Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02234 CCCAGACTAGTCTCACATGTACGTGCGAATCAAATCAGGAAAAAAAATAAAAAGGAAAAAAAAATAATGAGTGGCGCTTTTTTAAGCGTTTTCACATTCCCCACTCAAGCTTTCTTTTTCGTTCTTCTTTTCTCTTCCTTGCCTTTGTTTGGAACAGAGCAAGCTCCACCAATGGCGGGTTACAGAGCCGACGACGACTACGACTACCTCTTTAAGGTGGTCCTCATCGGAGACTCCGGCGTCGGCAAGTCCAACCTCCTTTCCCGCTTCACCAAGAATGAGTTCAACTTGGAGTCCAAGTCCACCATTGGCGTCGAGTTCGCCACTCGCACCTTGAACGTCGATTCCAAAGTCATCAAGGCCCAGATCTGGGACACCGCTGGCCAAGAAAGGTATCGTGCCATCACTAGTGCATATTATCGAGGCGCAGTTGGTGCTCTTCTCGTCTACGATGTCACTCGCCATGCGACATTTGAGAATGTTGACAGATGGCTGAAAGAATTGCGGAATCACACAGATGCCAACATTGTTGTGATGCTTGTGGGTAACAAATCAGACCTTCGTCACCTTGTAGCGGTGTCAACTGAGGATGGGAAGTCCTATGCTGAGAAAGAATCACTTTACTTCATGGAAACCTCAGCTCTGGAGGCTACTAATGTAGAGAATGCATTTGCTGAAGTTCTGACTCAAATCTACCGCATTGTTAGCAAGAAAGCAGTAGAGGGGGCTGAAAATGGAACTGCATCAGTTCCTGCCAAAGGAGAGAAAATTGATCTGAAAAATGATGTGTCTGCTTTGAAGAGAGTTGGTTGCTGCTCTAGCTGATATTGCAAACATAGTTCAATTGGTTGGTATCGGCTCTGTTGTACGTGTAATATTCTGAGAAATACGAACTAGAAGAAAAGTGAAATTTAATTTGTCATAGCATGGTAGACTTTGTGTAACCTAAAAAACTAAGTTTGGTGTTTCAATAGGAGCTGCTGGTGAAGCAAGTTGATTGCTGGTCTTGTTGTAGTGCTATTATTATTGTTATTATTGTTTTTGAAATGTTTTCACATGCAGAGGTTCAAGCTTGGAATTAATTGAAGCTATTGTTTCATTTAAGTTTTTGTGTAGTATTCTGTGGTTGTTATGATAGAATCACGTAAGTAATAGG 1156 0.4256 MSGAFLSVFTFPTQAFFFVLLFSSLPLFGTEQAPPMAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDANIVVMLVGNKSDLRHLVAVSTEDGKSYAEKESLYFMETSALEATNVENAFAEVLTQIYRIVSKKAVEGAENGTASVPAKGEKIDLKNDVSALKRVGCCSS 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02234 252 Pfam Ras family 50 210 IPR001806 GO:0003924|GO:0005525
Pste3g02234 252 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 44 214 IPR027417 -
Pste3g02234 252 ProSiteProfiles small GTPase Ras family profile. 37 252 IPR001806 GO:0003924|GO:0005525
Pste3g02234 252 PANTHER DRAB11-RELATED 42 234 - -
Pste3g02234 252 SMART ran_sub_2 54 244 - -
Pste3g02234 252 SMART rab_sub_5 49 212 - -
Pste3g02234 252 Gene3D - 41 250 IPR027417 -
Pste3g02234 252 SMART ras_sub_4 46 212 - -
Pste3g02234 252 PRINTS Transforming protein P21 ras signature 49 70 - -
Pste3g02234 252 PRINTS Transforming protein P21 ras signature 72 88 - -
Pste3g02234 252 PRINTS Transforming protein P21 ras signature 152 165 - -
Pste3g02234 252 PRINTS Transforming protein P21 ras signature 90 112 - -
Pste3g02234 252 PRINTS Transforming protein P21 ras signature 187 209 - -
Pste3g02234 252 ProSiteProfiles small GTPase Rho family profile. 42 213 - -
Pste3g02234 252 SMART rho_sub_3 51 208 IPR001806 GO:0003924|GO:0005525
Pste3g02234 252 ProSiteProfiles small GTPase Rab1 family profile. 44 250 - -
Pste3g02234 252 FunFam ras-related protein RABA1f 41 250 - -
Pste3g02234 252 CDD Rab11_like 46 210 - -
Pste3g02234 252 NCBIfam small GTP-binding protein domain 47 205 IPR005225 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02234 Pste-Chr3 15691959 15695403 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g02234 3 15691959 15695403 Pste3g02234 3 15691959 15695403 ECH