Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01480 ATGTTTTCAATACAGAGAAGGAAAAGAGGTGCTCCGGTCAGAATGCACTCAGTTGGCCCTCAAGTTCATCCTAGTAGCCAAGATGAAGACTATAATCTGAGGGAGATGGATCCACAGCTCGGTGGAGAACAATGGCCTAATGGCAGAAGAGTGTGGATGAGTGGTGGCGAAAGATTCACAAGCACACATGACCTTGTTGAGCAGATGTTCTATCTGTATGTTAGGGTGGTGAAAGCCAAAGATCTTTCCCCCAGCATTCTCACCTCAAGCTGTGATCCATACGTGGAAGTGAAGCTGGGGAATTATAAAGGAAGAACAAAGCACATAGAGAAGAAAACCAACCCAGAATGGAACCAAGTATATGCTTTCTCCAAAGACAGAATTCAATCTTCTGTTTTGGAAGTTATTGTGAAAGACAAAGATATGGTGGGAAGAGATGATTATATTGGAAGGGTGGCATTGGATCTAAACGAGGTTCCCACCAGAGTTCCCCCAGACAGTCCACTGGCTCCTCAATGGTACAGACTCGAGGACCGGCGAGGAGAAGGGAAGCTAAGGGGTGATATCATGCTTGCAGTCTGGATGGGAACTCAAGCTGATGAAGCCTTCTCAGAGGCATGGCATTCTGATGCTGCAACTGTGTATGGAGAGGGTGTTTTCAATGTCAGATCAAAGGTTTATGTGTCACCAAAATTATGGTATCTCAGAGTGGATGTCATTGAAGCACAAGATGTGATACCAAGTGACAGAAACCGGCTGCCAGAGGTTTTTGTTAAGGCTCAGATGGGAAGCCAAGTGTTGAGGACCAAGATATGTCCAACTAGAACCACCACACCCGTTTGGAATGAAGATTTGGTTTTAGTGGCAGCTGAGCCATTTGAGGAGATGTTGACAATAACTGTGGAGGATCGTGTGCATCCTTCAAAAGATGAAGTACTAGGGAAGATAAACTTGCCATTGACTCTTTTTGAGAAGCGGCTACACCACAGGCCAGTTCAATCGCGCTGGTTCAATCTTGAGAAGTTTGGTTTTGGAATGATGGAAGCTGATAGGCGAAATGAACTTAAATTTTCAAGCAGGATTCACCTAAGAATTTGCCTTGAAGGTGGATACCATGTCCTTGATGAGTCCACTTTGTACTCAAGTGACCAAAGGCCAACAGCTAGACAGCTATGGAAGCAGCCTATTGGAGTACTTGAAGTAGGCATCTTAGGAGCACAAGAACTCCTCCCAATGAAGATGAGGAATGGCCATGGCAGCACTGATGCATACTGTGTTGCTAAGTACGGCCAAAAATGGGTCAGAACCAGAACAATTCTTGACACCTTTAGTCCAAAATGGAATGAGCAATACACATGGGAGGTTTATGATCCTTGCACTGTAATAACACTTGGTGTTTTTGACAACTGCCATTTAGGTGGAGGGGAAAAAGCCGTTGCTGGCACTGCAGCAAGAGATTTAAGAATTGGAAAGGTAAGAATTAGGCTTTCAACCCTTGAAACTCATAGGATATACACTCATAGTTATCCACTTCTTGTTTTGCACCCACATGGTGTCAAGAAAATGGGTGAGCTTCAGCTAGCAGTGAGGTTCACTAGCCTCTCACTGGCTAACATGTTTTATATTTATGGCCAACCTTTGCTTCCCAAGGTGCATTACTTACGCCCTTTCACAGTTAACCAAGTAGAGAATTTGAGGTACCAAGCCATGAACATTGTGGCTGTGAGGCTTGGAAGAGCTGAACCTCCCCTCAGAAAGGAGGTAGTAGAGTACATGTTGGATGTTGATTCCCACATGTGGAGCATGAGAAGAAGCAAAGCCAACTTCTTTCGCATCATGTCACTTTTCTCTGGCATCATCACTATGGGGCAATGGTTTAGCCAAGTTAGCAATTGGAAGAACCCCATCACATCAGTCCTAGTTCACATTCTATTCCTGATACTCATTTGCTACCCTGAATTGATACTTCCAACTTTGTTCCTCTACATGTTCTTGATTGGTCTGTGGAACTATAGGTTTAGGCCTAGACATCCACTCCACATGGACATAAAACTGTCATGGGCAGAAGCAGTTCACCCTGATGAACTTGACGAAGAGTTTGACACTTTCCCAACTTCTAGATCAAATGATGTGGTGAGAATGAGGTATGACAGGCTTAGAAGTGTTGCAGGAAGGATTCAAACAGTTGTTGGGGACATAGCAACACAGGGAGAGAGGTTTCACTCTCTACTGAGTTGGAGAGACACCAGAGCCACCAGCCTCTTTATAGTGTTCAGCCTTTGTTCAGCCGTGGTTCTCTATGCAACACAGCCAAAAGTAGTGGCTATGGTAACAGGTTTGTATCATCTGCGCCATCCAAAATTTCGTAGCAAACTTCCTTCTGTACCCAGCAACTTCTTCAAGAGGCTTCCAGCTAGAACAGATAGCATGCTGTAA 2436 0.4458 