Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01504 GTTCCAGTTCCAGTTCCAGTTCCATCCTCTCTTCTCAATTCTCATCATATCCATTGCCAAATTTTCTTTCATGGGGTCGTGATATTCTTTTCAGCCCAAACTTGATCGTTGATGCTTCATGAGGAAGAAAGGAACTAAAAGCCAAAGCATGAGAAGCAATCCCACTTCCAATGCAGAGGTTTTTCTGTCCTTTCCCTCCTTCCAAAGACCAAACCCATTCCCATAAACTAACACCTAAGACACAAGCAAAAGCAATACCCATGAATCCTGTTCTTCTTGGACAAGAATAAAATCAAACCTTTCTACAACAATTAACTCTTTCCATTTAAACACAACCCCACCACTCTTCAAACTCTTTCATCTCATTAAAAATCAATAATTCTCATTTAAACCCAAGCCAAGCCCATCACTATTCAAATTTTTTCATCCATACATTTCAAAATAAATAAATAATAAAGAAAAGTCTTTGGTTGCATTACAAAGACAGGAAAGGGAAAAAAATGATGGGGAAAGTGGTGATGGTGTTTGCAGTGATGGTGTTGCTCAACGTGTCTTCCTGTTCCGCGTGGTTCGGTAATACACACAAAAATGGAAGGAATTCAATTCTTCCAAGTGAAACCACATCAGCATGGCCAAGGCTATCGAACCCTGTTGGCTCCTCTATCGTGTTCCCTCTTTATGGCAATGTTTATCCTGTAGGGTTCTATAATGTTACTCTCAATATTGGTCAGCCAGCAAGGCCTTATTTTCTTGATGTGGACACGGGTAGTGACCTCACATGGCTCCAATGTGATGCCCCTTGTACCCATTGCTCTGAGACACCCCATCCACTCTACAGGCCCAGCAATGACTTTGTACCCTGCAGGGATCCCCTTTGTGCATCCTTGCAGCCCACTGAGGACTACAACTGTGAACACCCTGACCAATGTGACTATGAAATTAATTATGCAGATCAGTACTCAACCTTCGGTGTACTTCTCAATGATGTTTATCTTCTCAATTTTACCAACGGAGTCCAACTTAAAGTTCGGATGGCACTTGGATGTGGATATGATCAAGTATTTTCACCTTCTTCTTACCATCCCTTAGATGGAATACTTGGCCTTGGAAGAGGAAAGGCCAGCTTGATATCCCAGCTGCATAGTCAGGGCTTGGTGCGAAATGTGATTGGACACTGTTTAAGTTCACTAGGAGGAGGGTATATGTTCTTTGGAAATGCATATGATTCTGCTCGAGTGACCTGGACTCCAATTTCATCTGTAGATGCCAAACATTACTCAGCAGGGCCAGCTGAACTTGTTTTTGGAGGAAGGAAAACCGGGGTTGGAAGTCTGACTGCTGTTTTTGACACTGGGAGTTCTTACACTTACTTCAACTCTCATGCTTACCAAGTACTACTTTCTTGGCTGAAGAAGGAATTAAGTGGAAAGCCCTTAAAATTAGCACCCGATGATCAGACTTTATCTCTCTGCTGGCACGGTAAAAGACCTTTCAAAAGCATACGTGAAGTAAAGAAATACTTCAAGCCTGTGACATTTAGTTTCACCCATGGTGGAAGAGTTAAAGCTCAATTTGAGATCCTTCCTGAAGGTTATCTGATAATATCGAACCTGGGAAATGTTTGTCTGGGCATTCTAAACGGCTCTGAAGTAGGGTTGGAGGAACTGAACCTAATTGGAGACATATCCATGCAAGACAAGGTGATGGTATTTGAAAATGAGAAACAATTGATCGGTTGGGAACCTGCAGATTGTAGCCGTGTTCTAAAATCCAGAGATATCAGTATTTGATCATATAAAGAAAAAGGCGTGTGCATAGGATTTGTAACATTAAGAGAATGATATAGTCCTGCAGTTTGTGGGGCGAAAGTACTATCATACTAATGTATGTTTGCTTGTGATTTGTGAATACAGCCTTGTGTTACATTCTCATTACCATTAGTCTAAATGTATTGCTGTGAGGAGTTAATTTAGAACTGAAAAGGTAAATATAATGCAAGTTGATTCAGTATGGATGTACGTCAACTATTCTGTAATTCTTTCGCCGGTAGATC 2053 0.4087 MMGKVVMVFAVMVLLNVSSCSAWFGNTHKNGRNSILPSETTSAWPRLSNPVGSSIVFPLYGNVYPVGFYNVTLNIGQPARPYFLDVDTGSDLTWLQCDAPCTHCSETPHPLYRPSNDFVPCRDPLCASLQPTEDYNCEHPDQCDYEINYADQYSTFGVLLNDVYLLNFTNGVQLKVRMALGCGYDQVFSPSSYHPLDGILGLGRGKASLISQLHSQGLVRNVIGHCLSSLGGGYMFFGNAYDSARVTWTPISSVDAKHYSAGPAELVFGGRKTGVGSLTAVFDTGSSYTYFNSHAYQVLLSWLKKELSGKPLKLAPDDQTLSLCWHGKRPFKSIREVKKYFKPVTFSFTHGGRVKAQFEILPEGYLIISNLGNVCLGILNGSEVGLEELNLIGDISMQDKVMVFENEKQLIGWEPADCSRVLKSRDISI 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01504 429 PANTHER ASPARTYL PROTEASES 50 412 IPR001461 GO:0004190|GO:0006508
Pste3g01504 429 Gene3D Acid Proteases 238 423 IPR021109 -
Pste3g01504 429 Gene3D Acid Proteases 48 237 IPR021109 -
Pste3g01504 429 Pfam Xylanase inhibitor N-terminal 69 239 IPR032861 -
Pste3g01504 429 FunFam Aspartyl protease family protein 46 239 - -
Pste3g01504 429 SUPERFAMILY Acid proteases 61 421 IPR021109 -
Pste3g01504 429 ProSiteProfiles Peptidase family A1 domain profile. 69 414 IPR033121 -
Pste3g01504 429 Pfam Xylanase inhibitor C-terminal 276 414 IPR032799 -
Pste3g01504 429 Coils Coil 427 429 - -
Pste3g01504 429 PRINTS Pepsin (A1) aspartic protease family signature 75 95 IPR001461 GO:0004190|GO:0006508
Pste3g01504 429 PRINTS Pepsin (A1) aspartic protease family signature 390 405 IPR001461 GO:0004190|GO:0006508
Pste3g01504 429 PRINTS Pepsin (A1) aspartic protease family signature 280 291 IPR001461 GO:0004190|GO:0006508
Pste3g01504 429 FunFam Aspartic proteinase Asp1 isoform A 242 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01504 Pste-Chr3 9303464 9307218 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01504 35 424 Miscellaneous Gene Families AT1G44130 50.254 7.21e-142 409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g01504 3 9303464 9307218 Pste3g01504 3 9303464 9307218 ECH
Pste3g01504 3 9303464 9307218 Pste2g00132 2 547625 548968 ECH