Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01979 ATGGATCCCTCTACTTCTCGTCCAGCTGTAGTCATCGATAATGGCTCCGGGTACCCTTTTCTCCATTCTCTTCTATTCATTATTATCTCTGTTTTCCTCCTACGTGGACACGACGTGTTTGTTCAAATGCCCCAATGTCGTTTTCTTAGTTTCCTGACTACAATGGATTCTCCGGAATTGGGTTTACCCGGAATTTGGAAAATGATGTTCTTTTGCAGGTATAGTAAGATGGGGTTCGCTGGTAACGTGGAGCCATGTTTTATTGTTCCGACAGTGGTTGCAATTAATGAGTCGTTTCTGAATCAATCGAGGACCTCTTCTAAAGGCAATTGGGTGGCCCAGCACAACGCCGGGGTTATGGCGGATCTCGATTTCTTCATTGGGGATGATGCACTTTCCAAGTCTCGATCTAGCAGCACTTATAATCTCAGTTACCCAATTCGGCATGGTCAGGTTGAGAATTGGGATGCCATGGAGCGCTTCTGGCAGCAGTGCATATTCAATTATTTGAGGTGTGATCCAGAGGATCACTATTTTCTCTTGACTGAGAGTCCATTGACTTCGCCTGAGAGTCGTGAGTATACCGGGGAAATCATGTTTGAGACTTTTAACGTTCCTGGACTTTACATTGCTGTGAATTCTGTGCTTGCTCTTGCAGCTGGTTACACAACATCTAAGTGTGAGATGACAGGAGTTGTAGTGGATGTTGGAGATGGGGCTGCTCATGTTGTACCAGTTGCAGACGGCTATGTTATTGGTAGTAGCATCAAATCAATTCCTATTTCAGGAAAGGATGTTACTCTTTTTGTGCAGCAGCTTATGCGGGAAAGAGGAGAGAATGTACCGCCAGAAGACTCTTTTGAAGTGGCAAGGAAAGTGAAGGAAATGTATTGTTACACCTCCTCAGACATTGTGAAGGAATTTAATAAGCATGACAAAGAACCAGCCAAGTATATCAAGCATTGGAGAGGCATTAAGCCAAAGACGGGGGCACCATATTCCTGTGATATTGGCTATGAACGTTTTCTTGGCCCTGAGATTTTCTTTAATCCTGAGATATATAGCAGTGACTTTACCACCCCTTTGCCAGTTGTAATAGACAAGTGCATTCAGTCTGCGCCAATTGATACAAGGAGATCATTATACAAGAATATAGTGTTGTCTGGAGGTTCAACCATGTTCAAGGATTTCCACAGGAGGTTGCAACGTGATATAAAAAAAATAGTGGATGCCCGTGTCCTTTTATCTGAAGCACGCTTGAATGGGGAGATAAAAGCTTGTCATACAAAGGCAGAATATGAGGAGTATGGAGCAAGCATTTGCCGTACAAATCCTGTTTTCAAGGGAATGTATTAAAGCAATGACAAATTAGTTTATGAAGGACGCAGTTACTTGATAAGAGAGTTGAATGAGTGTCTGGTTATTTTGATCTTCAATCCACTTCCTGGTCTTTCTTCCCACCTATATTCAGGGTGGCAGAAGTGAGTGTAAAATATGTATATTAAGAGAAAAATATGCATTTGTTTTTATTCCAGCAGTCTCTCTAGGCAGTCGGTTTCAGATGGTTAATACAGTTGCAGGCAGGTCCAGACGGTACTTGATGGATAGATAGAAACTGATCTTTCTGACAAAGCTGGCTGAGCTGAATTGCAACTTTTGGTGTTGAGCTTAGAGTTTGATGAAGTTCTGCATTTTTTTGTCATTAATTGTTGGGACTGATAATTCCATGAACTACCTTTTTAGCATTTTAGGTAGGAAGTTAAATTCATTATTATTGAATTGTAATAAGCACCAGTGCAGGTTAGATTTGTGTTTTAAGTGAATCATATATTTTTAAATTTTTGGGTACATAATGTACAATTTGTATTTTGTTTACTGATGATTAAAGCCAGAAATAATTCTTTTGTCAGGTTAACTACTCCTGACTTGTG 1931 0.4065 MDPSTSRPAVVIDNGSGYPFLHSLLFIIISVFLLRGHDVFVQMPQCRFLSFLTTMDSPELGLPGIWKMMFFCRYSKMGFAGNVEPCFIVPTVVAINESFLNQSRTSSKGNWVAQHNAGVMADLDFFIGDDALSKSRSSSTYNLSYPIRHGQVENWDAMERFWQQCIFNYLRCDPEDHYFLLTESPLTSPESREYTGEIMFETFNVPGLYIAVNSVLALAAGYTTSKCEMTGVVVDVGDGAAHVVPVADGYVIGSSIKSIPISGKDVTLFVQQLMRERGENVPPEDSFEVARKVKEMYCYTSSDIVKEFNKHDKEPAKYIKHWRGIKPKTGAPYSCDIGYERFLGPEIFFNPEIYSSDFTTPLPVVIDKCIQSAPIDTRRSLYKNIVLSGGSTMFKDFHRRLQRDIKKIVDARVLLSEARLNGEIKACHTKAEYEEYGASICRTNPVFKGMY 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01979 451 SMART actin_3 74 446 IPR004000 -
Pste3g01979 451 SUPERFAMILY Actin-like ATPase domain 229 446 IPR043129 -
Pste3g01979 451 SUPERFAMILY Actin-like ATPase domain 74 233 IPR043129 -
Pste3g01979 451 FunFam Actin-related protein 3 70 230 - -
Pste3g01979 451 Gene3D - 74 213 - -
Pste3g01979 451 CDD NBD_sugar-kinase_HSP70_actin 144 262 - -
Pste3g01979 451 Gene3D Actin; Chain A, domain 4 261 359 - -
Pste3g01979 451 PANTHER ACTIN 9 438 IPR004000 -
Pste3g01979 451 Pfam Actin 74 411 IPR004000 -
Pste3g01979 451 Gene3D - 214 414 - -
Pste3g01979 451 FunFam Actin-related protein 3 (ARP3) 261 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01979 Pste-Chr3 13497242 13502215 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01979 76 441 Miscellaneous Gene Families AT2G42100 33.420 1.17e-59 198
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g01979 3 13497242 13502215 Pste3g01979 3 13497242 13502215 ECH