Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01901 AAAGGTAACTCCCGTAAGTATAGTTGGGCGGCTAACGGGAAAACCCTAGGCGAAACTGAGCGGCGAAGACAGAGAGAAGAATGGGTGGTGGCGGGAGAGGGAGAGGAAGATCCCGCACTCAAAGAAAGCACTTCCGTGAGAGCAGAGAGAACGTATGGAAGCGTTCCAAATCGGATCCCAATCCTTCTTCAACTCAAACTAACAATACCACCTGGACTCCCTTCTCCACTCAGAACCCCGCTTTCGATTTCTACTACAAAGAGCAGGGGATTGTTGACCCCCAACAGTGGGACCACTTCGTCTCACTTCTCAGAACTCCATTGCCCGCTACCTTCAGAATCAACTCCAGTAGCCACTTCTCCGACGACATTCGTTCCCAATTGGAGAATGATTTCGTCCATTCTCTTCGCCACGAGATTGCTGAAGGAACCGAAACCGAGGCCATTCGCCCGTTGCTATGGTATCCTGGGAATTTCGCTTGGCATTCTAATTTTTCTAGGATGCAGCTCCGGAAGAACCAAACACTCGAGAGGTTCCATGAATTCTTAAAGTTAGAAAATGAGATTGGAAATATCACAAGACAAGAAGCTGTCAGTATGGTTCCCCCCCTCTTCTTGGATGTGCATTCAGATCATTTCGTGCTTGATATGTGTGCTGCACCAGGGTCAAAAACATTCCAATTGCTTGAGATTATACACCAATCAACTAAAGCAGGATTCCTACCTGATGGAATGGTTATAGCAAATGATCTTGATGTCCAGAGATGTAATCTTCTCATCCACCAAACAAAAAGAATGTGCACAGCCAATCTAATTGTTACAAATCATGAAGCGCAGCACTTCCCAGGATGCCGTTTAAACAGGAATTATGAAAGGATGGAGTTAGATAATGATATTGGCCAACTGTTATTTGATCGTGTTCTTTGTGATGTCCCATGCAGTGGAGATGGTACACTTCGAAAGGCACCTGATCTCTGGAGAAAATGGAACACAGGGATGGGACATGGTCTTCACAGCCTACAAGTTTTAATTGCTATGCGAGGTATATCTTTACTAAAAATTGGTGGAAGAATGGTTTATTCAACCTGCTCAATGAATCCTATTGAGAATGAAGCTGTTGTTGCTGAGGTTTTACGGAGGTGTGGAGGGTCTGTTAAACTTATTGATGTCTCTAGTGAACTTCCACAACTTATTCGTCGGCCAGGTCTCCGGAGATGGAAGGTATATGACAAAGGCACTTGGTTAGTCTCTTACAAGGATGTTCCCAAGTTTCGTAGAAGTGTAATTCTTCCCAGCATGTTTCCTTCTGGCAGAGGCCATCAGGATCTTGTTGATGCTTGTTGCAATGCTGATGTAGGGGATGATGCTACTGATGGTGTTAATGGAAATGCTAAAGATGCCATTCAAGCAGTAGAGAATCCTATGTTGCCTGAGTCTGCTGAGGAAGTTCCTGATTTCCCTATAGAGCATTGTATGAGGATAGTTCCCCATGATCAGAATACTGGAGCCTTCTTCATTGCTGTACTGCAAAAAGTTTCTCCTCTGCCAGAAATTCCAGAAAAAACTAAAATACATATTGAAGAGCAAAATGTAGAACCAGCAAACCAGAGTCTTAATGATGCACAAGAACCAGAGGCTAATTCACCAGAAATTGCACATGAAGAAGGCTTAAAAGCAGCTTCAGAGGGGAATGTAAATGACAATGAACAAAATACCGAAGATTTGGAAGCAAGTCCTGTTAGTTGTGAAGAACAGAATTCCAAGGAAACTCAAGAGCCCGAAAATGTACAAAAAATGGCCAAGAGAGTTCCAGGCAAAAGAAAGCTACAAATTCAAGGCAAATGGAGGGGTGTTGACCCTGTTGTGTTTTTCAAAGATGAAGCAATTGTTAATAGTATAAGGGATTTTTATGGGATCAATGAGCATTTTCCATTCAATGGTCATCTTGTTACGAGAAACAGTGATACGAGTCATGTGAAAAGAATTTATTATATCTCCAAGTCAGTCAAGGATGTTCTTGAGCTGAACTTCAAAGTTGGGCAGCAACTCAAAATAACATCAATTGGCCTGAAGATGTTTGAAAGACAAACAGCACGAGAAGGTAGCTCCGCACCTTGTGCTTTCCGGATATCATCTGAAGGATTGCCCCTCATTCTTCCATACATAACCAAACAGATTCTGCATGCATCTGCAGCAGATTTCAAGCATCTTCTGCAGAACAAAGAAGTAAAATTTGAAGATTTTACTGATGCCGAGTTTGGTGAAAAGGCTGCAAACCTATTGCCAGGCTGTTGTGTGGTAATTCTGGCTATAGGGAACACAATTGCTGCAGAGTCTCTCCAAGTGACTGAGTCAACGATAGCCATTGGATGCTGGAAGGGTCGGGCTAGATTGTCAGTGATGGTTACTGCAATGGACTGCCAAGAACTACTTGAAAGGCTTTTAATACGTTTGGACACTGAAAAGGGTTCCGCTGGGCATGTGGACAAATCCTCTAATGATGTGGAAGTACAGCCTGTGCAGGAGTTGGACAGTAAAAATGATGTGAAAGCTACTGTGAGTTAAACGTGACTACTTATCAAATATTCTTTACTCTGTTGCAACAGATAATTTAGGCTTATTTATCATTTACAGAAATGGTGATTTTGTCCTTCACCTATGAAATGTTAGAAAAAAATTTGTTGTTTTTGTTAACCTTGTTCTTTTCAAAGACGAGTTGGTCTAGATTTGTATCAATATTATCCTGTAGTTTTGGTTTCAGAAACGGCTCCCCTTCTGTTCAAACCTGCATATGAGATTTTGGAA 2804 0.4226 