Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02256 AAAATAATTAAGTGTAAATTCTACTGTTGTAGCACTCCTCTTTGATTAAGTGTGTGTGTCCCCACTGGAGATTAGAGAAGGAGGAGGGAGAGATAAGGGAAGGAAACTCCGCAAACCCAACACCGTTACTGCTCTCTCCCAATGGCTACTTCCATTAACAGGTTTCTCCATCTCTCACTCTCTCTGTTATGAATTGCTCTTTCCCAATTTAACACGGGAATTTCTCGTTTCAAGCTCTGCTCTGGGCTGCAAATATTCTTCATTGTTCGTACAATCTAATGCCTTCAACGTGTCTTCTCCTCCTTTCAAACCAAAACTCACTCGCTCTAAGTTTTCCCCCACTTGCTCCGCCGCCGCCTCTTCTTCTGATCCACTTTTGGTTAAGGCTGCCAGGGGAGATCCTGTTGGTCGTCCTCCTGCATGGATGATGCGACAGGCAGGAAGGTACATGGCTGTTTACAGAAAGCTTGCTGAGAAACATCCATCCTTCCGTGAGAGGTCAGAGACAACTGATCTCATTGTGGAAATTTCTTTGCAGCCTTGGAAAGCTTTCAGGCCGGATGGAGTCATTATCTTCTCGGACATCCTTACACCACTTCCTGCATTTGGAGTTGATTTTGACATAGAAGAAGTAAGGGGGCCTGTTATACACTCACCCATTCGTTCTGAGGAGGATTTGAAGGCTTTGCATCCAATCGACCTGGACAGGCTTGGATTTGTTGGAGAATCACTTAAGATACTGTGCCAAGAGGTTGGTGATCATGCAGCTGTTTTGGGTTTTGTTGGAGCACCTTGGACAATTGCAACATATATTGTGGAAGGGGGTACAACACGCACATATACGACCATTAAGAGCATGTGTCACACTGCTCCCCGTGTATTGAGGACTTTGCTTTCTCATTTGACACAGGCAATAGCTGATTATGTTATTTTCCAAGTGGAGTCTGGGGCTCACTGCATACAAATATTTGATTCATGGGGTGGACAACTACCACCTGAAATGTGGGAACGCTGGTCAAAGCCGTATATCAAAGAGATTGTAAATTTGGTAAAAAAAAAATGCCCCGAGGTACCAATTGTTCTCTATATAAATGGAAATGGTGGTCTTCTTGAGCGTATGAAAGACACCGGAGTTGACGTTATAGGGCTAGACTGGACAGTGGATATGGCAGATGGAAGAAGAAGATTGGGTAGTGGGATAGGTGTGCAGGGAAATGTGGACCCTGCCTACTTATTCTCCTCTTTTGCTGCTCTGACTGAAGAAATTGAGAGGGTTGTGAGGTGTGCGGGACCTAGACGGCACATCCTTAATCTCGGACATGGTGTTCTTGTTGGCACACCTGAAGAAGCTGTTGCACATTTCTTTGAGGTAGCTAGGAGCTTGCAGTTTGACACACTTTTTGAAAACAATACTGCCAAGACCCTAATCTAGTAGTAACTTAGGAACAAATGTCATTAGCGTTGCTAGTGTTTTACTTTGTCTCGGAGTTAGTTCAAGCCATTCTCCAAAGTAAGGGCGTAGGCTTAGTCCTTCCTTATTCTTATGCTGCTATGTGATGATCAAAGGTCTGAGGATTTGCACATTTCTGTACCGGCTAGCTAGATGAATTTCTGATTTTACATTCTGCTGTATTTATAACTGACTATGATAAATTGATTGAAGGATTCC 1669 0.4416 MMRQAGRYMAVYRKLAEKHPSFRERSETTDLIVEISLQPWKAFRPDGVIIFSDILTPLPAFGVDFDIEEVRGPVIHSPIRSEEDLKALHPIDLDRLGFVGESLKILCQEVGDHAAVLGFVGAPWTIATYIVEGGTTRTYTTIKSMCHTAPRVLRTLLSHLTQAIADYVIFQVESGAHCIQIFDSWGGQLPPEMWERWSKPYIKEIVNLVKKKCPEVPIVLYINGNGGLLERMKDTGVDVIGLDWTVDMADGRRRLGSGIGVQGNVDPAYLFSSFAALTEEIERVVRCAGPRRHILNLGHGVLVGTPEEAVAHFFEVARSLQFDTLFENNTAKTLI 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02256 335 FunFam Uroporphyrinogen decarboxylase 1 322 - -
Pste3g02256 335 PANTHER METHYLTETRAHYDROFOLATE:HOMOCYSTEINE METHYLTRANSFERASE RELATED 1 322 - -
Pste3g02256 335 Pfam Uroporphyrinogen decarboxylase (URO-D) 1 319 IPR000257 GO:0004853|GO:0006779
Pste3g02256 335 NCBIfam uroporphyrinogen decarboxylase 1 318 IPR006361 GO:0004853|GO:0006779
Pste3g02256 335 ProSitePatterns Uroporphyrinogen decarboxylase signature 2. 117 133 IPR000257 GO:0004853|GO:0006779
Pste3g02256 335 CDD URO-D 1 319 IPR006361 GO:0004853|GO:0006779
Pste3g02256 335 Gene3D - 1 322 IPR038071 -
Pste3g02256 335 SUPERFAMILY UROD/MetE-like 1 320 IPR038071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02256 Pste-Chr3 15821211 15824832 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g02256 3 15821211 15824832 Pste3g02256 3 15821211 15824832 ECH