Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01969 GTTGTTGCTCCGTGCAGTTATACTGATGGCATACGAAATGGGAGGGTGGTGTGCGCTAATAATAATATTGTTATTGGTATCAGGAAGCGTAGTTGAAGTTGAAGTTAAGGGAAAGGCAGAGGGTGTGAGACTTGAGACGGAATCTCGATGGATAGTGAACGAAGATGGGCAAAGGGTGAAGCTTGCATGTGTGAATTGGGTGTCCCATTTGGAAGCTGTCGTGGCTGAGGGACTGAGCAAACAGCCACTCGATGTGATTTCCAATGGAATAAAGTCAATGGGCTTCAACTGTGTTAGGCTCACCTGGCCTTTACTTCTCCTCACCAACCACTCTCTTGCTTCTCTCACCGTCAGACAATCCTTTCACAATCTTGCTCTCCTTCCATCCATTGCCGCTGTCCAAACCAACAACCCCTCCCTCATCGATCTTACCCTCATCCAAGCTTTTCAGGCAGTGGTGAAAAGTCTAGGGGACAATGACTTGATGGTGATATTGGACAACCACATAACCCAACCAGGTTGGTGCTGCAGTAACTCCGACGGCAATGGATTCTTCGGCGACAAATTCTTCGACCCAAATCTATGGATATTGGGCCTCACAAACATGGCCACACTTTTCAATGGGGTCTCTAATGTGGTGGGTATGAGCTTAAGGAATGAGCTCCGAGGGCCCAAACAGAATGTCCACGATTGGTACAAGTACATGGTTAAAGGGGCAGAAGCAATTCATGCAGCAAATCCAGATGTTCTTGTCATTCTATCTGGCCTTAATTTTGACAAAGATTTGTCGTTCATTCAAAAACAGCCAGTAAGCCTTACATTTAAGGGAAAATTAGTATTTGAAGCTCATTGGTATGCCTTTACAGATGGTCAAGCTTGGGTTAATGGAAACCCAAACCAAGTATGTGGACAAGTGACAGAAAATATGATGAGAACCTCTGGTTTTTTGGTGAACCAAGGATGGCCATTGTTTATTAGTGAGTTTGGTGTAGACTTGAGAGGTACCAACTTGAACGACAACCGCTACCTTAATTGCTTCATTGCAGTGGCAGCTGAGCTTGACTTGGATTGGGCATTGTGGACACTGGTTGGTAGCTACTACTTTAGACAAGGAGTTATTGGAATGGAAGAGTTTTATGGGATTCTTAGTTGGGACTGGACCCAACTTAGGAATACCACTTTCTTAGACAGAATCTCTGCCCTCCAACTTCCATTTCGAGGTCCAGGCATAACAAAAGGAAATCCATACAAATTGATATTCCATCCTCTTACCGGTCTGTGTGTCATAAGAAAGTCAGTACTAGACCCATTGACATTAGGTCCTTGCTATGTATCTGATGGCTGGAAATACACACCGCAGAAAATTCTATCGATAAAGGGTACTTACTTCTGCATACAAGCAGTGAATGAAGGCATGCCTGCAATACTTGGCATAATATGTTCAGATCCTAATTCTAGATGGGAAATGATTTCAGATTCGAAGTTGCACCTTTCATCTAAACTCAGTGACGGTTCTAGTGTATGCCTAGATGTAGATGACAACAACACCATTGTGACCAATGCTTGCAAGTGCTTGAGCAGAGATCGTACATGTGATCCTAGTAGCCAATGGTTCAAAATTATTGACAGCGGAAGGAGTGCGTCGATGCTATACAACACCAAAAATTCCAAAATCAACATAACACACAGTGTCATAGAGAATCTTATTTTAGGATGTGATAAAAGCAGGGATGAAACAAAGGCATATCCTGAGTCAAATACATATTGGTGGATTTTGGCGTGCAGAGTGATAAGGTGGTCGTTCCCGTTGGTATTGAGCTTTGTCTCGTTGCTAATCGGATTCTTCTCGGGACCCCGAATCCAACAAGATGAGGAGGCAGTGGGTGTTCTTAGTACAGATTCACGATGGATCGTGAACGAAGATGGGAAAAGAGTGAAGCTTGGGTGTGTGAATTGGGTGTCCCATTTAGAAGTTGCGGTGGCAGAAGGACTGAGCAAACAGCCAGTGGATGTGATTTCAAAGAGAATAAAGTCAATGGGCTTCAACTGTGTCAGGCTCACTTGGCCCACACTTTTGCTCACCAACAATTCGCTCGCTTCTCTCACCGTTAGACAATCCTTTCAGACTTTTGCTCTTCTTCAATCCGTTGCCGGTGTTCAAACCAACAATCCTTCCTTCATCGATCTTTCTCTTAATCAAACTTTTCAGGAAGTGGTGAGGAATCTGGAGAAGAACGAAGTGATGGTGATATTAGACAACCACGTGACCCAACCAGGATGGTGCTGCGGTAGCACGGACGGTAATGGGTTCTTTGGCGACAAATATTTTGACCCAAACCTCTGGATCCTGGGTCTCACTAACATGGCCACCCTTTTCAAAAAATATACTAACGTGGTGGGCATAAGCTTGAGAAATGAACTCCGAGGGCCTAAACAGAATGTTAATGATTGGTACAAGTAAGTCCTAACAACTTACAACTCCATCTAAAATTTTGCCACCAGCAACTGCCTTCTATTACAACACCAATCAATTTTCTTGTTCTAATATTTATTACTAAAGCTAGTTTAAAGACACAATTTAATTATATTTAATACTTCAAACTATAAATGTTACCGAAATCTATTTTATTAGGTTCGGCATTTCTCAACCTAACTCCAATTCACATAGTATTTCTATTTACATCCCCATTTCATATTAGCTTAAAAAATATCTACATAGTTGATATCATTGTGTGCTAATTGAATGATTACCTGTT 2756 0.4245 MAYEMGGWCALIIILLLVSGSVVEVEVKGKAEGVRLETESRWIVNEDGQRVKLACVNWVSHLEAVVAEGLSKQPLDVISNGIKSMGFNCVRLTWPLLLLTNHSLASLTVRQSFHNLALLPSIAAVQTNNPSLIDLTLIQAFQAVVKSLGDNDLMVILDNHITQPGWCCSNSDGNGFFGDKFFDPNLWILGLTNMATLFNGVSNVVGMSLRNELRGPKQNVHDWYKYMVKGAEAIHAANPDVLVILSGLNFDKDLSFIQKQPVSLTFKGKLVFEAHWYAFTDGQAWVNGNPNQVCGQVTENMMRTSGFLVNQGWPLFISEFGVDLRGTNLNDNRYLNCFIAVAAELDLDWALWTLVGSYYFRQGVIGMEEFYGILSWDWTQLRNTTFLDRISALQLPFRGPGITKGNPYKLIFHPLTGLCVIRKSVLDPLTLGPCYVSDGWKYTPQKILSIKGTYFCIQAVNEGMPAILGIICSDPNSRWEMISDSKLHLSSKLSDGSSVCLDVDDNNTIVTNACKCLSRDRTCDPSSQWFKIIDSGRSASMLYNTKNSKINITHSVIENLILGCDKSRDETKAYPESNTYWWILACRVIRWSFPLVLSFVSLLIGFFSGPRIQQDEEAVGVLSTDSRWIVNEDGKRVKLGCVNWVSHLEVAVAEGLSKQPVDVISKRIKSMGFNCVRLTWPTLLLTNNSLASLTVRQSFQTFALLQSVAGVQTNNPSFIDLSLNQTFQEVVRNLEKNEVMVILDNHVTQPGWCCGSTDGNGFFGDKYFDPNLWILGLTNMATLFKKYTNVVGISLRNELRGPKQNVNDWYK 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01969 811 Pfam Cellulase (glycosyl hydrolase family 5) 664 809 IPR001547 GO:0004553|GO:0071704
Pste3g01969 811 Pfam Cellulase (glycosyl hydrolase family 5) 75 354 IPR001547 GO:0004553|GO:0071704
Pste3g01969 811 SUPERFAMILY (Trans)glycosidases 36 385 IPR017853 -
Pste3g01969 811 SUPERFAMILY (Trans)glycosidases 619 810 IPR017853 -
Pste3g01969 811 Gene3D Glycosidases 34 393 - -
Pste3g01969 811 Gene3D Glycosidases 618 811 - -
Pste3g01969 811 PANTHER CELLULASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_5G14560) 30 536 - -
Pste3g01969 811 SUPERFAMILY Ricin B-like lectins 405 532 IPR035992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01969 Pste-Chr3 13410842 13417345 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01969 622 811 Glycoside Hydrolase AT1G13130 64.398 7.87e-79 263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g01969 3 13410842 13417345 Pste3g01969 3 13410842 13417345 ECH