Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01419 AAAAAAATGGCAAATCTGGTTAATGCTGCAACAAGTGAGAAACTGGCTGAAACTGATTGGACGAAAAATATTGAAATCTGTGAATTAGTTTCTCATGATCAAAGGCAAGCTAGAGATGTTGTTAAAGCTATAAAAAAGAGACTAGGTAACAAGAACCCTAATACTCAACATTATGCAGTCTTGTTGCTCGAAATGTTGATGAACAATATTGGAGATTGTGTTCACCAGCAGAGTGCTGGGGTGAAATTTCCTCAAAGAGATCAAGTAACACAATCAAATCATCCTTCACAACTTAATAGAATTAAGGATGTATCTAATGGGGAGCAGGCCCCACCTAGACATCAGCAAGCTGAGTCCCAAACTATTCCTGAATCTAGCATTATTAAAAAGGCTAGTAATGCATTAGAAGTTTTAAAAGAAGTCCTTGATGCTATTGATGCCCAACATCCTCAGGCAGCAAGAGATGAATTCACCCTTGACCTTGTTGAACAGTGTTCATTTCAGAAGCAAAGGGTAATGCATCTTGTGATGACTTCTCGAGATGAAAGGATAATTTCTCAAGCAATTGAAATAAACGAGCAACTTCAGAAAGTTCTTGCAAGACATGACAACCTTCTTTCGTTGAGACCCCCAGCAACAGCTAATCACTTGGTATGTGAAGAAACAGAAGAGGAAGAAGAATTGGAACAGTTATTTAGGAGATTGCGCAAAGGAAAGGCTTGTGTCAGGCCAGAGGATGAAGTAAGTGAGCCTCAATTCCCTCACTTTGGTATGCTTGAAGAAAGACTCAACCGGCCGTTAATAAGACCTCTATCGTTGGAGCCATCTCGAGAAGCCAATACTTGTCCTGCACCTGCTGTGATTCCTCCTCACATGGCAATTCCACCGCCACCTTCAAAGCACATTGAAAGGGAGAGATATTTTCAGGAAAATAAAAAGGATGGTACTACTTTGGTTGGCCACTTGAGAGACCTCTCCTTGCACAGTCTCAATGGCAGCAGCTCTCACAGTGGAAGCTGTGATTTTAGTGATTGATCTCTGAATATAAGAACCTTTTTTCTTTTTCTTTTTTTAACTTTCTTTTTCTTCCTTCTTTGGTATTGGGAATTGAAGTTGATTTTTTTTATTTAGTCTTTATCTTTTGTTGGGTTGAGAGAGAAGGTTTACAAGCCTGCTTCAGTTTGGAAGAATGCATGTAATGTAGAGGAGTTTCGGAGATCATGTGCTATGAGACCCGATGTTTGGTAAGGTCCAGGTTCTA 1261 0.3981 KKMANLVNAATSEKLAETDWTKNIEICELVSHDQRQARDVVKAIKKRLGNKNPNTQHYAVLLLEMLMNNIGDCVHQQSAGVKFPQRDQVTQSNHPSQLNRIKDVSNGEQAPPRHQQAESQTIPESSIIKKASNALEVLKEVLDAIDAQHPQAARDEFTLDLVEQCSFQKQRVMHLVMTSRDERIISQAIEINEQLQKVLARHDNLLSLRPPATANHLVCEETEEEEELEQLFRRLRKGKACVRPEDEVSEPQFPHFGMLEERLNRPLIRPLSLEPSREANTCPAPAVIPPHMAIPPPPSKHIERERYFQENKKDGTTLVGHLRDLSLHSLNGSSSHSGSCDFSD 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01419 344 CDD GAT_GGA-like_plant 127 205 - -
Pste3g01419 344 SMART VHS_2 3 139 IPR002014 GO:0035091|GO:0043130
Pste3g01419 344 CDD VHS 3 86 - -
Pste3g01419 344 PANTHER TOM1-LIKE PROTEIN 78 242 IPR044836 GO:0035091|GO:0043130|GO:0043328
Pste3g01419 344 Pfam GAT domain 133 206 IPR004152 GO:0035091|GO:0043130
Pste3g01419 344 SUPERFAMILY GAT-like domain 91 206 - -
Pste3g01419 344 Coils Coil 128 148 - -
Pste3g01419 344 SUPERFAMILY ENTH/VHS domain 5 85 IPR008942 -
Pste3g01419 344 Gene3D - 117 216 IPR038425 -
Pste3g01419 344 ProSiteProfiles GAT domain profile. 119 207 IPR004152 GO:0035091|GO:0043130
Pste3g01419 344 Pfam VHS domain 3 86 IPR002014 GO:0035091|GO:0043130
Pste3g01419 344 MobiDBLite consensus disorder prediction 89 123 - -
Pste3g01419 344 Gene3D - 1 104 IPR008942 -
Pste3g01419 344 ProSiteProfiles VHS domain profile. 10 83 IPR002014 GO:0035091|GO:0043130
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01419 Pste-Chr3 8786941 8797749 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g01419 3 8786941 8797749 Pste3g01419 3 8786941 8797749 ECH
Pste3g01419 3 8786941 8797749 Pste2g00067 2 228087 235772 PCT