Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01353 CTTAAACTTAACTCCTTCTGGAGATTCCAAAATTCTCCACCCTCCGTTTCAGGGTTAGGGTTTCACCGTTACAGTTAAACATGGGACAACGAAAGCGAATCCCTCTCCGAATCTTTGCGGTGCTCCTCTTCATTTCTGCCTCCTCGTTTCAGGCTCTCCGCGCTTCCGATGACGCCATCTTCTACGACTCATTCGACGACGATTTTGAAGACCGTTGGATTGTGTCTCAGAAAGATGGCTATAGTGGTGTCTGGAAACATGCCAAGAGTGAGGGGCATGATGACTATGGGCTTCTTGTTAGTGAGAAAGCAAGGAAATATGCTATAGTTAAGGAACTTGATGAGATCGTGAATCTCAAGGGTGAAACAGTTGTTCTTCAGTTTGAAACTCGGCTTCAGAATGGTCTTGAATGTGGTGGTGCATATCTAAAATATCTCCGACCACAGGAGGCTGGATGGAAACCAAAGGAATTTGACAATGAATCTCCATATTCTATCATGTTTGGTCCTGACAAGTGCGGTGCCACAAACAAAGTACACTTCATTTTCAAACACAAGAATCCGAAGAGTGGGGAGTATGTTGAACACCATCTTAAGTATCCTCCTTCTCTTCCATCTGACAAATTATCTCACGTGTACACTGCCGTTTTGAAGTCAGACAATGAATTGCAAATTTTGATTGATGGGGAGCAGAAGAAGAAGGCAAACTTCTTATCTGCTGAGGATTTTGAACCTCCTCTTATCCCTTCCAAAACAATCCCAGATCCTGATGATAAGAAACCTGAGGACTGGGATGAAAGAGAGAAAATTCCAGACCCAAGTGCAGTAAAGCCAGATGACTGGGATGAGGATGCACCCTTGGAAATTGTTGATGAAGAAGCCGAAAAACCTGATGGATGGTTAGATGATGAACCTGAGGAGATTGATGATCCAGAGGCAACTAAACCAGAAGACTGGGACGATGAAGAGGATGGTGAATGGGAAGCCCCAAAGATTGTGAATCCCAAATGTGAAGCAGCCCCGGGTTGTGGTGAGTGGAAGAGGCCAATGAAGAGTAATCCTGCTTATAAAGGAAAATGGCATGCCCCACTTATTGAAAATCCTGCTTATAAGGGTATATGGAAGCCTCGGGATATTCCAAACCCTGACTACTTTGAACTTAAAAAACCTGATTTTGAGCCTATCGCTGCTATTGGTATTGAGATTTGGACAATGCAAGATGGCATATTGTTTGACAACATATTGATAGCTAAAGATGATAAAATTGCCGAGTCCTATCGGGAGACTACATGGAAGCCCAAGTTTACCGTTGAGAAAGAAAAACAGAAAGAAGAAGATCTGGAAACTGGAGCAAGTGGTCTTGCAGGCTTTCAGAAGAAGGTGTTTGACCTGTTATACAAGGTCGCAGACATTCCCTTCTTGAGTGCCTACAAGCTTAAAATATATGATATCATTGAGAACCTTGAAAAGCAACCAAACCTCACTGTTGGAATTCTTGTGGCCTTTGTGGTCGTCTTCGTGTCAATTTTCTTGAGGATCTTATTTGGGGGGAAGAAGCAGCCCGCGCAGGCAAGGGTGAAGAAGACAAACGTAGAACCCTCAGAAAGTTCGACGAGCCAAGGCAGTGGTGAAAATGAAGAAAACAAAGAGAAGGAGGAATCATCTGCTGCCCCTGCTCGTCGGAGGTCAACAAGGAGAGATAATTGAAATGATTGAAACTTTACAGGGGCGGCCATTGCAGAACACTACCGCACATAAATTTTGAGCTTAGTAGCACACTTTTACCTTTTCAAAGTTGATATGCATAAGGAGTGTAGATCAGAATCACATATTTTGTATCGTGCTGGCTACTTTGGAGACATTTTGTATTTTAAGCTTACAAATTGAGGCTGTACAATTACAATTACTTTTCTAGTAACGTAGCATAGAGAATCATGTTAAATTTTCACCACTAAACTAGAACCCTTTTCAGTACATGCGTGATCCTTAAAATATCCACATTGTGAATCTTGACTGCAATCAGGCAAAATCTTGCGAAATGCTATTCTATGAAATTTACTTTTGCTTGCA 2069 0.4234 MGQRKRIPLRIFAVLLFISASSFQALRASDDAIFYDSFDDDFEDRWIVSQKDGYSGVWKHAKSEGHDDYGLLVSEKARKYAIVKELDEIVNLKGETVVLQFETRLQNGLECGGAYLKYLRPQEAGWKPKEFDNESPYSIMFGPDKCGATNKVHFIFKHKNPKSGEYVEHHLKYPPSLPSDKLSHVYTAVLKSDNELQILIDGEQKKKANFLSAEDFEPPLIPSKTIPDPDDKKPEDWDEREKIPDPSAVKPDDWDEDAPLEIVDEEAEKPDGWLDDEPEEIDDPEATKPEDWDDEEDGEWEAPKIVNPKCEAAPGCGEWKRPMKSNPAYKGKWHAPLIENPAYKGIWKPRDIPNPDYFELKKPDFEPIAAIGIEIWTMQDGILFDNILIAKDDKIAESYRETTWKPKFTVEKEKQKEEDLETGASGLAGFQKKVFDLLYKVADIPFLSAYKLKIYDIIENLEKQPNLTVGILVAFVVVFVSIFLRILFGGKKQPAQARVKKTNVEPSESSTSQGSGENEENKEKEESSAAPARRRSTRRDN 