MGGGGRGRGRSRTQRKHFRESRENVWKRSKSDPNPSSTQTNNTTWTPFSTQNPAFDFYYKEQGIVDPQQWDHFVSLLRTPLPATFRINSSSHFSDDIRSQLENDFVHSLRHEIAEGTETEAIRPLLWYPGNFAWHSNFSRMQLRKNQTLERFHEFLKLENEIGNITRQEAVSMVPPLFLDVHSDHFVLDMCAAPGSKTFQLLEIIHQSTKAGFLPDGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRLNRNYERMELDNDIGQLLFDRVLCDVPCSGDGTLRKAPDLWRKWNTGMGHGLHSLQVLIAMRGISLLKIGGRMVYSTCSMNPIENEAVVAEVLRRCGGSVKLIDVSSELPQLIRRPGLRRWKVYDKGTWLVSYKDVPKFRRSVILPSMFPSGRGHQDLVDACCNADVGDDATDGVNGNAKDAIQAVENPMLPESAEEVPDFPIEHCMRIVPHDQNTGAFFIAVLQKVSPLPEIPEKTKIHIEEQNVEPANQSLNDAQEPEANSPEIAHEEGLKAASEGNVNDNEQNTEDLEASPVSCEEQNSKETQEPENVQKMAKRVPGKRKLQIQGKWRGVDPVVFFKDEAIVNSIRDFYGINEHFPFNGHLVTRNSDTSHVKRIYYISKSVKDVLELNFKVGQQLKITSIGLKMFERQTAREGSSAPCAFRISSEGLPLILPYITKQILHASAADFKHLLQNKEVKFEDFTDAEFGEKAANLLPGCCVVILAIGNTIAAESLQVTESTIAIGCWKGRARLSVMVTAMDCQELLERLLIRLDTEKGSAGHVDKSSNDVEVQPVQELDSKNDVKATVS 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01901 827 PRINTS RNA (C5-cytosine) methyltransferase NCL1 subfamily signature 134 155 IPR023270 GO:0016428
Pste3g01901 827 PRINTS RNA (C5-cytosine) methyltransferase NCL1 subfamily signature 362 381 IPR023270 GO:0016428
Pste3g01901 827 PRINTS RNA (C5-cytosine) methyltransferase NCL1 subfamily signature 656 668 IPR023270 GO:0016428
Pste3g01901 827 Gene3D Vaccinia Virus protein VP39 50 395 IPR029063 -
Pste3g01901 827 MobiDBLite consensus disorder prediction 560 574 - -
Pste3g01901 827 ProSiteProfiles SAM-dependent MTase RsmB/NOP-type domain profile. 73 485 IPR001678 GO:0008168
Pste3g01901 827 MobiDBLite consensus disorder prediction 807 827 - -
Pste3g01901 827 MobiDBLite consensus disorder prediction 534 576 - -
Pste3g01901 827 ProSitePatterns NOL1/NOP2/sun family signature. 277 288 IPR018314 GO:0003723|GO:0008168
Pste3g01901 827 Pfam 16S rRNA methyltransferase RsmB/F 178 354 IPR001678 GO:0008168
Pste3g01901 827 FunFam S-adenosyl-L-methionine-dependent methyltransferase superfamily protein 50 392 - -
Pste3g01901 827 MobiDBLite consensus disorder prediction 30 48 - -
Pste3g01901 827 MobiDBLite consensus disorder prediction 797 827 - -
Pste3g01901 827 MobiDBLite consensus disorder prediction 1 48 - -
Pste3g01901 827 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 55 485 IPR029063 -
Pste3g01901 827 PANTHER NCL1 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING 14 795 IPR023267 GO:0001510
Pste3g01901 827 PRINTS RNA (C5-cytosine) methyltransferase signature 278 290 IPR023267 GO:0001510
Pste3g01901 827 PRINTS RNA (C5-cytosine) methyltransferase signature 467 484 IPR023267 GO:0001510
Pste3g01901 827 PRINTS RNA (C5-cytosine) methyltransferase signature 328 344 IPR023267 GO:0001510
Pste3g01901 827 PRINTS RNA (C5-cytosine) methyltransferase signature 188 198 IPR023267 GO:0001510
Pste3g01901 827 MobiDBLite consensus disorder prediction 536 559 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01901 Pste-Chr3 12803516 12812261 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g01901 3 12803516 12812261 Pste3g01901 3 12803516 12812261 ECH
Pste3g01901 3 12803516 12812261 Pste7g02330 7 21895042 21907290 PCT