Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01451 ATGGCTTCTGTGCATGTGTTCCTCCTGTTAGCCACAGCCATTCTCGCCGCCGTGAGCTCCGCCGTGATCGGCTGCTCTTCGTCCGACAGGGCGGCGCTGCTCGCATTCCGGGAGGCTCTCAACGAGCCCTACCTCGGCCTCTTTGACTCATGGAAGGGCCCCGACTGCTGCCACGAATGGTACGGCGTCAGCTGCGACGCCACCACCGGCCGCGTCACCGATGTCAACCTCCGCGGCGAGTCCGAGGACCCGATTTTCGAGAAATCGGGCCGCTCCGGCTACATGACGGGAAAACTCTCGCCGGCGATTTGCGGCGTCGACACCCTCACCACCCTTGTTGTCGCCGACTGGAAGGATATCGCCGGCGAGATTCCCGCCTGTGTCACCGCCCTCTCCTCCCTCCGCATCCTCGACCTCATCGGCAACAGGCTCGCCGGCGAGATCCCCGCCGGCATTGGGAAACTCACCCGCCTCACCGTCCTCAACCTCGCCGACAACGCCCTCACCGGAAACATCCCACCATCAATCACCCAATTAAAGTCACTTAAACATCTCGACCTAACCAACAACCGAATCACGGGTGAGATTCCCAAAGAATTTAGAAATCTCAGCATGTTGAGTCGGTTACTGTTAGGTCGAAACCAGTTAACGGGTTCAATACCGGTTTCTATTTCTAAGATATACCGGCTCGCGGATCTTGACTTGTCCGCGAACCGGTTATCTGGATCAATCCCGTTTGAACTCGGGAAAATGCCAGTTCTTTCAACCCTAAATTTGGACAGTAACTCTTTTAAGGGGTTAATACCGTCAAGTTTGTTGAGTGCTTCGGGCATGGGCATTTTGAATCTTAGCCTAAACGGGTTTGAGGGATCCATACCCGATGTATTCGGGTCACACTCATATTTCATGGCTTTGGATTTGTCTCACAACAACTTAAAAGGTCGGGTACCCGGTTCATTGGCTTCGGCTAAATATATAGGGCATTTGGATCTTAGTCACAACCATTTGTGTGGATCCATTCCTCTTGGTGAACCCTTTGATCACCTTGAAGCGTCGTCGTTTAGTAACAATGATTGCTTGTGTGGGAACCCATTGAAGACTTGCTAG 1107 0.5357 MASVHVFLLLATAILAAVSSAVIGCSSSDRAALLAFREALNEPYLGLFDSWKGPDCCHEWYGVSCDATTGRVTDVNLRGESEDPIFEKSGRSGYMTGKLSPAICGVDTLTTLVVADWKDIAGEIPACVTALSSLRILDLIGNRLAGEIPAGIGKLTRLTVLNLADNALTGNIPPSITQLKSLKHLDLTNNRITGEIPKEFRNLSMLSRLLLGRNQLTGSIPVSISKIYRLADLDLSANRLSGSIPFELGKMPVLSTLNLDSNSFKGLIPSSLLSASGMGILNLSLNGFEGSIPDVFGSHSYFMALDLSHNNLKGRVPGSLASAKYIGHLDLSHNHLCGSIPLGEPFDHLEASSFSNNDCLCGNPLKTC 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01451 368 SMART LRR_typ_2 203 227 IPR003591 -
Pste3g01451 368 SMART LRR_typ_2 251 274 IPR003591 -
Pste3g01451 368 SMART LRR_typ_2 131 155 IPR003591 -
Pste3g01451 368 SMART LRR_typ_2 179 202 IPR003591 -
Pste3g01451 368 Pfam Leucine rich repeat N-terminal domain 27 66 IPR013210 -
Pste3g01451 368 PANTHER OS10G0469600 PROTEIN 182 270 - -
Pste3g01451 368 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 245 340 - -
Pste3g01451 368 ProSiteProfiles Leucine-rich repeat profile. 181 203 IPR001611 GO:0005515
Pste3g01451 368 SUPERFAMILY L domain-like 25 366 - -
Pste3g01451 368 Gene3D Ribonuclease Inhibitor 90 368 IPR032675 -
Pste3g01451 368 Gene3D Ribonuclease Inhibitor 21 89 IPR032675 -
Pste3g01451 368 Pfam Leucine rich repeat 157 216 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01451 Pste-Chr3 9001248 9002354 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01451 120 362 Receptor kinase-like Gene Family AT4G08850 37.860 1.25e-45 165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g01451 3 9001248 9002354 Pste3g01451 3 9001248 9002354 ECH
Pste3g01451 3 9001248 9002354 Pste1g02179 1 7059354 7065425 PCT