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01353 541 Pfam Calreticulin family 34 389 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Pste3g01353 541 Gene3D Calreticulin/calnexin, P domain 219 363 IPR009033 GO:0005509|GO:0005515
Pste3g01353 541 ProSitePatterns Calreticulin family signature 1. 104 119 IPR018124 GO:0005509
Pste3g01353 541 PANTHER CALRETICULIN AND CALNEXIN 13 524 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Pste3g01353 541 Gene3D - 34 399 - -
Pste3g01353 541 MobiDBLite consensus disorder prediction 517 541 - -
Pste3g01353 541 MobiDBLite consensus disorder prediction 257 300 - -
Pste3g01353 541 MobiDBLite consensus disorder prediction 500 516 - -
Pste3g01353 541 SUPERFAMILY P-domain of calnexin/calreticulin 219 359 IPR009033 GO:0005509|GO:0005515
Pste3g01353 541 MobiDBLite consensus disorder prediction 211 300 - -
Pste3g01353 541 ProSitePatterns Calreticulin family repeated motif signature. 281 293 IPR018124 GO:0005509
Pste3g01353 541 FunFam Calnexin homolog 34 215 - -
Pste3g01353 541 ProSitePatterns Calreticulin family signature 2. 139 147 IPR018124 GO:0005509
Pste3g01353 541 MobiDBLite consensus disorder prediction 226 256 - -
Pste3g01353 541 PRINTS Calreticulin signature 135 151 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Pste3g01353 541 PRINTS Calreticulin signature 106 124 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Pste3g01353 541 PRINTS Calreticulin signature 370 390 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Pste3g01353 541 PRINTS Calreticulin signature 233 246 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Pste3g01353 541 PRINTS Calreticulin signature 338 357 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Pste3g01353 541 PRINTS Calreticulin signature 281 303 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Pste3g01353 541 FunFam Calnexin homolog 219 364 - -
Pste3g01353 541 MobiDBLite consensus disorder prediction 496 541 - -
Pste3g01353 541 SUPERFAMILY Concanavalin A-like lectins/glucanases 27 251 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01353 Pste-Chr3 8424209 8429074 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01353 3 541 Miscellaneous Gene Families AT5G61790 74.122 0.0 789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g01353 3 8424209 8429074 Pste3g01353 3 8424209 8429074 ECH