Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01604 GTCGATTTATATAGACGAAGAATACCAAAAAGGAATGCAGAAGGTGCTGAAAGGCCTATCCAGTTGTCCTTCCAAGATAGAAGCTCAAGATGCAACTTTTCTTTGTTGAAATTTAAACCTTTTGTCCTATTGTTAACCATTTGCGGCACTTATCTAACGCTTCTGTATTCTCCAAAGGTTTACATTAGCTACTATTTATCAAGCTCTGGCTCCGGGCCAAATTTTGTGAACAGGTGGATATGGGGTGTGTCAGATCCCCGGTACATATCGAATGTACATATAAACTGGGATGATATATTGCAAATTAGCGAGGAACTGACTGGAAAGGAAGAATTTCAAGGGGTTGGCCTTCTAAACTTCAATAAGACTGAATTAGACCATTGGGAACAGATTATTCCTGATGTCACACATATTGATCTGCAATTGGAGTATGCTGAAAAAAATGTGACATGGGAATCCCTATACCCGGAATGGATTGATGAGGAAGAAGAAACCCAAGTCCCGGCTTGTCCTTCTCTCCCAAGTCTTAGATCTCCTGGAATAAGACTCAATCTCATAGCTGTTAAGCTTCCTCATGCCAATGGGGAATTGTTGCACTTGCAACTAGCAGCAGCTAGGCTTGCCACCTCTTTCAAGGGCAACTACCCCGTCTATGTGCTTTTTGTTACCAACTTCTTTCCACCACCTAATTTGTTTACCTGCCAACAACTTGTGCGACATGAAGGGAATGTTTGGTTATACAATCCAAACTTGCATGTTTTAAAAGAAAAACTCCACCTCCCTTTAGGATCTTGTGAACTTGCACTTCCTTTGAGGAGCAAAGAGTTGAGCTACGAGGGAAATGTTCAAAGAGAAGCCTATGCAACAGTTCTCCATTCAGCTCACGTTTATGTTTGTGGAGCTATTGCAGCCGCACAAAGCATCCGCATGTCTGGATCAACTCGAGACCTGGTTATACTTGTTGATGAGACAATAAGTGAGTACTACAGAAGTGGTTTAGAAGCAGCAGGGTGGAAAATTAGAACAATACAAAGGATCCGAAACCCAAAAGCTGAAAAAAATGCTTACAATGAATGGAACTACAGCAAGTTCCGTTTATGGCAGCTTACAGATTATGACAAGATAATATTCATTGATGCAGATTTGCTCATCCTAAGAAATATAGATTTCCTATTTGGCATGCCAGAAATCACTGCAACTGGAAATAATGGAACTCTTTTCAACTCAGGTGTCATGGTGGTTGAGCCATCAAATTGCACATTCCAGCTCCTAATGAATCATATTAATGAGTTTGAGTCCTACAATGGAGGGGACCAGGGATATTTAAATGAAATATTTACATGGTGGCACAGGATACCAAGACACATGAACTTTTTGAAGCATTTTTGGATTGGTGATGAGGAAGAGAAAAAACAAACGAAGACCATGCTATTTGGTGCTGAGCCTCCTATTCTCTATGTCCTTCACTATCTAGGAATGAAGCCGTGGTTGTGTTTCCGGACTATGATTTTTGCAAGTGATGTGGCTCATGAAAGGTGGTGGAAGGTGCATGATGCAATGCCTGTGCATTTGCAACAGTTTTGCATGTTGAAGTCAAAGCAGAAGGCACAGTTGGAATGGGATCGTAGACAAGCTGAAATAGCAAACTACACTGATGGACATTGGAGAATTAAAGTTAAAGATAAGAGGTTGAAGAAATGTGTAGATAATTTGTGCTCATGGGAAAACATGTTGAAGCATTGGGGAGAGACCAATTGGACTGATGACGAGTCTTATACTCCAACACCACCTGCCATTGTCGCATCATCCCTTTCTGCTTTC 1821 0.4113 VDLYRRRIPKRNAEGAERPIQLSFQDRSSRCNFSLLKFKPFVLLLTICGTYLTLLYSPKVYISYYLSSSGSGPNFVNRWIWGVSDPRYISNVHINWDDILQISEELTGKEEFQGVGLLNFNKTELDHWEQIIPDVTHIDLQLEYAEKNVTWESLYPEWIDEEEETQVPACPSLPSLRSPGIRLNLIAVKLPHANGELLHLQLAAARLATSFKGNYPVYVLFVTNFFPPPNLFTCQQLVRHEGNVWLYNPNLHVLKEKLHLPLGSCELALPLRSKELSYEGNVQREAYATVLHSAHVYVCGAIAAAQSIRMSGSTRDLVILVDETISEYYRSGLEAAGWKIRTIQRIRNPKAEKNAYNEWNYSKFRLWQLTDYDKIIFIDADLLILRNIDFLFGMPEITATGNNGTLFNSGVMVVEPSNCTFQLLMNHINEFESYNGGDQGYLNEIFTWWHRIPRHMNFLKHFWIGDEEEKKQTKTMLFGAEPPILYVLHYLGMKPWLCFRTMIFASDVAHERWWKVHDAMPVHLQQFCMLKSKQKAQLEWDRRQAEIANYTDGHWRIKVKDKRLKKCVDNLCSWENMLKHWGETNWTDDESYTPTPPAIVASSLSAF 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01604 607 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 281 522 IPR029044 -
Pste3g01604 607 PANTHER GLYCOGENIN SUBFAMILY MEMBER 198 567 - -
Pste3g01604 607 FunFam Hexosyltransferase 282 524 - -
Pste3g01604 607 Pfam Glycosyl transferase family 8 290 394 IPR002495 GO:0016757
Pste3g01604 607 SUPERFAMILY Nucleotide-diphospho-sugar transferases 285 523 IPR029044 -
Pste3g01604 607 CDD GT8_Glycogenin 285 520 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01604 Pste-Chr3 10093855 10096209 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01604 6 607 Glycosyltransferase AT3G18660 60.726 0.0 774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g01604 3 10093855 10096209 Pste3g01604 3 10093855 10096209 ECH
Pste2g03710 2 40857604 40860360 Pste3g01604 3 10093855 10096209 ECH
Pste3g01604 3 10093855 10096209 Pste2g03710 2 40857604 40860360 PCT