MFSIQRRKRGAPVRMHSVGPQVHPSSQDEDYNLREMDPQLGGEQWPNGRRVWMSGGERFTSTHDLVEQMFYLYVRVVKAKDLSPSILTSSCDPYVEVKLGNYKGRTKHIEKKTNPEWNQVYAFSKDRIQSSVLEVIVKDKDMVGRDDYIGRVALDLNEVPTRVPPDSPLAPQWYRLEDRRGEGKLRGDIMLAVWMGTQADEAFSEAWHSDAATVYGEGVFNVRSKVYVSPKLWYLRVDVIEAQDVIPSDRNRLPEVFVKAQMGSQVLRTKICPTRTTTPVWNEDLVLVAAEPFEEMLTITVEDRVHPSKDEVLGKINLPLTLFEKRLHHRPVQSRWFNLEKFGFGMMEADRRNELKFSSRIHLRICLEGGYHVLDESTLYSSDQRPTARQLWKQPIGVLEVGILGAQELLPMKMRNGHGSTDAYCVAKYGQKWVRTRTILDTFSPKWNEQYTWEVYDPCTVITLGVFDNCHLGGGEKAVAGTAARDLRIGKVRIRLSTLETHRIYTHSYPLLVLHPHGVKKMGELQLAVRFTSLSLANMFYIYGQPLLPKVHYLRPFTVNQVENLRYQAMNIVAVRLGRAEPPLRKEVVEYMLDVDSHMWSMRRSKANFFRIMSLFSGIITMGQWFSQVSNWKNPITSVLVHILFLILICYPELILPTLFLYMFLIGLWNYRFRPRHPLHMDIKLSWAEAVHPDELDEEFDTFPTSRSNDVVRMRYDRLRSVAGRIQTVVGDIATQGERFHSLLSWRDTRATSLFIVFSLCSAVVLYATQPKVVAMVTGLYHLRHPKFRSKLPSVPSNFFKRLPARTDSML 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01480 811 CDD C2C_MCTP_PRT_plant 234 386 IPR047258 -
Pste3g01480 811 Gene3D C2 domain 67 213 IPR035892 -
Pste3g01480 811 MobiDBLite consensus disorder prediction 1 29 - -
Pste3g01480 811 CDD C2D_MCTP_PRT_plant 398 528 IPR047255 -
Pste3g01480 811 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 233 388 IPR035892 -
Pste3g01480 811 FunFam C2 domain-containing protein 380 535 - -
Pste3g01480 811 SMART C2_3c 398 508 IPR000008 -
Pste3g01480 811 SMART C2_3c 234 334 IPR000008 -
Pste3g01480 811 SMART C2_3c 71 168 IPR000008 -
Pste3g01480 811 ProSiteProfiles C2 domain profile. 380 509 IPR000008 -
Pste3g01480 811 Pfam Plant phosphoribosyltransferase C-terminal 656 811 IPR013583 -
Pste3g01480 811 ProSiteProfiles C2 domain profile. 214 337 IPR000008 -
Pste3g01480 811 FunFam C2 domain-containing protein 66 212 - -
Pste3g01480 811 ProSiteProfiles C2 domain profile. 53 174 IPR000008 -
Pste3g01480 811 PANTHER PHOSPHORIBOSYLANTHRANILATE TRANSFERASE ISOFORM 1 24 811 IPR047259 -
Pste3g01480 811 Pfam C2 domain 233 339 IPR000008 -
Pste3g01480 811 Pfam C2 domain 397 511 IPR000008 -
Pste3g01480 811 Pfam C2 domain 71 174 IPR000008 -
Pste3g01480 811 Gene3D C2 domain 379 535 IPR035892 -
Pste3g01480 811 Gene3D C2 domain 221 367 IPR035892 -
Pste3g01480 811 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 397 533 IPR035892 -
Pste3g01480 811 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 71 211 IPR035892 -
Pste3g01480 811 CDD C2B_MCTP_PRT_plant 71 197 IPR047257 -
Pste3g01480 811 FunFam C2 domain-containing protein 220 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01480 Pste-Chr3 9181738 9184173 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01480 1 811 Lipid Metabolism Gene Families AT5G48060 72.464 0.0 1249
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g00469 5 3057098 3059425 Pste3g01480 3 9181738 9184173 ECH
Pste4g00169 4 1425126 1429108 Pste3g01480 3 9181738 9184173 ECH
Pste3g01480 3 9181738 9184173 Pste3g01480 3 9181738 9184173 ECH