATTCCTGCTTTCTTCATTTCCTTCATTGCTCTGCCTTTAGCAACCAATTCAAGTGAAGCAGTGTCAGCAATAATTTTTGCAAGTCGTGATAAGAGGCAAACTGCCTCTTTAACTTTTTCTGAGCTATATGGTGCAGTGACAATGAATAACGTGCTTTGCCTATCAGTTTTCTTGGCCCTTGTTTATGTGAGGGGATTGACATGGAACTTCTCTTCAGAAGTGTTGGTTATTCTCGTTGTTTGCTTTGTCGTGGGTGCGTTTGCCAGCTTCCGCACTGTGTTCCCTCTATGGACATCTATACTGGCTATCCTACTTTATCCCTTCTCCCTGGCATTGGTGTATGTTCTTGATTATTTCTTTGGTTGGTCGTAGACCAAATAATGTTTCATATATTACTGCCATGTTTGTCTCTTACCCCTGTTGCGGTGCATGACTTCAATGTATGGTGGAATTGGCATTGATTTAGAACAGTTGAGTGGTTTCAGTTTTCACTATTCCACTTATTATGAGTGCAATAAGACAATATATAGAACGGATAAAAATTATGTTACGAAGTTCGTGGTGAAGCCACCGTATGTGATTGTTTTGATTTCTCATAATCCACAAATATGATAAAAATTATCGTACCAATTTTAAATTCTGATAAAAATCAAATGCTTAAATTTCAT 1286 0.3919 MLQIFQPWIQRRKLAYIKHKHVILGFLTHLKERSLGKLLTDTGEPDKEVVRKLFTTIDEDEDGSLTHNELRALVIGIEFGEIDLDHDDAVKSIMSDFDTSGNQLVDQDEFVNGVCRWLQRAQRARVRSGDAGSHTMRFLSDFHTETKREHDLLDVGEHSNEEAAGIENAKLTSIKAVMLLILGTIIAAAFADPLVDAVHNFSEATSIPAFFISFIALPLATNSSEAVSAIIFASRDKRQTASLTFSELYGAVTMNNVLCLSVFLALVYVRGLTWNFSSEVLVILVVCFVVGAFASFRTVFPLWTSILAILLYPFSLALVYVLDYFFGWS 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02297 329 ProSitePatterns EF-hand calcium-binding domain. 98 110 IPR018247 -
Pste3g02297 329 Gene3D - 28 145 - -
Pste3g02297 329 FunFam Sodium/calcium exchanger NCL2 165 322 - -
Pste3g02297 329 SMART efh_1 49 77 IPR002048 GO:0005509
Pste3g02297 329 SMART efh_1 89 117 IPR002048 GO:0005509
Pste3g02297 329 Pfam Sodium/calcium exchanger protein 176 320 IPR004837 GO:0016020|GO:0055085
Pste3g02297 329 FunFam Sodium/calcium exchanger family protein / calcium-binding EF hand family protein 22 144 - -
Pste3g02297 329 CDD EFh 50 114 IPR002048 GO:0005509
Pste3g02297 329 ProSiteProfiles EF-hand calcium-binding domain profile. 85 120 IPR002048 GO:0005509
Pste3g02297 329 ProSitePatterns EF-hand calcium-binding domain. 58 70 IPR018247 -
Pste3g02297 329 ProSiteProfiles EF-hand calcium-binding domain profile. 45 80 IPR002048 GO:0005509
Pste3g02297 329 SUPERFAMILY EF-hand 44 118 IPR011992 -
Pste3g02297 329 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 130 321 IPR004713 GO:0006812|GO:0008324|GO:0016020
Pste3g02297 329 Pfam EF-hand domain pair 48 112 IPR002048 GO:0005509
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02297 3 329 EF-hand Containing Proteins AT1G53210 65.046 1.03e-145 421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g02297 3 16174359 16176342 Pste3g02297 3 16174359 16176342 ECH