Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02260 ATGGCTTCTTTCCCTAAACCCAAAACTTCTCTTCTTACCTCATTATTGTTCTTGTCTTTCACCATCATAGCTCATGCTGTTGTTCCTCAAAATGAGACCTTCAAATTTGAGAACTCAGGTGAACTTGGACCTTTCATTGTTGAGTATGGTGGTAATTACAGAATGATAGGCATCTTCAACTCTCCTTTCCAAGTCGGTTTCTACAACACCACCCCAAATGCCTTCACTCTAGCTTTGCGTGTGGGACTCCAACGCTCGGAGGCTCTATTTAGATGGGTTTGGGAGGCCAATAGAGGCAACCCAGTTGGAGAAAATGCCACTTTTTCACTTGGCACTGATGGGAACCTTGTGTTGGCTGATGCTGATGGTAGAATTGCTTGGCAAACCAACACTGCCAACAAGGGTGTTGTGGCCTTCAGGTTGCTTCCAAATGGCAACATGGTCCTCCTTGATGCTCAAGGAAAGTTCGTTTGGCAAAGTTTTGATTATCCCACTGATACCCTTTTGGTTGGTCAGTCTCTTAGAGCAAAAGGGACATCCAAATTGGTTAGCAGGCTCTCTGAGAAGCAAAATGTAGACGGGCCTTATAGTTTGGTGCTGGAGCCTAAAGGGTTGGCCTTGTACTACAAGAGCAAGAATTCCCCAAGACCAATTCTCTATTGGTTTTCAACAGATTGGTTCTCCTTTGGAAAAGGCTCCTTGCAAAATGTCACTCTCACATCTGATCCAGAGAGTTTTGAAATTGCAATTGATTACTTTGTGGATGCTTCCACCGGTGGCAACAGAATCCTTGGCAGGCCAGTGAACAATAGCACTATAACATATCTTAGGCTTGGAATTGATGGCAACATTAGGTTCGAGACTTACTTCATGGATGTGCGTGATGGTGTTTGGCAAGTAACCTACACTCTATTTGATAGAGATTCTGATGTAAGTGAGTGCCAATTGCCTGAGAGATGTGGGAAATTTGGGTTATGTGAAGATAACCAATGTGTGGCTTGCCCATTGGAAAATGGCCTATTTGGATGGAGCAACAATTGCACTGCCAAGCCTGTGACATCATGCAAGGCAAGTGATTTCCACTACTACAAACTTGAAGGAGTTGAGCATTACATGAGCACATACACCACAGGGGATAGAGTGAGTGAGAGTACTTGTGCAAACAAATGCACCAAGGATTGCAAGTGTGTGGGCTATTTCTACCACAGAGACAACTCAAGGTGTTGGGTAGCTTATGATCTGCAAACACTTACTAGAGTGGCTAATGCCTCACATGTGGGTGATTATAATGCTGTGAATGAAAACTACGTATACATAGCAGATATAGCAGAAATGCAGATTATTTACGTATCTGAGGTTGATGGTTTAAGAGAGATGGAACAATTTCGTTATCAATTTTGCAAAGGTTACGGTGGGGCCATAGAATTTCAAATTCAAAACGGAACTTACCAACACAATAGTCAATAG 1467 0.4301 MASFPKPKTSLLTSLLFLSFTIIAHAVVPQNETFKFENSGELGPFIVEYGGNYRMIGIFNSPFQVGFYNTTPNAFTLALRVGLQRSEALFRWVWEANRGNPVGENATFSLGTDGNLVLADADGRIAWQTNTANKGVVAFRLLPNGNMVLLDAQGKFVWQSFDYPTDTLLVGQSLRAKGTSKLVSRLSEKQNVDGPYSLVLEPKGLALYYKSKNSPRPILYWFSTDWFSFGKGSLQNVTLTSDPESFEIAIDYFVDASTGGNRILGRPVNNSTITYLRLGIDGNIRFETYFMDVRDGVWQVTYTLFDRDSDVSECQLPERCGKFGLCEDNQCVACPLENGLFGWSNNCTAKPVTSCKASDFHYYKLEGVEHYMSTYTTGDRVSESTCANKCTKDCKCVGYFYHRDNSRCWVAYDLQTLTRVANASHVGDYNAVNENYVYIADIAEMQIIYVSEVDGLREMEQFRYQFCKGYGGAIEFQIQNGTYQHNSQ 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02260 488 ProSiteProfiles Bulb-type lectin domain profile. 31 162 IPR001480 -
Pste3g02260 488 SUPERFAMILY alpha-D-mannose-specific plant lectins 89 225 IPR036426 -
Pste3g02260 488 ProSiteProfiles PAN/Apple domain profile. 355 434 IPR003609 -
Pste3g02260 488 SMART blect_4 47 164 IPR001480 -
Pste3g02260 488 Gene3D - 43 162 IPR036426 -
Pste3g02260 488 PIRSF SLG 1 440 IPR035446 -
Pste3g02260 488 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 28 416 - -
Pste3g02260 488 CDD B_lectin 47 164 IPR001480 -
Pste3g02260 488 FunFam Os04g0303100 protein 83 217 - -
Pste3g02260 488 Pfam D-mannose binding lectin 93 186 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02260 Pste-Chr3 15833602 15835418 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g02260 3 15833602 15835418 Pste3g02260 3 15833602 15835418 ECH